Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p39860 Brassica napus
Aa31LG4G4310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3359 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.89 Anthoceros agrestis
Actinidia01422 Actinidia chinensis
Actinidia18966 Actinidia chinensis
Actinidia27195 Actinidia chinensis
Actinidia35059 Actinidia chinensis
AL2G33830 Arabidopsis lyrata
Aqoxy3G00588 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8883SE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJ4MYC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MSU6B8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9YTQ9 Arachis hypogaea
AT1G73990 Arabidopsis thaliana
ATR0559G066 Amborella trichopoda
ATR0691G062 Amborella trichopoda
ATR0691G201 Amborella trichopoda
Atru.chr9.644 Acer truncatum
AUR62032156 Chenopodium quinoa
AUR62036912 Chenopodium quinoa
AUR62039689 Chenopodium quinoa
AUR62044517 Chenopodium quinoa
BcaC08g46829 Brassica carinata
BolC6t39846H Brassica oleracea
BraA07t31532Z Brassica rapa
C06p48090 Brassica napus
CAN.G982.30 Capsicum annuum
CANSAT80G0024 Cannabis sativa
CARHR067120 Cardamine hirsuta
Carub.0002s2077 Capsella rubella
Ca_02712_v3 Cicer arietinum L.
Ca_21746_v3 Cicer arietinum L.
Ca_29346_v3 Cicer arietinum L.
Ca_29357_v3 Cicer arietinum L.
CBR_g31190 Chara braunii
Cc00_g05440 Coffea canephora
Cc04_g07970 Coffea canephora
CDE06G1115 Ceratophyllum demersum
Cfa017727 Carpinus fangiana
Cfa017729 Carpinus fangiana
Ciclev10019214m.g Citrus clementina
CiPaw.15G117200 Carya illinoinensis
ClCG06G015340 Citrullus lanatus
COL.COLO4_01124 Corchorus olitorius
COL.COLO4_28809 Corchorus olitorius
Cpa.g.sc3.203 Carica papaya
Cre06.g251550 Chlamydomonas reinhardtii
Cre06.g267700 Chlamydomonas reinhardtii
Cre10.g444550 Chlamydomonas reinhardtii
CsaV3_1G003220 Cucumis sativus L.
CSS0003044 Camellia sinensis var. sinensis
CSS0013858 Camellia sinensis var. sinensis
CSS0028580 Camellia sinensis var. sinensis
CSS0029569 Camellia sinensis var. sinensis
CSS0030762 Camellia sinensis var. sinensis
CSS0035896 Camellia sinensis var. sinensis
CSS0043104 Camellia sinensis var. sinensis
CSS0043461 Camellia sinensis var. sinensis
CSS0043842 Camellia sinensis var. sinensis
CSS0048759 Camellia sinensis var. sinensis
DCAR_010190 Daucus carota
Dinv36836 Davidia involucrata
Dinv38623 Davidia involucrata
Duzib084G0277 Durio zibethinus
Duzib205G0393 Durio zibethinus
Duzib205G0774 Durio zibethinus
ECA233G4504 Erigeron canadensis
ECA233G4583 Erigeron canadensis
ECA236G4192 Erigeron canadensis
ECA246G0130 Erigeron canadensis
ECA246G4431 Erigeron canadensis
EL10Ac5g11203 Beta vulgaris
Eucgr.K02831 Eucalyptus grandis
FAN08G2364 Fragaria x ananassa
FAN13G0008 Fragaria x ananassa
FAN18G1062 Fragaria x ananassa
FAN18G1391 Fragaria x ananassa
FvH4_5g13110 Fragaria vesca
FvH4_5g13111 Fragaria vesca
FvH4_5g13112 Fragaria vesca
Glyma.04G158100 Glycine max
Glyma.05G017301 Glycine max
Glyma.06G207100 Glycine max
Glyma.17G082700 Glycine max
Gohir.A09G244100 Gossypium hirsutum
Gohir.D09G245000 Gossypium hirsutum
Gorai.006G269300 Gossypium raimondii
GSVIVG01008177001 Vitis vinifera
GSVIVG01008179001 Vitis vinifera
GSVIVG01008180001 Vitis vinifera
HanXRQChr05g0157841 Helianthus annuus
HanXRQChr05g0157881 Helianthus annuus
HanXRQChr05g0157891 Helianthus annuus
HanXRQChr09g0240321 Helianthus annuus
HanXRQChr09g0240811 Helianthus annuus
Haze_18545 Corylus avellana
