Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p19870 Brassica napus
Aa31sc76G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5632 Anthoceros agrestis
Actinidia14639 Actinidia chinensis
Actinidia14640 Actinidia chinensis
Actinidia15711 Actinidia chinensis
Actinidia15712 Actinidia chinensis
Ah.12g063310 Amaranthus hybridus
AL4G17180 Arabidopsis lyrata
AL4G17190 Arabidopsis lyrata
AL4G17260 Arabidopsis lyrata
Aqoxy7G01835 Aquilegia oxysepala
Aqoxy7G02104 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3VS957 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4R6GA4 Arachis hypogaea
AT2G25660 Arabidopsis thaliana
ATR0037G074 Amborella trichopoda
Atru.chr7.2323 Acer truncatum
AUR62011223 Chenopodium quinoa
AUR62024833 Chenopodium quinoa
AUR62032384 Chenopodium quinoa
BcaB06g28084 Brassica carinata
BcaC02g08333 Brassica carinata
BolC4t27084H Brassica oleracea
BraA04t17575Z Brassica rapa
C04p55600 Brassica napus
CAN.G21.14 Capsicum annuum
CANSAT01G0438 Cannabis sativa
CARHR115590 Cardamine hirsuta
Carub.0004s0545 Capsella rubella
Ca_12907_v3 Cicer arietinum L.
Ca_15696_v3 Cicer arietinum L.
CBR_g20101 Chara braunii
Cc08_g08280 Coffea canephora
CDE07G0137 Ceratophyllum demersum
CDE07G1701 Ceratophyllum demersum
Cfa013212 Carpinus fangiana
Cfa013213 Carpinus fangiana
Ciclev10007226m.g Citrus clementina
CiPaw.07G217500 Carya illinoinensis
CiPaw.07G217600 Carya illinoinensis
ClCG05G017220 Citrullus lanatus
COL.COLO4_24068 Corchorus olitorius
Cpa.g.c45312 Carica papaya
Cpa.g.sc91.7 Carica papaya
Cpa.g.sc91.8 Carica papaya
Cre05.g243150 Chlamydomonas reinhardtii
CsaV3_3G046700 Cucumis sativus L.
CSS0003133 Camellia sinensis var. sinensis
DCAR_006261 Daucus carota
Dinv30215 Davidia involucrata
Dinv35880 Davidia involucrata
Duzib150G1527 Durio zibethinus
Duzib168G0147 Durio zibethinus
ECA240G1832 Erigeron canadensis
EL10Ac2g02534 Beta vulgaris
EL10Ac2g02535 Beta vulgaris
Eucgr.C02859 Eucalyptus grandis
FAN13G3191 Fragaria x ananassa
FAN15G0070 Fragaria x ananassa
FAN20G1067 Fragaria x ananassa
FAN24G1347 Fragaria x ananassa
FAN27G2808 Fragaria x ananassa
FvH4_2g30180 Fragaria vesca
Glyma.04G072400 Glycine max
Glyma.06G073700 Glycine max
Glyma.14G129400 Glycine max
Glyma.14G129500 Glycine max
Glyma.17G204000 Glycine max
Gohir.A05G010700 Gossypium hirsutum
Gohir.A06G048100 Gossypium hirsutum
Gohir.D01G114000 Gossypium hirsutum
Gohir.D05G011400 Gossypium hirsutum
Gohir.D06G048050 Gossypium hirsutum
Gohir.D06G048151 Gossypium hirsutum
Gohir.D10G105800 Gossypium hirsutum
Gohir.D13G142100 Gossypium hirsutum
Gorai.009G011800 Gossypium raimondii
Gorai.010G053900 Gossypium raimondii
Gorai.013G159000 Gossypium raimondii
GSVIVG01035727001 Vitis vinifera
HanXRQChr08g0221141 Helianthus annuus
Haze_21625 Corylus avellana
Hma1.2p1_0175F.1_g077280 Hydrangea macrophylla
HPP92_015152 Vanilla planifolia
HPP92_015177 Vanilla planifolia
HPP92_015178 Vanilla planifolia
Hund03002 Selenicereus undatus
Hund28667 Selenicereus undatus
Hund28681 Selenicereus undatus
Lalb_Chr11g0063991 Lupinus albus
Lj1g0021913 Lotus japonicus
Lj5g0000879 Lotus japonicus
Lj7C712G2 Lonicera japonica
Lj7C712G4 Lonicera japonica
Lsat_1_v5_gn_0_34461 Lactuca sativa
Lsat_1_v5_gn_2_27900 Lactuca sativa
Lsat_1_v5_gn_3_11400 Lactuca sativa
Lsat_1_v5_gn_3_38460 Lactuca sativa
