Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23060 Brassica napus
A07p26930 Brassica napus
A07p44770 Brassica napus
Aa31LG4G1230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3720 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3722 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3724 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3743 Anthoceros agrestis
Actinidia18254 Actinidia chinensis
Actinidia25473 Actinidia chinensis
Ah.01g016990 Amaranthus hybridus
AL2G40460 Arabidopsis lyrata
Aqoxy7G03379 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52HH2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9XRG1B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A1Q64B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BDT6Z1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8IK15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HTFE1H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NIPD93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZ8KW2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VHV24A Arachis hypogaea
AT1G80920 Arabidopsis thaliana
ATR0580G394 Amborella trichopoda
Atru.chr1.2783 Acer truncatum
AUR62025872 Chenopodium quinoa
AUR62029843 Chenopodium quinoa
BcaB02g07239 Brassica carinata
BcaB02g08712 Brassica carinata
BcaB05g25215 Brassica carinata
BcaC03g15919 Brassica carinata
BcaC08g45347 Brassica carinata
BcaC08g47535 Brassica carinata
BolC2t09685H Brassica oleracea
BolC6t38126H Brassica oleracea
BolC6t40375H Brassica oleracea
BraA02t07304Z Brassica rapa
BraA07t30338Z Brassica rapa
BraA07t31985Z Brassica rapa
C02p36810 Brassica napus
C06p29610 Brassica napus
C06p53590 Brassica napus
CAN.G1932.6 Capsicum annuum
CAN.G407.1 Capsicum annuum
CANSAT56G4248 Cannabis sativa
CARHR073560 Cardamine hirsuta
Carub.0002s2662 Capsella rubella
Ca_06645_v3 Cicer arietinum L.
Cc04_g05210 Coffea canephora
CDE02G3149 Ceratophyllum demersum
CDE04G0124 Ceratophyllum demersum
CDE04G1020 Ceratophyllum demersum
CDE04G1777 Ceratophyllum demersum
Cfa001871 Carpinus fangiana
Ciclev10026659m.g Citrus clementina
CiPaw.01G255600 Carya illinoinensis
CiPaw.02G162800 Carya illinoinensis
ClCG10G012870 Citrullus lanatus
COL.COLO4_26747 Corchorus olitorius
COL.COLO4_28656 Corchorus olitorius
Cpa.g.sc362.2 Carica papaya
Cre07.g327450 Chlamydomonas reinhardtii
CsaV3_3G032720 Cucumis sativus L.
CsaV3_3G032730 Cucumis sativus L.
CSS0012292 Camellia sinensis var. sinensis
CSS0014583 Camellia sinensis var. sinensis
CSS0041792 Camellia sinensis var. sinensis
CSS0042256 Camellia sinensis var. sinensis
DCAR_016307 Daucus carota
DCAR_016308 Daucus carota
DCAR_025553 Daucus carota
Dinv21418 Davidia involucrata
Dinv23277 Davidia involucrata
Duzib160G0069 Durio zibethinus
Duzib235G0945 Durio zibethinus
Duzib235G1193 Durio zibethinus
ECA232G4261 Erigeron canadensis
ECA246G2335 Erigeron canadensis
ECA247G3925 Erigeron canadensis
EL10Ac5g11419 Beta vulgaris
Eucgr.F03971 Eucalyptus grandis
Eucgr.F03977 Eucalyptus grandis
Eucgr.J03121 Eucalyptus grandis
FAN02G0674 Fragaria x ananassa
FAN05G3986 Fragaria x ananassa
FAN14G3070 Fragaria x ananassa
FvH4_6g28480 Fragaria vesca
Glyma.07G021800 Glycine max
Glyma.08G220000 Glycine max
Gohir.A05G118300 Gossypium hirsutum
Gohir.D05G119000 Gossypium hirsutum
Gorai.009G122900 Gossypium raimondii
GSVIVG01015991001 Vitis vinifera
HanXRQChr02g0034051 Helianthus annuus
HanXRQChr09g0274111 Helianthus annuus
HanXRQChr16g0499401 Helianthus annuus
