Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p40080 Brassica napus
A06p35580 Brassica napus
Aa31LG11G4020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3217 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis
Actinidia14155 Actinidia chinensis
AL6G36450 Arabidopsis lyrata
Aqoxy7G02727 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea
AT5G24810 Arabidopsis thaliana
ATR0626G323 Amborella trichopoda
Atru.chr7.2677 Acer truncatum
AUR62040898 Chenopodium quinoa
BcaB07g29924 Brassica carinata
BcaC03g17943 Brassica carinata
BcaNung01256 Brassica carinata
BolC2t12059H Brassica oleracea
BolC7t44825H Brassica oleracea
BraA02t08971Z Brassica rapa
BraA06t26483Z Brassica rapa
C02p60040 Brassica napus
C07p42960 Brassica napus
CAN.G195.3 Capsicum annuum
CANSAT25G1343 Cannabis sativa
CARHR188650 Cardamine hirsuta
Carub.0006s2266 Capsella rubella
Ca_12826_v3 Cicer arietinum L.
CBR_g24186 Chara braunii
CBR_g4189 Chara braunii
Cc00_g11230 Coffea canephora
CDE05G0655 Ceratophyllum demersum
CDE05G2143 Ceratophyllum demersum
Cfa013321 Carpinus fangiana
Cfa024898 Carpinus fangiana
Ciclev10007354m.g Citrus clementina
CiPaw.07G208900 Carya illinoinensis
ClCG11G013930 Citrullus lanatus
COL.COLO4_18622 Corchorus olitorius
COL.COLO4_18624 Corchorus olitorius
Cpa.g.sc328.6 Carica papaya
CsaV3_3G047320 Cucumis sativus L.
CSS0039275 Camellia sinensis var. sinensis
DCAR_004550 Daucus carota
Dinv11875 Davidia involucrata
Duzib168G0916 Durio zibethinus
ECA233G2479 Erigeron canadensis
ECA240G0557 Erigeron canadensis
ECA240G0756 Erigeron canadensis
ECA240G1043 Erigeron canadensis
ECA240G1890 Erigeron canadensis
ECA240G1915 Erigeron canadensis
ECA240G2186 Erigeron canadensis
ECA240G2590 Erigeron canadensis
ECA240G3793 Erigeron canadensis
ECA240G4147 Erigeron canadensis
EL10Ac2g03705 Beta vulgaris
Eucgr.C03989 Eucalyptus grandis
FAN15G0261 Fragaria x ananassa
FAN20G1504 Fragaria x ananassa
FAN27G0167 Fragaria x ananassa
FvH4_2g36370 Fragaria vesca
FvH4_2g36372 Fragaria vesca
Glyma.14G139800 Glycine max
Glyma.17G188300 Glycine max
Gohir.A05G066000 Gossypium hirsutum
Gohir.D05G068400 Gossypium hirsutum
Gorai.009G069300 Gossypium raimondii
GSVIVG01035556001 Vitis vinifera
HanXRQChr03g0081371 Helianthus annuus
HanXRQChr03g0082871 Helianthus annuus
HanXRQChr03g0082881 Helianthus annuus
HanXRQChr13g0407961 Helianthus annuus
HanXRQChr13g0411821 Helianthus annuus
HanXRQChr13g0411841 Helianthus annuus
HanXRQChr13g0411981 Helianthus annuus
HanXRQChr13g0411991 Helianthus annuus
HanXRQChr13g0412001 Helianthus annuus
HanXRQChr13g0412011 Helianthus annuus
Haze_21707 Corylus avellana
Haze_21807 Corylus avellana
Haze_21808 Corylus avellana
HPP92_015798 Vanilla planifolia
HPP92_015810 Vanilla planifolia
Hund03269 Selenicereus undatus
Hund03270 Selenicereus undatus
Hund19390 Selenicereus undatus
Lalb_Chr14g0362391 Lupinus albus
Lalb_Chr22g0361011 Lupinus albus
Lalb_Chr22g0361021 Lupinus albus
Lj1g0006594 Lotus japonicus
Lj7C753G1 Lonicera japonica
Lsat_1_v5_gn_5_58361 Lactuca sativa
Lsat_1_v5_gn_5_58881 Lactuca sativa
Lsat_1_v5_gn_5_58921 Lactuca sativa
Lsat_1_v5_gn_5_59000 Lactuca sativa
Lsat_1_v5_gn_5_60320 Lactuca sativa
Lsat_1_v5_gn_5_60340 Lactuca sativa
Lsat_1_v5_gn_5_60380 Lactuca sativa
Lsat_1_v5_gn_5_60400 Lactuca sativa
