Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p30320 Brassica napus
A06p03720 Brassica napus
A08p03730 Brassica napus
Aa31LG10G4340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1554 Anthoceros agrestis
Actinidia00437 Actinidia chinensis
Actinidia12946 Actinidia chinensis
Actinidia27958 Actinidia chinensis
Ah.01g006670 Amaranthus hybridus
AL1G57120 Arabidopsis lyrata
AL1G57150 Arabidopsis lyrata
AL3G32680 Arabidopsis lyrata
Aqoxy6G01316 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5RT47R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PPSU1J Arachis hypogaea
AT1G49710 Arabidopsis thaliana
AT3G19280 Arabidopsis thaliana
ATR0009G025 Amborella trichopoda
Atru.chr5.2693 Acer truncatum
AUR62011449 Chenopodium quinoa
AUR62016610 Chenopodium quinoa
BcaB04g17304 Brassica carinata
BcaB07g33651 Brassica carinata
BcaC05g28503 Brassica carinata
BcaC07g37019 Brassica carinata
BcaC08g43160 Brassica carinata
BolC5t33305H Brassica oleracea
BolC6t35578H Brassica oleracea
BolC8t47184H Brassica oleracea
BraA05t21870Z Brassica rapa
BraA06t23577Z Brassica rapa
BraA08t32401Z Brassica rapa
C05p45870 Brassica napus
C06p04480 Brassica napus
C08p03860 Brassica napus
C08p03870 Brassica napus
CAN.G1041.31 Capsicum annuum
CAN.G1707.1 Capsicum annuum
CANSAT25G3338 Cannabis sativa
CANSAT25G3355 Cannabis sativa
CARHR039740 Cardamine hirsuta
CARHR094680 Cardamine hirsuta
Carub.0001s3892 Capsella rubella
Carub.0003s1911 Capsella rubella
Ca_18690_v3 Cicer arietinum L.
CBR_g30510 Chara braunii
CBR_g39363 Chara braunii
CBR_g40329 Chara braunii
Cc02_g18830 Coffea canephora
CDE06G1279 Ceratophyllum demersum
CDE08G0952 Ceratophyllum demersum
CDE08G1252 Ceratophyllum demersum
CDE08G1667 Ceratophyllum demersum
Cfa004534 Carpinus fangiana
Ciclev10028212m.g Citrus clementina
CiPaw.05G007600 Carya illinoinensis
ClCG02G005960 Citrullus lanatus
ClCG05G010040 Citrullus lanatus
COL.COLO4_32649 Corchorus olitorius
COL.COLO4_32743 Corchorus olitorius
Cpa.g.sc51.4 Carica papaya
Cpa.g.sc62.7 Carica papaya
Cre18.g749697 Chlamydomonas reinhardtii
CsaV3_3G018500 Cucumis sativus L.
CsaV3_7G008560 Cucumis sativus L.
CSS0040219 Camellia sinensis var. sinensis
CSS0046899 Camellia sinensis var. sinensis
DCAR_019244 Daucus carota
DCAR_022021 Daucus carota
DCAR_029059 Daucus carota
Dinv15715 Davidia involucrata
Dinv42161 Davidia involucrata
Duzib052G0281 Durio zibethinus
Duzib132G0231 Durio zibethinus
EL10Ac9g21840 Beta vulgaris
Eucgr.I01147 Eucalyptus grandis
FAN15G0414 Fragaria x ananassa
FAN20G2338 Fragaria x ananassa
FAN27G0960 Fragaria x ananassa
FvH4_2g05930 Fragaria vesca
Glyma.02G131900 Glycine max
Glyma.07G212900 Glycine max
Gohir.A01G007100 Gossypium hirsutum
Gohir.A12G024000 Gossypium hirsutum
Gohir.A13G040700 Gossypium hirsutum
Gohir.D01G007200 Gossypium hirsutum
Gohir.D12G024600 Gossypium hirsutum
Gohir.D13G039400 Gossypium hirsutum
Gohir.D13G039450 Gossypium hirsutum
Gorai.002G008200 Gossypium raimondii
Gorai.008G024900 Gossypium raimondii
Gorai.013G044300 Gossypium raimondii
GSVIVG01031736001 Vitis vinifera
HanXRQChr03g0075811 Helianthus annuus
HanXRQChr04g0128181 Helianthus annuus
HanXRQChr09g0260741 Helianthus annuus
HanXRQChr16g0497621 Helianthus annuus
Haze_10093 Corylus avellana
