Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19700 Brassica napus
A03p58000 Brassica napus
A08p20140 Brassica napus
Aa31LG2G22160 Aethionema arabicum
Aa31LG8G17580 Aethionema arabicum
Actinidia11034 Actinidia chinensis
Actinidia27530 Actinidia chinensis
Actinidia30471 Actinidia chinensis
Actinidia30472 Actinidia chinensis
Actinidia39316 Actinidia chinensis
Ah.01g004270 Amaranthus hybridus
Ah.01g015160 Amaranthus hybridus
AL7G24300 Arabidopsis lyrata
Aqoxy1G02431 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.07PP75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4CC3R7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BN612E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8XF3U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU4N3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4SHUS Arachis hypogaea
AT4G28300 Arabidopsis thaliana
ATR0730G025 Amborella trichopoda
Atru.chr6.2995 Acer truncatum
AUR62037355 Chenopodium quinoa
AUR62042594 Chenopodium quinoa
BcaB01g02220 Brassica carinata
BcaB02g09194 Brassica carinata
BcaB03g12565 Brassica carinata
BcaC06g32629 Brassica carinata
BcaC07g38323 Brassica carinata
BcaC09g50493 Brassica carinata
BcaNung01578 Brassica carinata
BcaNung01581 Brassica carinata
BolC1t02425H Brassica oleracea
BolC7t46087H Brassica oleracea
BolC8t48752H Brassica oleracea
BraA01t01903Z Brassica rapa
BraA03t14863Z Brassica rapa
BraA08t33973Z Brassica rapa
C01p24780 Brassica napus
C07p56120 Brassica napus
C08p10780 Brassica napus
CAN.G248.6 Capsicum annuum
CAN.G248.8 Capsicum annuum
CAN.G578.3 Capsicum annuum
CANSAT78G0723 Cannabis sativa
CARHR236010 Cardamine hirsuta
Carub.0007s1245 Capsella rubella
Ca_20058_v3 Cicer arietinum L.
Cc05_g07150 Coffea canephora
CDE02G3861 Ceratophyllum demersum
CDE09G0847 Ceratophyllum demersum
Cfa014615 Carpinus fangiana
Ciclev10014791m.g Citrus clementina
CiPaw.03G177100 Carya illinoinensis
CiPaw.04G125900 Carya illinoinensis
ClCG07G002900 Citrullus lanatus
COL.COLO4_30185 Corchorus olitorius
Cpa.g.sc34.163 Carica papaya
CsaV3_7G004430 Cucumis sativus L.
CsaV3_7G004440 Cucumis sativus L.
CSS0002020 Camellia sinensis var. sinensis
CSS0028918 Camellia sinensis var. sinensis
CSS0029588 Camellia sinensis var. sinensis
DCAR_009747 Daucus carota
DCAR_013008 Daucus carota
DCAR_021243 Daucus carota
Dinv23639 Davidia involucrata
Dinv26416 Davidia involucrata
Duzib052G1215 Durio zibethinus
Duzib248G1053 Durio zibethinus
ECA233G0926 Erigeron canadensis
EL10Ac9g20766 Beta vulgaris
Eucgr.A01820 Eucalyptus grandis
Eucgr.K01026 Eucalyptus grandis
FAN02G0849 Fragaria x ananassa
FAN05G5282 Fragaria x ananassa
FAN09G2249 Fragaria x ananassa
FvH4_6g26191 Fragaria vesca
Glyma.06G292800 Glycine max
Glyma.12G113200 Glycine max
Glyma.12G204300 Glycine max
Glyma.13G297200 Glycine max
Gohir.A03G156700 Gossypium hirsutum
Gohir.A04G103700 Gossypium hirsutum
Gohir.D02G179900 Gossypium hirsutum
Gohir.D04G143400 Gossypium hirsutum
Gorai.005G201600 Gossypium raimondii
Gorai.012G128800 Gossypium raimondii
GSVIVG01020546001 Vitis vinifera
HanXRQChr17g0555151 Helianthus annuus
HanXRQChr17g0555161 Helianthus annuus
Haze_13161 Corylus avellana
Hma1.2p1_0002F.1_g001880 Hydrangea macrophylla
Hma1.2p1_1145F.1_g261390 Hydrangea macrophylla
Hma1.2p1_1937F.1_g308290 Hydrangea macrophylla