Hma1.2p1_0744F.1_g211701 Hydrangea macrophylla
HPP92_017961 Vanilla planifolia
Hund02540 Selenicereus undatus
Hund09973 Selenicereus undatus
Lalb_Chr12g0197421 Lupinus albus
Lalb_Chr23g0274061 Lupinus albus
Lj1g0015888 Lotus japonicus
Lj4g0004217 Lotus japonicus
Lj5A138T59 Lonicera japonica
Lsat_1_v5_gn_5_24441 Lactuca sativa
Lsat_1_v5_gn_5_24760 Lactuca sativa
Lsat_1_v5_gn_5_24941 Lactuca sativa
Manes.01G024300 Manihot esculenta
Mapoly0008s0093 Marchantia polymorpha
MCO10G272 Micromonas commoda
MD06G1207100 Malus domestica
MD14G1217600 Malus domestica
Medtr2g058970 Medicago truncatula
Medtr4g112820 Medicago truncatula
Medtr4g112860 Medicago truncatula
Medtr4g114810 Medicago truncatula
Medtr4g123500 Medicago truncatula
Medtr4g130360 Medicago truncatula
Medtr4g130550 Medicago truncatula
Medtr4g134260 Medicago truncatula
Medtr5g025810 Medicago truncatula
Medtr5g082990 Medicago truncatula
Medtr5g083090 Medicago truncatula
Medtr5g083100 Medicago truncatula
Medtr8g022470 Medicago truncatula
Medtr8g022500 Medicago truncatula
MELO3C017261.2 Cucumis melo
Migut.D01480 Erythranthe guttata
Migut.D01481 Erythranthe guttata
MSTRG.4505 Avicennia marina
MSTRG.9572 Avicennia marina
Nitab4.5_0000646g0270 Nicotiana tabacum
Nitab4.5_0002805g0140 Nicotiana tabacum
Nn4g23600 Nelumbo nucifera
Oeu012971.1 Olea europaea
Oeu031925.1 Olea europaea
Oeu031926.1 Olea europaea
Os02g0728100 Oryza sativa ssp. japonica
Peaxi162Scf00017g03131 Petunia axillaris
PGR083G2784 Punica granatum
PGSC0003DMG401024517 Solanum tuberosum
Phvul.003G181400 Phaseolus vulgaris
Phvul.009G204100 Phaseolus vulgaris
Potri.015G047500 Populus trichocarpa
Pp3c3_13550 Physcomitrium patens
Pp3c3_13555 Physcomitrium patens
PRCOL_00001689 Prasinoderma coloniale
PRCOL_00006545 Prasinoderma coloniale
PRCOL_00006673 Prasinoderma coloniale
Prupe.5G211500 Prunus persica
Psat1g028640 Pisum sativum
Psat4g045480 Pisum sativum
PSO017G3345 Papaver somniferum
PSO478G2116 Papaver somniferum
QL10p021433 Quercus lobata
QL10p021440 Quercus lobata
QL10p021514 Quercus lobata
RcHm_v2.0_Chr2g0126491 Rosa chinensis
RcHm_v2.0_Chr2g0152701 Rosa chinensis
RcHm_v2.0_Chr3g0495421 Rosa chinensis
RcHm_v2.0_Chr6g0264331 Rosa chinensis
RcHm_v2.0_Chr6g0264341 Rosa chinensis
RcHm_v2.0_Chr6g0264351 Rosa chinensis
RcHm_v2.0_Chr7g0184031 Rosa chinensis
RcHm_v2.0_Chr7g0184041 Rosa chinensis
Rhsim03G0020500 Rhododendron simsii
Rhsim08G0140500 Rhododendron simsii
Rhsim12G0146800 Rhododendron simsii
Sabra15G0079500 Salix brachista
SalBow1G4644 Salvia bowleyana
SalBow1G8183 Salvia bowleyana
Sc24g0002690 Simmondsia chinensis
Sed0016449 Sechium edule
SEGI_03657 Sequoiadendron giganteum
SEGI_21155 Sequoiadendron giganteum
SGA_v2.0_scaffold171G38939 Striga asiatica
SMO147G0360 Selaginella moellendorffii
Solyc03g114640.4 Solanum lycopersicum
Sopen03g033710 Solanum pennellii
Sp5g29190 Schrenkiella parvula
TAR371G0026 Trochodendron aralioides
THA.LOC104812124 Tarenaya hassleriana
Thecc.03G111900 Theobroma cacao
Thhalv10018225m.g Eutrema salsugineum
TPR.G15309 Trifolium pratense
TPR.G1988 Trifolium pratense
TPR.G2020 Trifolium pratense
TPR.G35192 Trifolium pratense
TWI81G0217 Tripterygium wilfordii
unitig_22.g6154 Utricularia gibba
unitig_749.g14105 Utricularia gibba
unitig_749.g14106 Utricularia gibba
vmacro16468 Vaccinium macrocarpon
VMungo1215G0716 Vigna mungo
Zm00001eb189850 Zea mays

User provided reference genes

Program Settings