Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32180 Brassica napus
A09p00470 Brassica napus
Aa31LG1G11050 Aethionema arabicum
Aa31LG5G530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2569 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2570 Anthoceros agrestis
Actinidia10010 Actinidia chinensis
Actinidia20904 Actinidia chinensis
Actinidia25173 Actinidia chinensis
Ah.05g180610 Amaranthus hybridus
AL6G53010 Arabidopsis lyrata
Aqoxy7G00308 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H3LZVP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0BX7Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9PB4Q Arachis hypogaea
AT4G00450 Arabidopsis thaliana
ATR0680G344 Amborella trichopoda
Atru.chr5.495 Acer truncatum
Atru.chr5.496 Acer truncatum
Atru.chr5.497 Acer truncatum
AUR62004357 Chenopodium quinoa
AUR62022565 Chenopodium quinoa
BcaB01g02164 Brassica carinata
BcaB01g02251 Brassica carinata
BcaC01g06879 Brassica carinata
BcaC04g24169 Brassica carinata
BolC3t16192H Brassica oleracea
BolC9t52974H Brassica oleracea
BraA03t12388Z Brassica rapa
BraA09t35713Z Brassica rapa
C03p39210 Brassica napus
C09p00390 Brassica napus
CAN.G78.79 Capsicum annuum
CANSAT56G1950 Cannabis sativa
CARHR248550 Cardamine hirsuta
Carub.0006s3681 Capsella rubella
Ca_07919_v3 Cicer arietinum L.
Ca_23633_v3 Cicer arietinum L.
CBR_g34865 Chara braunii
CBR_g44444 Chara braunii
Cc02_g38020 Coffea canephora
CDE04G0432 Ceratophyllum demersum
CDE04G2266 Ceratophyllum demersum
CDE06G2505 Ceratophyllum demersum
Cfa003926 Carpinus fangiana
Cfa003927 Carpinus fangiana
Cfa024272 Carpinus fangiana
Ciclev10018441m.g Citrus clementina
CiPaw.01G061200 Carya illinoinensis
CiPaw.02G030700 Carya illinoinensis
ClCG05G001530 Citrullus lanatus
COL.COLO4_12713 Corchorus olitorius
Cre12.g543850 Chlamydomonas reinhardtii
CsaV3_3G008910 Cucumis sativus L.
CSS0010662 Camellia sinensis var. sinensis
CSS0048858 Camellia sinensis var. sinensis
DCAR_008608 Daucus carota
Dinv32483 Davidia involucrata
Dinv43814 Davidia involucrata
Dinv43815 Davidia involucrata
Dinv43816 Davidia involucrata
Duzib133G1367 Durio zibethinus
Duzib268G1202 Durio zibethinus
ECA240G3092 Erigeron canadensis
EL10Ac1g00416 Beta vulgaris
Eucgr.E00136 Eucalyptus grandis
FAN01G0910 Fragaria x ananassa
FAN03G0059 Fragaria x ananassa
FAN06G0746 Fragaria x ananassa
FAN06G4334 Fragaria x ananassa
FAN10G1682 Fragaria x ananassa
FAN10G2005 Fragaria x ananassa
FvH4_7g14270 Fragaria vesca
Glyma.03G009200 Glycine max
Glyma.07G070700 Glycine max
Glyma.09G259400 Glycine max
Glyma.18G232900 Glycine max
Gohir.A11G088900 Gossypium hirsutum
Gohir.A12G108900 Gossypium hirsutum
Gohir.D11G093200 Gossypium hirsutum
Gohir.D12G111900 Gossypium hirsutum
Gorai.007G099500 Gossypium raimondii
Gorai.008G121300 Gossypium raimondii
GSVIVG01026827001 Vitis vinifera
GSVIVG01026933001 Vitis vinifera
HanXRQChr03g0093461 Helianthus annuus
HanXRQChr13g0426551 Helianthus annuus
Haze_15503 Corylus avellana
Haze_15504 Corylus avellana
HPP92_025393 Vanilla planifolia
HPP92_025394 Vanilla planifolia
HPP92_025552 Vanilla planifolia
HPP92_028274 Vanilla planifolia
HPP92_028275 Vanilla planifolia
Hund27274 Selenicereus undatus
Lalb_Chr04g0256941 Lupinus albus
Lalb_Chr10g0096951 Lupinus albus
