Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p01320 Brassica napus
A03p20140 Brassica napus
A04p27940 Brassica napus
A04p27950 Brassica napus
A05p09350 Brassica napus
A10p32430 Brassica napus
Aa31LG1G21550 Aethionema arabicum
Aa31LG5G21610 Aethionema arabicum
Actinidia08428 Actinidia chinensis
Actinidia10397 Actinidia chinensis
Actinidia31285 Actinidia chinensis
Ah.08g210850 Amaranthus hybridus
AL4G32600 Arabidopsis lyrata
AL6G13180 Arabidopsis lyrata
Aqoxy2G01359 Aquilegia oxysepala
Aqoxy4G02862 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FM4PU3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LG3GGS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UZ5M1P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W633S9 Arachis hypogaea
AT2G36420 Arabidopsis thaliana
AT5G03670 Arabidopsis thaliana
ATR0757G071 Amborella trichopoda
Atru.chr8.1615 Acer truncatum
AUR62033551 Chenopodium quinoa
AUR62043111 Chenopodium quinoa
BcaB01g03837 Brassica carinata
BcaB01g05795 Brassica carinata
BcaB01g05809 Brassica carinata
BcaB02g09354 Brassica carinata
BcaB06g28940 Brassica carinata
BcaC01g05657 Brassica carinata
BcaC02g07593 Brassica carinata
BcaC02g11759 Brassica carinata
BcaC06g32076 Brassica carinata
BolC3t12719H Brassica oleracea
BolC3t14754H Brassica oleracea
BolC4t22814H Brassica oleracea
BolC4t28026H Brassica oleracea
BolC9t60060H Brassica oleracea
BraA03t09512Z Brassica rapa
BraA03t11264Z Brassica rapa
BraA04t18284Z Brassica rapa
BraA05t19893Z Brassica rapa
BraA10t45283Z Brassica rapa
C03p01670 Brassica napus
C03p23590 Brassica napus
C04p11650 Brassica napus
C09p73250 Brassica napus
CAN.G824.15 Capsicum annuum
CARHR130720 Cardamine hirsuta
CARHR209630 Cardamine hirsuta
Carub.0004s1823 Capsella rubella
Carub.0006s0258 Capsella rubella
Ca_08971_v3 Cicer arietinum L.
Ca_11631_v3 Cicer arietinum L.
Cc06_g05360 Coffea canephora
CDE04G1167 Ceratophyllum demersum
CDE04G2014 Ceratophyllum demersum
Cfa016557 Carpinus fangiana
Ciclev10011456m.g Citrus clementina
CiPaw.09G009600 Carya illinoinensis
CiPaw.10G006300 Carya illinoinensis
ClCG04G009820 Citrullus lanatus
ClCG10G019240 Citrullus lanatus
COL.COLO4_13286 Corchorus olitorius
COL.COLO4_29799 Corchorus olitorius
Cpa.g.sc5.65 Carica papaya
CsaV3_3G036950 Cucumis sativus L.
CsaV3_6G040450 Cucumis sativus L.
CSS0002533 Camellia sinensis var. sinensis
DCAR_007743 Daucus carota
DCAR_013367 Daucus carota
DCAR_020774 Daucus carota
Dinv19839 Davidia involucrata
Dinv21244 Davidia involucrata
Duzib093G1418 Durio zibethinus
Duzib106G1512 Durio zibethinus
Duzib128G0159 Durio zibethinus
ECA238G4534 Erigeron canadensis
ECA248G2160 Erigeron canadensis
EL10Ac7g16972 Beta vulgaris
Eucgr.A01536 Eucalyptus grandis
Eucgr.K02068 Eucalyptus grandis
FAN02G1693 Fragaria x ananassa
FAN05G0153 Fragaria x ananassa
FAN05G0444 Fragaria x ananassa
FAN09G2203 Fragaria x ananassa
FAN14G1728 Fragaria x ananassa
FvH4_6g18100 Fragaria vesca
Glyma.03G192000 Glycine max
Glyma.10G067100 Glycine max
Glyma.13G152100 Glycine max
Glyma.19G192500 Glycine max
Gohir.A01G138700 Gossypium hirsutum
Gohir.A01G208100 Gossypium hirsutum
Gohir.A09G136100 Gossypium hirsutum
Gohir.D01G128400 Gossypium hirsutum
Gohir.D01G197500 Gossypium hirsutum
Gohir.D09G137200 Gossypium hirsutum