HPP92_009657 Vanilla planifolia
HPP92_009658 Vanilla planifolia
HPP92_009690 Vanilla planifolia
HPP92_021318 Vanilla planifolia
Hund07928 Selenicereus undatus
Lalb_Chr01g0005221 Lupinus albus
Lalb_Chr03g0029461 Lupinus albus
Lalb_Chr14g0366921 Lupinus albus
Lalb_Chr19g0135271 Lupinus albus
Lalb_Chr22g0356551 Lupinus albus
Lj1C722T7 Lonicera japonica
Lj3g0013524 Lotus japonicus
Lj3g0015070 Lotus japonicus
Lj3g0026741 Lotus japonicus
Lj8A112T23 Lonicera japonica
Lsat_1_v5_gn_4_66480 Lactuca sativa
Manes.12G089408 Manihot esculenta
Manes.13G146700 Manihot esculenta
MBI06_g06474_MAGBIO Magnolia biondii
MBI07_g32653_MAGBIO Magnolia biondii
MD09G1247500 Malus domestica
MD17G1240400 Malus domestica
Medtr0004s0130 Medicago truncatula
Medtr2g090360 Medicago truncatula
MELO3C018735.2 Cucumis melo
MELO3C018736.2 Cucumis melo
Migut.H01185 Erythranthe guttata
Nitab4.5_0000512g0030 Nicotiana tabacum
Nitab4.5_0000585g0140 Nicotiana tabacum
Nitab4.5_0004071g0030 Nicotiana tabacum
Nitab4.5_0009473g0010 Nicotiana tabacum
Nn1g06557 Nelumbo nucifera
Oeu017967.1 Olea europaea
Oeu019136.1 Olea europaea
Oeu035059.1 Olea europaea
Os01g0672800 Oryza sativa ssp. japonica
Os01g0754500 Oryza sativa ssp. japonica
Os05g0561600 Oryza sativa ssp. japonica
Peaxi162Scf00059g01919 Petunia axillaris
Peaxi162Scf00132g00014 Petunia axillaris
Peaxi162Scf00132g00112 Petunia axillaris
PGR142G4061 Punica granatum
PGSC0003DMG400013142 Solanum tuberosum
PGSC0003DMG400018344 Solanum tuberosum
Phvul.005G103700 Phaseolus vulgaris
Phvul.011G113900 Phaseolus vulgaris
Potri.013G131600 Populus trichocarpa
Potri.019G095400 Populus trichocarpa
Prupe.3G137800 Prunus persica
Prupe.6G316300 Prunus persica
Psat0s2154g0040 Pisum sativum
Psat5g272160 Pisum sativum
Psat7g157560 Pisum sativum
PSO541G1782 Papaver somniferum
PSO675G4165 Papaver somniferum
QL08p038723 Quercus lobata
QL12p027254 Quercus lobata
RcHm_v2.0_Chr2g0126471 Rosa chinensis
Rhsim04G0068400 Rhododendron simsii
Sabra13G0111100 Salix brachista
Sabra19G0107700 Salix brachista
SalBow1G7059 Salvia bowleyana
SalBow6G5870 Salvia bowleyana
Sc12g0003080 Simmondsia chinensis
Sc21g0002870 Simmondsia chinensis
Sed0003246 Sechium edule
Sed0014275 Sechium edule
Sed0017020 Sechium edule
Sed0018356 Sechium edule
SEGI_03496 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31130 Striga asiatica
SHI10410 Sapria himalayana
Solyc07g053990.4 Solanum lycopersicum
Solyc10g008340.4 Solanum lycopersicum
Sopen07g027980 Solanum pennellii
Sopen10g004200 Solanum pennellii
Sp7g26260 Schrenkiella parvula
TAR624G0242 Trochodendron aralioides
TAR626G1575 Trochodendron aralioides
THA.LOC104814505 Tarenaya hassleriana
Thecc.02G179600 Theobroma cacao
Thhalv10024987m.g Eutrema salsugineum
TPR.G9833 Trifolium pratense
TWI18G1388 Tripterygium wilfordii
TWI36G1500 Tripterygium wilfordii
TWI75G0143 Tripterygium wilfordii
unitig_26.g9951 Utricularia gibba
unitig_578.g16769 Utricularia gibba
unitig_578.g16770 Utricularia gibba
unitig_578.g16771 Utricularia gibba
vmacro09283 Vaccinium macrocarpon
VMungo1080G0374 Vigna mungo
VMungo1127G1228 Vigna mungo
Zm00001eb031060 Zea mays
Zm00001eb031070 Zea mays
Zm00001eb157130 Zea mays
Zm00001eb295740 Zea mays
Zm00001eb343620 Zea mays
Zm00001eb360020 Zea mays
Zm00001eb370790 Zea mays

User provided reference genes

Program Settings