Lalb_Chr17g0339611 Lupinus albus
Lj1g0005367 Lotus japonicus
Lj3g0003387 Lotus japonicus
Lj7C512T7 Lonicera japonica
Lsat_1_v5_gn_3_137161 Lactuca sativa
Manes.01G256801 Manihot esculenta
Manes.05G034300 Manihot esculenta
Mapoly0018s0023 Marchantia polymorpha
MapolyY_A0045 Marchantia polymorpha
MD01G1060600 Malus domestica
MD07G1137100 Malus domestica
Medtr7g077700 Medicago truncatula
Medtr8g030800 Medicago truncatula
MELO3C006111.2 Cucumis melo
Migut.N01446 Erythranthe guttata
Migut.O00143 Erythranthe guttata
MSTRG.17267 Avicennia marina
Nitab4.5_0000583g0090 Nicotiana tabacum
Nitab4.5_0000885g0020 Nicotiana tabacum
Nn1g01533 Nelumbo nucifera
Nn6g33423 Nelumbo nucifera
Oeu052946.1 Olea europaea
Oeu053747.5 Olea europaea
Os07g0648266 Oryza sativa ssp. japonica
Os07g0648300 Oryza sativa ssp. japonica
Os10g0550066 Oryza sativa ssp. japonica
Os10g0550100 Oryza sativa ssp. japonica
Peaxi162Scf00020g00327 Petunia axillaris
PGR042G0360 Punica granatum
PGSC0003DMG400000171 Solanum tuberosum
Phvul.002G081700 Phaseolus vulgaris
Phvul.008G142400 Phaseolus vulgaris
Phvul.010G099000 Phaseolus vulgaris
Potri.002G159900 Populus trichocarpa
Potri.014G084500 Populus trichocarpa
Pp3c11_14610 Physcomitrium patens
Pp3c24_11620 Physcomitrium patens
Pp3c8_17600 Physcomitrium patens
Prupe.2G170500 Prunus persica
Psat0ss3759g0200 Pisum sativum
Psat3g108400 Pisum sativum
Psat4g169200 Pisum sativum
Psat4g193320 Pisum sativum
Psat4g205160 Pisum sativum
Psat6g008040 Pisum sativum
PSO063G5861 Papaver somniferum
PSO782G4956 Papaver somniferum
QL08p048825 Quercus lobata
RcHm_v2.0_Chr1g0355261 Rosa chinensis
Rhsim07G0015100 Rhododendron simsii
Sabra02G0126900 Salix brachista
Sabra14G0061300 Salix brachista
SalBow3G0963 Salvia bowleyana
Sc23g0002910 Simmondsia chinensis
Sed0006269 Sechium edule
Sed0017726 Sechium edule
SEGI_03490 Sequoiadendron giganteum
SEGI_14791 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05665 Striga asiatica
SGA_v2.0_scaffold43G16414 Striga asiatica
SHI13445 Sapria himalayana
SHI13446 Sapria himalayana
SHI13447 Sapria himalayana
SHI13448 Sapria himalayana
SHI13450 Sapria himalayana
SMO147G0395 Selaginella moellendorffii
Solyc01g094620.3 Solanum lycopersicum
Sopen01g038430 Solanum pennellii
Sp6g00490 Schrenkiella parvula
TAR629G2967 Trochodendron aralioides
TAR636G2440 Trochodendron aralioides
THA.LOC104801439 Tarenaya hassleriana
THA.LOC104825837 Tarenaya hassleriana
THA.LOC104827725 Tarenaya hassleriana
Thecc.01G359000 Theobroma cacao
Thhalv10028357m.g Eutrema salsugineum
TPR.G15040 Trifolium pratense
TPR.G17917 Trifolium pratense
TPR.G30982 Trifolium pratense
TPR.G37789 Trifolium pratense
TPR.G701 Trifolium pratense
TPR.G8688 Trifolium pratense
TPR.G8692 Trifolium pratense
TWI59G0279 Tripterygium wilfordii
unitig_0.g1263 Utricularia gibba
unitig_61.g26386 Utricularia gibba
vmacro13290 Vaccinium macrocarpon
VMungo0331G1375 Vigna mungo
VMungo0540G1705 Vigna mungo
VMungo1127G1485 Vigna mungo
VMungo1215G0982 Vigna mungo
VMungo1383G3436 Vigna mungo
Zm00001eb000520 Zea mays
Zm00001eb055510 Zea mays
Zm00001eb156420 Zea mays
Zm00001eb245130 Zea mays
Zm00001eb291570 Zea mays
Zm00001eb373730 Zea mays
Zm00001eb382450 Zea mays
Zm00001eb404370 Zea mays

User provided reference genes

Program Settings