Gorai.002G159100 Gossypium raimondii
Gorai.002G241600 Gossypium raimondii
Gorai.006G157500 Gossypium raimondii
GSVIVG01033797001 Vitis vinifera
HanXRQChr01g0028981 Helianthus annuus
HanXRQChr11g0351271 Helianthus annuus
HanXRQChr11g0351281 Helianthus annuus
Haze_19558 Corylus avellana
Hma1.2p1_0084F.1_g043350 Hydrangea macrophylla
Lalb_Chr01g0018291 Lupinus albus
Lalb_Chr02g0155221 Lupinus albus
Lalb_Chr20g0112141 Lupinus albus
Lalb_Chr21g0315611 Lupinus albus
Lj1g0007531 Lotus japonicus
Lj2A130G48 Lonicera japonica
Lj5g0007324 Lotus japonicus
Lsat_1_v5_gn_1_48761 Lactuca sativa
Lsat_1_v5_gn_2_20881 Lactuca sativa
Manes.08G022100 Manihot esculenta
Manes.09G058764 Manihot esculenta
MBI01_g18815_MAGBIO Magnolia biondii
MBI01_g46563_MAGBIO Magnolia biondii
MBI17_g01908_MAGBIO Magnolia biondii
MD12G1019500 Malus domestica
MD14G1017300 Malus domestica
Medtr1g060890 Medicago truncatula
MELO3C000161.2 Cucumis melo
MELO3C024521.2 Cucumis melo
Migut.J00977 Erythranthe guttata
Migut.L01764 Erythranthe guttata
MSTRG.10354 Avicennia marina
MSTRG.26648 Avicennia marina
MSTRG.5814 Avicennia marina
Nitab4.5_0000132g0120 Nicotiana tabacum
Nitab4.5_0003454g0060 Nicotiana tabacum
Nitab4.5_0004489g0010 Nicotiana tabacum
Nn2g14048 Nelumbo nucifera
Nn6g35018 Nelumbo nucifera
Oeu032419.1 Olea europaea
Oeu040530.1 Olea europaea
Oeu040808.2 Olea europaea
Peaxi162Scf00068g00085 Petunia axillaris
PGR004G2186 Punica granatum
PGR142G1952 Punica granatum
PGSC0003DMG400002678 Solanum tuberosum
PGSC0003DMG400028260 Solanum tuberosum
Phvul.001G187300 Phaseolus vulgaris
Phvul.007G222400 Phaseolus vulgaris
Potri.006G115300 Populus trichocarpa
Prupe.7G115800 Prunus persica
Psat3g035000 Pisum sativum
Psat6g080680 Pisum sativum
PSO012G0001 Papaver somniferum
PSO339G0389 Papaver somniferum
PSO384G0133 Papaver somniferum
QL07p040106 Quercus lobata
RcHm_v2.0_Chr3g0472371 Rosa chinensis
Rhsim03G0079600 Rhododendron simsii
Rhsim04G0135000 Rhododendron simsii
Sabra06G0090200 Salix brachista
SalBow3G3191 Salvia bowleyana
SalBow5G3755 Salvia bowleyana
Sc02g0001100 Simmondsia chinensis
Sed0007624 Sechium edule
Sed0013820 Sechium edule
Sed0015592 Sechium edule
Sed0026564 Sechium edule
SEGI_19816 Sequoiadendron giganteum
SGA_v2.0_scaffold184G39942 Striga asiatica
SGA_v2.0_scaffold40G15384 Striga asiatica
Solyc09g009220.4 Solanum lycopersicum
Solyc10g083530.2 Solanum lycopersicum
Sopen09g003950 Solanum pennellii
Sopen10g033000 Solanum pennellii
Sp4g18720 Schrenkiella parvula
Sp6g39060 Schrenkiella parvula
TAR369G0025 Trochodendron aralioides
TAR623G1754 Trochodendron aralioides
THA.LOC104805079 Tarenaya hassleriana
THA.LOC104816367 Tarenaya hassleriana
THA.LOC104823464 Tarenaya hassleriana
THA.LOC104826931 Tarenaya hassleriana
Thecc.05G083100 Theobroma cacao
Thhalv10016054m.g Eutrema salsugineum
TPR.G25373 Trifolium pratense
TPR.G5671 Trifolium pratense
TWI53G1381 Tripterygium wilfordii
TWI74G0849 Tripterygium wilfordii
TWI77G0029 Tripterygium wilfordii
unitig_26.g9244 Utricularia gibba
unitig_578.g15766 Utricularia gibba
unitig_8.g4144 Utricularia gibba
vmacro07380 Vaccinium macrocarpon
vmacro08822 Vaccinium macrocarpon
VMungo0720G2646 Vigna mungo
VMungo1383G1455 Vigna mungo

User provided reference genes

Program Settings