Hma1.2p1_0474F.1_g160420 Hydrangea macrophylla
HPP92_013117 Vanilla planifolia
HPP92_013118 Vanilla planifolia
Hund00338 Selenicereus undatus
Hund06174 Selenicereus undatus
Lalb_Chr05g0219201 Lupinus albus
Lalb_Chr09g0328341 Lupinus albus
Lalb_Chr16g0384751 Lupinus albus
Lj4g0026387 Lotus japonicus
Lj5A209T84 Lonicera japonica
Lj9C358T1 Lonicera japonica
Lsat_1_v5_gn_4_10380 Lactuca sativa
Lsat_1_v5_gn_5_112540 Lactuca sativa
Lsat_1_v5_gn_7_86701 Lactuca sativa
Lsat_1_v5_gn_9_109780 Lactuca sativa
Manes.07G078000 Manihot esculenta
Mapoly0164s0009 Marchantia polymorpha
MBI03_g13465_MAGBIO Magnolia biondii
MD05G1081600 Malus domestica
MD10G1094900 Malus domestica
Medtr4g086010 Medicago truncatula
MELO3C014990.2 Cucumis melo
MELO3C018453.2 Cucumis melo
MELO3C019516.2 Cucumis melo
MELO3C019684.2 Cucumis melo
Migut.B00352 Erythranthe guttata
Nitab4.5_0002543g0080 Nicotiana tabacum
Nitab4.5_0003080g0100 Nicotiana tabacum
Nitab4.5_0003503g0030 Nicotiana tabacum
Nitab4.5_0007480g0040 Nicotiana tabacum
Nn1g04851 Nelumbo nucifera
Nn5g30308 Nelumbo nucifera
Oeu010591.2 Olea europaea
Oeu025579.1 Olea europaea
Os08g0472600 Oryza sativa ssp. japonica
Peaxi162Scf00003g02335 Petunia axillaris
Peaxi162Scf00016g01955 Petunia axillaris
PGR142G0601 Punica granatum
PGSC0003DMG400025789 Solanum tuberosum
PGSC0003DMG401006223 Solanum tuberosum
PGSC0003DMG402006223 Solanum tuberosum
Phvul.003G292000 Phaseolus vulgaris
Potri.009G101500 Populus trichocarpa
Potri.019G091200 Populus trichocarpa
Pp3c11_22030 Physcomitrium patens
Prupe.3G008400 Prunus persica
Prupe.8G126200 Prunus persica
Psat1g011840 Pisum sativum
Psat7g125480 Pisum sativum
PSO017G1556 Papaver somniferum
PSO017G2240 Papaver somniferum
PSO017G6777 Papaver somniferum
PSO339G2242 Papaver somniferum
PSO339G3128 Papaver somniferum
PSO357G0329 Papaver somniferum
PSO478G1926 Papaver somniferum
PSO541G4994 Papaver somniferum
PSO675G3714 Papaver somniferum
QL11p035291 Quercus lobata
QL11p035314 Quercus lobata
RcHm_v2.0_Chr6g0257471 Rosa chinensis
Rhsim05G0084700 Rhododendron simsii
Sabra09G0077300 Salix brachista
SalBow6G3816 Salvia bowleyana
Sc18g0004110 Simmondsia chinensis
Sed0008599 Sechium edule
Sed0016548 Sechium edule
SEGI_41455 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27641 Striga asiatica
SHI05356 Sapria himalayana
SMO367G1219 Selaginella moellendorffii
Solyc01g108110.4 Solanum lycopersicum
Solyc10g050230.3 Solanum lycopersicum
Sopen01g050340 Solanum pennellii
Sopen10g021410 Solanum pennellii
Sp1g36600 Schrenkiella parvula
Sp3g17360 Schrenkiella parvula
TAR381G0440 Trochodendron aralioides
TAR625G0342 Trochodendron aralioides
THA.LOC104798796 Tarenaya hassleriana
THA.LOC104803455 Tarenaya hassleriana
Thecc.02G101300 Theobroma cacao
Thhalv10011402m.g Eutrema salsugineum
Thhalv10022257m.g Eutrema salsugineum
TPR.G25433 Trifolium pratense
TPR.G31059 Trifolium pratense
TWI31G0519 Tripterygium wilfordii
TWI79G0501 Tripterygium wilfordii
unitig_744.g24234 Utricularia gibba
vmacro19503 Vaccinium macrocarpon
VMungo0251G1706 Vigna mungo
VMungo0251G3162 Vigna mungo
Zm00001eb026360 Zea mays
Zm00001eb026370 Zea mays
Zm00001eb038040 Zea mays
Zm00001eb176710 Zea mays
Zm00001eb202280 Zea mays
Zm00001eb355460 Zea mays

User provided reference genes

Program Settings