Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p39790 Brassica napus
A06p38150 Brassica napus
A09p05020 Brassica napus
Aa31LG11G8510 Aethionema arabicum
Aa31LG5G14900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1714 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1715 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1748 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1749 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2023 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2742 Anthoceros agrestis
Actinidia38934 Actinidia chinensis
Actinidia38935 Actinidia chinensis
AL6G40940 Arabidopsis lyrata
Aqoxy2G03708 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F06EBP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K8P0T6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T51LW4 Arachis hypogaea
AT5G28910 Arabidopsis thaliana
AT5G28960 Arabidopsis thaliana
ATR0736G092 Amborella trichopoda
Atru.chr2.997 Acer truncatum
Atru.chr2.998 Acer truncatum
AUR62004830 Chenopodium quinoa
AUR62040917 Chenopodium quinoa
BcaB04g19636 Brassica carinata
BcaC04g23717 Brassica carinata
BcaC06g30691 Brassica carinata
BcaNung02115 Brassica carinata
BcaNung02116 Brassica carinata
BolC7t44541H Brassica oleracea
BolC7t44543H Brassica oleracea
BolC7t44544H Brassica oleracea
BolC9t53472H Brassica oleracea
BraA06t26728Z Brassica rapa
BraA09t36141Z Brassica rapa
C07p40060 Brassica napus
C07p40070 Brassica napus
C07p40080 Brassica napus
C09p05430 Brassica napus
CAN.G24.3 Capsicum annuum
CANSAT54G3011 Cannabis sativa
CARHR185420 Cardamine hirsuta
Carub.0006s2613 Capsella rubella
Carub.0006s2614 Capsella rubella
Carub.0006s2615 Capsella rubella
Carub.0007s3766 Capsella rubella
Carub.0048s0001 Capsella rubella
Ca_09457_v3 Cicer arietinum L.
Ca_10021_v3 Cicer arietinum L.
Ca_29585_v3 Cicer arietinum L.
CBR_g1013 Chara braunii
CBR_g23900 Chara braunii
CBR_g34948 Chara braunii
CBR_g40386 Chara braunii
CBR_g48364 Chara braunii
CBR_g48367 Chara braunii
CBR_g57532 Chara braunii
Cc02_g08740 Coffea canephora
CDE08G1169 Ceratophyllum demersum
Cfa006361 Carpinus fangiana
Ciclev10019419m.g Citrus clementina
CiPaw.07G073400 Carya illinoinensis
ClCG11G010530 Citrullus lanatus
COL.COLO4_15495 Corchorus olitorius
Cpa.g.sc306.6 Carica papaya
CsaV3_2G009860 Cucumis sativus L.
CSS0019381 Camellia sinensis var. sinensis
DCAR_030014 Daucus carota
DCAR_030022 Daucus carota
DCAR_030978 Daucus carota
Dinv15516 Davidia involucrata
Dinv25278 Davidia involucrata
Duzib128G0977 Durio zibethinus
Duzib177G0657 Durio zibethinus
ECA238G4809 Erigeron canadensis
EL10Ac4g08995 Beta vulgaris
Eucgr.B02152 Eucalyptus grandis
Eucgr.B02153 Eucalyptus grandis
Eucgr.B02425 Eucalyptus grandis
FAN02G1417 Fragaria x ananassa
FAN05G0941 Fragaria x ananassa
FAN05G2419 Fragaria x ananassa
FAN09G4673 Fragaria x ananassa
FAN14G1733 Fragaria x ananassa
FAN14G5108 Fragaria x ananassa
FvH4_6g01760 Fragaria vesca
Glyma.03G250300 Glycine max
Glyma.10G165600 Glycine max
Glyma.19G247901 Glycine max
Glyma.20G223600 Glycine max
Gohir.A11G246500 Gossypium hirsutum
Gohir.D11G256800 Gossypium hirsutum
Gorai.007G275200 Gossypium raimondii
GSVIVG01023448001 Vitis vinifera
GSVIVG01023451001 Vitis vinifera
HanXRQChr14g0454231 Helianthus annuus
Haze_04416 Corylus avellana
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla
HPP92_020845 Vanilla planifolia