Lsat_1_v5_gn_4_41661 Lactuca sativa
Lsat_1_v5_gn_4_58000 Lactuca sativa
Lsat_1_v5_gn_4_90040 Lactuca sativa
Lsat_1_v5_gn_5_111480 Lactuca sativa
Lsat_1_v5_gn_5_45581 Lactuca sativa
Lsat_1_v5_gn_8_141060 Lactuca sativa
Lsat_1_v5_gn_9_113440 Lactuca sativa
Lsat_1_v5_gn_9_113480 Lactuca sativa
Lsat_1_v5_gn_9_53361 Lactuca sativa
Lsat_1_v5_gn_9_53460 Lactuca sativa
Lsat_1_v5_gn_9_70541 Lactuca sativa
Manes.13G069700 Manihot esculenta
Mapoly0004s0170 Marchantia polymorpha
MBI03_g45443_MAGBIO Magnolia biondii
MBI15_g06358_MAGBIO Magnolia biondii
MBI17_g21606_MAGBIO Magnolia biondii
MBI19_g30558_MAGBIO Magnolia biondii
MCO11G459 Micromonas commoda
MD08G1135800 Malus domestica
MD15G1115000 Malus domestica
MD15G1115200 Malus domestica
Medtr1g010300 Medicago truncatula
Medtr3g108080 Medicago truncatula
MELO3C003666.2 Cucumis melo
Migut.A00272 Erythranthe guttata
Nitab4.5_0000125g0120 Nicotiana tabacum
Nitab4.5_0000125g0130 Nicotiana tabacum
Nitab4.5_0009600g0020 Nicotiana tabacum
Nitab4.5_0009600g0030 Nicotiana tabacum
Nn2g11834 Nelumbo nucifera
Nn7g37266 Nelumbo nucifera
Oeu019417.3 Olea europaea
Os01g0179400 Oryza sativa ssp. japonica
Peaxi162Scf00105g00133 Petunia axillaris
Peaxi162Scf00105g01315 Petunia axillaris
Peaxi162Scf00105g01316 Petunia axillaris
PGR044G2079 Punica granatum
Phvul.001G055800 Phaseolus vulgaris
Phvul.009G098100 Phaseolus vulgaris
Potri.006G246401 Populus trichocarpa
Potri.018G034700 Populus trichocarpa
Pp3c4_150 Physcomitrium patens
Prupe.1G466400 Prunus persica
Psat5g027760 Pisum sativum
Psat6g031040 Pisum sativum
PSO063G5065 Papaver somniferum
PSO782G2185 Papaver somniferum
QL12p031223 Quercus lobata
RcHm_v2.0_Chr1g0381071 Rosa chinensis
RcHm_v2.0_Chr4g0412921 Rosa chinensis
RcHm_v2.0_Chr6g0312731 Rosa chinensis
Rhsim07G0154200 Rhododendron simsii
Sabra18G0035400 Salix brachista
Sabra18G0035500 Salix brachista
SalBow4G0560 Salvia bowleyana
Sc09g0008870 Simmondsia chinensis
Sed0017351 Sechium edule
SEGI_09564 Sequoiadendron giganteum
SEGI_10354 Sequoiadendron giganteum
SEGI_12849 Sequoiadendron giganteum
SEGI_20580 Sequoiadendron giganteum
SEGI_30777 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11498 Striga asiatica
SMO347G0057 Selaginella moellendorffii
Solyc08g067860.2 Solanum lycopersicum
Solyc08g067870.2 Solanum lycopersicum
Sopen08g021790 Solanum pennellii
Sp4g05280 Schrenkiella parvula
TAR383G0906 Trochodendron aralioides
THA.LOC104819890 Tarenaya hassleriana
Thecc.09G143900 Theobroma cacao
Thhalv10000008m.g Eutrema salsugineum
TPR.G20094 Trifolium pratense
TPR.G27605 Trifolium pratense
TPR.G34693 Trifolium pratense
TWI34G1710 Tripterygium wilfordii
unitig_747.g21880 Utricularia gibba
vmacro05447 Vaccinium macrocarpon
VMungo0251G0588 Vigna mungo
VMungo0251G2090 Vigna mungo
VMungo0251G3267 Vigna mungo
VMungo0331G1137 Vigna mungo
VMungo0647G0881 Vigna mungo
VMungo0647G1896 Vigna mungo
VMungo0647G2469 Vigna mungo
VMungo0647G2587 Vigna mungo
VMungo0720G0309 Vigna mungo
VMungo0720G1320 Vigna mungo
VMungo1127G0457 Vigna mungo
VMungo1127G1644 Vigna mungo
VMungo1127G1956 Vigna mungo
VMungo1215G0452 Vigna mungo
VMungo1309G0474 Vigna mungo
VMungo1309G1485 Vigna mungo
VMungo1383G0427 Vigna mungo
Zm00001eb088480 Zea mays
Zm00001eb122270 Zea mays
Zm00001eb305240 Zea mays

User provided reference genes

Program Settings