Haze_16677 Corylus avellana
Hma1.2p1_0109F.1_g052660 Hydrangea macrophylla
Hma1.2p1_0329F.1_g127190 Hydrangea macrophylla
Hund02413 Selenicereus undatus
Hund02414 Selenicereus undatus
Lalb_Chr01g0012021 Lupinus albus
Lalb_Chr25g0278771 Lupinus albus
Lj3g0007846 Lotus japonicus
Lj3g0014635 Lotus japonicus
Lsat_1_v5_gn_1_30900 Lactuca sativa
Lsat_1_v5_gn_4_86780 Lactuca sativa
Lsat_1_v5_gn_4_86800 Lactuca sativa
Manes.04G101600 Manihot esculenta
Manes.11G068500 Manihot esculenta
Mapoly0004s0037 Marchantia polymorpha
Mapoly0124s0043 Marchantia polymorpha
MBI14_g09104_MAGBIO Magnolia biondii
MBI15_g18233_MAGBIO Magnolia biondii
MD09G1225800 Malus domestica
MD17G1224600 Malus domestica
Medtr4g007300 Medicago truncatula
MELO3C026732.2 Cucumis melo
Migut.D01129 Erythranthe guttata
Migut.G01167 Erythranthe guttata
Migut.I00685 Erythranthe guttata
Migut.K00581 Erythranthe guttata
MSTRG.11188 Avicennia marina
MSTRG.22803 Avicennia marina
MSTRG.9399 Avicennia marina
Nitab4.5_0000886g0060 Nicotiana tabacum
Nitab4.5_0002700g0120 Nicotiana tabacum
Nitab4.5_0008962g0050 Nicotiana tabacum
Nitab4.5_0009867g0010 Nicotiana tabacum
Oeu004558.1 Olea europaea
Oeu018279.2 Olea europaea
Os06g0650900 Oryza sativa ssp. japonica
Peaxi162Scf00207g00438 Petunia axillaris
Peaxi162Scf00553g00055 Petunia axillaris
PGR031G3767 Punica granatum
PGR037G0008 Punica granatum
PGR102G2985 Punica granatum
PGSC0003DMG400014210 Solanum tuberosum
PGSC0003DMG400028488 Solanum tuberosum
Phvul.010G162600 Phaseolus vulgaris
Potri.001G043100 Populus trichocarpa
Potri.003G183700 Populus trichocarpa
Pp3c12_16420 Physcomitrium patens
Pp3c18_3720 Physcomitrium patens
Pp3c18_3780 Physcomitrium patens
Pp3c18_3800 Physcomitrium patens
Pp3c19_10460 Physcomitrium patens
Pp3c22_22070 Physcomitrium patens
Pp3c22_22180 Physcomitrium patens
Pp3c26_5100 Physcomitrium patens
Pp3c3_35390 Physcomitrium patens
Pp3c4_11750 Physcomitrium patens
Pp3c4_26000 Physcomitrium patens
Pp3c8_2480 Physcomitrium patens
Prupe.3G100300 Prunus persica
Psat7g263240 Pisum sativum
PSO017G5603 Papaver somniferum
PSO063G6005 Papaver somniferum
QL05p036319 Quercus lobata
RcHm_v2.0_Chr2g0132701 Rosa chinensis
Rhsim04G0048800 Rhododendron simsii
Rhsim09G0128500 Rhododendron simsii
Rhsim10G0005600 Rhododendron simsii
Rhsim12G0184600 Rhododendron simsii
Rhsim12G0186500 Rhododendron simsii
RhsimUnG0161600 Rhododendron simsii
Sabra01G0029600 Salix brachista
Sabra03G0134200 Salix brachista
SalBow6G5477 Salvia bowleyana
SalBow7G4540 Salvia bowleyana
Sc13g0009300 Simmondsia chinensis
Sed0018915 Sechium edule
Sed0021285 Sechium edule
SEGI_19709 Sequoiadendron giganteum
SEGI_25751 Sequoiadendron giganteum
SMO119G0081 Selaginella moellendorffii
SMO119G0204 Selaginella moellendorffii
Solyc03g117590.3 Solanum lycopersicum
Solyc06g068500.3 Solanum lycopersicum
Sopen03g036500 Solanum pennellii
Sopen06g025750 Solanum pennellii
Sp5g34820 Schrenkiella parvula
TAR383G0585 Trochodendron aralioides
TAR625G0694 Trochodendron aralioides
TAR636G1057 Trochodendron aralioides
THA.LOC104812418 Tarenaya hassleriana
Thecc.06G043800 Theobroma cacao
Thhalv10019250m.g Eutrema salsugineum
TPR.G3351 Trifolium pratense
TWI12G1059 Tripterygium wilfordii
TWI18G0048 Tripterygium wilfordii
unitig_0.g1100 Utricularia gibba
unitig_61.g26225 Utricularia gibba
vmacro16846 Vaccinium macrocarpon
vmacro16847 Vaccinium macrocarpon
VMungo0331G1722 Vigna mungo
Zm00001eb388670 Zea mays

User provided reference genes

Program Settings