Lsat_1_v5_gn_5_60420 Lactuca sativa
Lsat_1_v5_gn_5_60480 Lactuca sativa
Lsat_1_v5_gn_5_60580 Lactuca sativa
Lsat_1_v5_gn_6_15541 Lactuca sativa
Lsat_1_v5_gn_7_104720 Lactuca sativa
Manes.03G001800 Manihot esculenta
Manes.16G137200 Manihot esculenta
Mapoly0007s0194 Marchantia polymorpha
MBI13_g31548_MAGBIO Magnolia biondii
MD08G1123100 Malus domestica
MD15G1100800 Malus domestica
MD15G1101900 Malus domestica
MD15G1102000 Malus domestica
MD15G1102100 Malus domestica
Medtr1g008980 Medicago truncatula
MELO3C003597.2 Cucumis melo
MELO3C014367.2 Cucumis melo
MELO3C031142.2 Cucumis melo
Migut.A00459 Erythranthe guttata
MSTRG.11822 Avicennia marina
Nitab4.5_0000502g0210 Nicotiana tabacum
Nitab4.5_0000919g0060 Nicotiana tabacum
Nitab4.5_0000970g0010 Nicotiana tabacum
Nn8g40986 Nelumbo nucifera
Oeu059293.1 Olea europaea
Oeu059294.1 Olea europaea
Os06g0701300 Oryza sativa ssp. japonica
Peaxi162Scf00213g01025 Petunia axillaris
PGR044G0156 Punica granatum
PGSC0003DMG400029592 Solanum tuberosum
Phvul.001G077100 Phaseolus vulgaris
Potri.006G276600 Populus trichocarpa
Potri.012G082950 Populus trichocarpa
Potri.018G000101 Populus trichocarpa
Potri.018G003400 Populus trichocarpa
Potri.018G003600 Populus trichocarpa
Potri.018G004500 Populus trichocarpa
Pp3c16_18060 Physcomitrium patens
Pp3c5_19100 Physcomitrium patens
Prupe.1G455100 Prunus persica
Psat6g006000 Pisum sativum
PSO058G0001 Papaver somniferum
PSO423G0073 Papaver somniferum
PSO596G0002 Papaver somniferum
PSO755G0001 Papaver somniferum
PSO832G2792 Papaver somniferum
QL04p096777 Quercus lobata
QL12p026010 Quercus lobata
RcHm_v2.0_Chr6g0305511 Rosa chinensis
Rhsim03G0037500 Rhododendron simsii
Rhsim07G0170800 Rhododendron simsii
Sabra06G0214300 Salix brachista
Sabra18G0002200 Salix brachista
Sabra18G0005800 Salix brachista
Sabra18G0007800 Salix brachista
Sabra18G0008800 Salix brachista
Sabra18G0009100 Salix brachista
Sabra18G0010300 Salix brachista
Sabra18G0012600 Salix brachista
SalBow4G3081 Salvia bowleyana
Sc14g0002010 Simmondsia chinensis
Sed0005804 Sechium edule
SEGI_02165 Sequoiadendron giganteum
SEGI_04035 Sequoiadendron giganteum
SEGI_08227 Sequoiadendron giganteum
SEGI_11287 Sequoiadendron giganteum
SEGI_20762 Sequoiadendron giganteum
SEGI_21174 Sequoiadendron giganteum
SEGI_21352 Sequoiadendron giganteum
SEGI_21411 Sequoiadendron giganteum
SEGI_21512 Sequoiadendron giganteum
SEGI_26295 Sequoiadendron giganteum
SEGI_28596 Sequoiadendron giganteum
SEGI_30314 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11648 Striga asiatica
SMO353G0164 Selaginella moellendorffii
SMO353G0165 Selaginella moellendorffii
Solyc08g074280.4 Solanum lycopersicum
Sopen08g022930 Solanum pennellii
Sp2g22640 Schrenkiella parvula
TAR506G0002 Trochodendron aralioides
TAR626G0827 Trochodendron aralioides
THA.LOC104814963 Tarenaya hassleriana
Thecc.09G004000 Theobroma cacao
Thecc.09G004100 Theobroma cacao
Thhalv10003586m.g Eutrema salsugineum
TPR.G12040 Trifolium pratense
TPR.G13196 Trifolium pratense
TPR.G18873 Trifolium pratense
TWI32G0788 Tripterygium wilfordii
TWI34G0517 Tripterygium wilfordii
unitig_92.g28144 Utricularia gibba
vmacro05099 Vaccinium macrocarpon
vmacro05100 Vaccinium macrocarpon
VMungo0647G1298 Vigna mungo
Zm00001eb272880 Zea mays

User provided reference genes

Program Settings