HPP92_028131 Vanilla planifolia
Lalb_Chr02g0149051 Lupinus albus
Lalb_Chr06g0168251 Lupinus albus
Lj2C44G25 Lonicera japonica
Lj3g0009325 Lotus japonicus
Lj5g0017612 Lotus japonicus
Lsat_1_v5_gn_2_108280 Lactuca sativa
Manes.08G140000 Manihot esculenta
MBI07_g22622_MAGBIO Magnolia biondii
MBI07_g26633_MAGBIO Magnolia biondii
MBI07_g31076_MAGBIO Magnolia biondii
MD04G1231000 Malus domestica
MD12G1249300 Malus domestica
Medtr1g080320 Medicago truncatula
Medtr7g115570 Medicago truncatula
MELO3C008699.2 Cucumis melo
Migut.F01540 Erythranthe guttata
MSTRG.314 Avicennia marina
MSTRG.8227 Avicennia marina
Nitab4.5_0001913g0170 Nicotiana tabacum
Nitab4.5_0011129g0030 Nicotiana tabacum
Nn1g02856 Nelumbo nucifera
Oeu014528.1 Olea europaea
Oeu014529.1 Olea europaea
Os02g0809500 Oryza sativa ssp. japonica
Peaxi162Scf00718g00014 Petunia axillaris
PGR142G0316 Punica granatum
PGSC0003DMG400028063 Solanum tuberosum
Phvul.L001660 Phaseolus vulgaris
Potri.013G047600 Populus trichocarpa
Potri.019G019800 Populus trichocarpa
Prupe.6G350700 Prunus persica
Psat3g006840 Pisum sativum
Psat6g143640 Pisum sativum
PSO017G4386 Papaver somniferum
PSO063G4417 Papaver somniferum
QL03p029857 Quercus lobata
RcHm_v2.0_Chr3g0449501 Rosa chinensis
Rhsim09G0135200 Rhododendron simsii
Rhsim09G0135600 Rhododendron simsii
Rhsim09G0136000 Rhododendron simsii
Rhsim09G0136100 Rhododendron simsii
Rhsim09G0136200 Rhododendron simsii
Rhsim09G0136300 Rhododendron simsii
Rhsim09G0136400 Rhododendron simsii
Rhsim09G0136500 Rhododendron simsii
Rhsim09G0136600 Rhododendron simsii
RhsimUnG0083500 Rhododendron simsii
RhsimUnG0155700 Rhododendron simsii
Sabra13G0043500 Salix brachista
Sabra19G0032100 Salix brachista
SalBow6G1341 Salvia bowleyana
Sc20g0000670 Simmondsia chinensis
Sed0013546 Sechium edule
SEGI_25367 Sequoiadendron giganteum
SEGI_25988 Sequoiadendron giganteum
SEGI_32914 Sequoiadendron giganteum
SGA_v2.0_scaffold158G37441 Striga asiatica
SGA_v2.0_scaffold158G37446 Striga asiatica
SGA_v2.0_scaffold18G08388 Striga asiatica
SGA_v2.0_scaffold26G11350 Striga asiatica
SGA_v2.0_scaffold2G01010 Striga asiatica
SGA_v2.0_scaffold90G27648 Striga asiatica
SMO116G0126 Selaginella moellendorffii
SMO145G0097 Selaginella moellendorffii
SMO232G0001 Selaginella moellendorffii
SMO232G0037 Selaginella moellendorffii
SMO232G0114 Selaginella moellendorffii
SMO232G0128 Selaginella moellendorffii
SMO232G0138 Selaginella moellendorffii
SMO235G0055 Selaginella moellendorffii
SMO241G0001 Selaginella moellendorffii
SMO241G0005 Selaginella moellendorffii
SMO241G0014 Selaginella moellendorffii
SMO241G0018 Selaginella moellendorffii
SMO241G0019 Selaginella moellendorffii
SMO347G0181 Selaginella moellendorffii
SMO347G0649 Selaginella moellendorffii
SMO351G0042 Selaginella moellendorffii
SMO351G0391 Selaginella moellendorffii
Solyc06g036640.4 Solanum lycopersicum
Sopen06g012690 Solanum pennellii
Sp2g19990 Schrenkiella parvula
TAR362G0719 Trochodendron aralioides
THA.LOC104820771 Tarenaya hassleriana
Thecc.05G270100 Theobroma cacao
Thhalv10003947m.g Eutrema salsugineum
TPR.G22327 Trifolium pratense
TPR.G6958 Trifolium pratense
TWI36G0550 Tripterygium wilfordii
TWI56G1190 Tripterygium wilfordii
unitig_749.g14016 Utricularia gibba
unitig_749.g14017 Utricularia gibba
vmacro10372 Vaccinium macrocarpon
VMungo0720G0613 Vigna mungo

User provided reference genes

Program Settings