Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p45960 Brassica napus
A09p11090 Brassica napus
Aa31LG5G21390 Aethionema arabicum
Aa31LG8G13940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.959 Anthoceros agrestis
Actinidia31104 Actinidia chinensis
Actinidia34723 Actinidia chinensis
AL3G49380 Arabidopsis lyrata
Aqoxy1G03742 Aquilegia oxysepala
Aqoxy2G01205 Aquilegia oxysepala
Aqoxy3G02826 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C03M9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KEI5RC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2449T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VF2KJZ Arachis hypogaea
AT2G16710 Arabidopsis thaliana
AT2G36260 Arabidopsis thaliana
ATR0789G023 Amborella trichopoda
ATR0789G158 Amborella trichopoda
Atru.chr12.1024 Acer truncatum
Atru.chr8.1550 Acer truncatum
AUR62013762 Chenopodium quinoa
AUR62023392 Chenopodium quinoa
BcaB07g31755 Brassica carinata
BcaB08g34660 Brassica carinata
BcaC01g02994 Brassica carinata
BcaC04g23009 Brassica carinata
BolC3t18012H Brassica oleracea
BolC3t18015H Brassica oleracea
BraA03t13724Z Brassica rapa
BraA09t36751Z Brassica rapa
C03p57360 Brassica napus
C03p57390 Brassica napus
C09p13080 Brassica napus
CAN.G397.10 Capsicum annuum
CANSAT56G1853 Cannabis sativa
CANSAT56G3878 Cannabis sativa
CARHR106940 Cardamine hirsuta
Carub.0001s3604 Capsella rubella
Carub.0003s3046 Capsella rubella
Ca_08885_v3 Cicer arietinum L.
CBR_g4764 Chara braunii
Cc00_g28380 Coffea canephora
Cc02_g09640 Coffea canephora
Cc05_g02390 Coffea canephora
CDE02G3384 Ceratophyllum demersum
CDE11G1238 Ceratophyllum demersum
Cfa016601 Carpinus fangiana
Cfa025191 Carpinus fangiana
Ciclev10013682m.g Citrus clementina
Ciclev10017146m.g Citrus clementina
CiPaw.09G013300 Carya illinoinensis
CiPaw.13G039000 Carya illinoinensis
ClCG05G018420 Citrullus lanatus
ClCG05G021780 Citrullus lanatus
COL.COLO4_29759 Corchorus olitorius
Cpa.g.sc5.27 Carica papaya
Cpa.g.sc56.14 Carica papaya
Cre09.g400775 Chlamydomonas reinhardtii
CsaV3_5G035380 Cucumis sativus L.
CSS0000169 Camellia sinensis var. sinensis
CSS0039541 Camellia sinensis var. sinensis
DCAR_009160 Daucus carota
DCAR_020755 Daucus carota
Dinv09618 Davidia involucrata
Dinv21215 Davidia involucrata
Duzib128G1248 Durio zibethinus
ECA233G4183 Erigeron canadensis
EL10Ac1g00743 Beta vulgaris
Eucgr.J00259 Eucalyptus grandis
FAN02G4247 Fragaria x ananassa
FAN05G2371 Fragaria x ananassa
FAN05G5536 Fragaria x ananassa
FAN09G3852 Fragaria x ananassa
FAN14G1410 Fragaria x ananassa
FAN24G1424 Fragaria x ananassa
FvH4_2g10490 Fragaria vesca
FvH4_6g18590 Fragaria vesca
Glyma.03G195000 Glycine max
Glyma.19G194700 Glycine max
Gohir.A04G063300 Gossypium hirsutum
Gohir.A09G013133 Gossypium hirsutum
Gohir.A09G139066 Gossypium hirsutum
Gohir.D04G100300 Gossypium hirsutum
Gohir.D09G011800 Gossypium hirsutum
Gohir.D09G135500 Gossypium hirsutum
Gorai.006G013800 Gossypium raimondii
Gorai.006G155500 Gossypium raimondii
Gorai.009G403300 Gossypium raimondii
GSVIVG01033834001 Vitis vinifera
HanXRQChr08g0217241 Helianthus annuus
HanXRQChr12g0368091 Helianthus annuus
Haze_19603 Corylus avellana
Haze_26136 Corylus avellana
Haze_26850 Corylus avellana
Haze_27704 Corylus avellana
Hma1.2p1_0232F.1_g097840 Hydrangea macrophylla
Hund06781 Selenicereus undatus
Hund06783 Selenicereus undatus
Hund22272 Selenicereus undatus
Hund30410 Selenicereus undatus
Hund30565 Selenicereus undatus
Lalb_Chr20g0111761 Lupinus albus
Lalb_Chr25g0288351 Lupinus albus
Lj1g0011692 Lotus japonicus
Lsat_1_v5_gn_8_24141 Lactuca sativa
Manes.09G055901 Manihot esculenta
Mapoly0089s0049 Marchantia polymorpha
MCO14G517 Micromonas commoda
MD12G1035500 Malus domestica
MD14G1022300 Malus domestica
Medtr1g060070 Medicago truncatula
MELO3C012350.2 Cucumis melo
Migut.F00877 Erythranthe guttata
Migut.F01607 Erythranthe guttata
MSTRG.27572 Avicennia marina
Nitab4.5_0001437g0010 Nicotiana tabacum
Nitab4.5_0001725g0170 Nicotiana tabacum
Nitab4.5_0005483g0040 Nicotiana tabacum
Nitab4.5_0011538g0030 Nicotiana tabacum
Nn1g02816 Nelumbo nucifera
Nn2g14150 Nelumbo nucifera
Nn4g24282 Nelumbo nucifera
Nn4g25160 Nelumbo nucifera
Nn5g30493 Nelumbo nucifera
Nn6g34911 Nelumbo nucifera
Nn7g36891 Nelumbo nucifera
Oeu024811.2 Olea europaea
Oeu026593.1 Olea europaea
Oeu054399.2 Olea europaea
Os01g0105800 Oryza sativa ssp. japonica
Os12g0485500 Oryza sativa ssp. japonica
Peaxi162Scf00290g00816 Petunia axillaris
PGR031G3484 Punica granatum
PGR044G1450 Punica granatum
PGR142G0161 Punica granatum
PGSC0003DMG400023972 Solanum tuberosum
PGSC0003DMG400023988 Solanum tuberosum
PGSC0003DMG401002701 Solanum tuberosum
PGSC0003DMG402002701 Solanum tuberosum
Phvul.001G189600 Phaseolus vulgaris
Potri.008G020400 Populus trichocarpa
Potri.010G238800 Populus trichocarpa
Pp3c18_19580 Physcomitrium patens
PRCOL_00003093 Prasinoderma coloniale
Prupe.7G111000 Prunus persica
Psat4g110960 Pisum sativum
Psat6g013760 Pisum sativum
PSO151G0153 Papaver somniferum
PSO170G1366 Papaver somniferum
PSO339G3466 Papaver somniferum
PSO407G0116 Papaver somniferum
QL04p044862 Quercus lobata
QL04p047329 Quercus lobata
QL07p038879 Quercus lobata
QL07p039199 Quercus lobata
RcHm_v2.0_Chr3g0473171 Rosa chinensis
RcHm_v2.0_Chr6g0245041 Rosa chinensis
RcHm_v2.0_Chr6g0270521 Rosa chinensis
RcHm_v2.0_Chr7g0219151 Rosa chinensis
Rhsim03G0097900 Rhododendron simsii
Rhsim09G0141900 Rhododendron simsii
Sabra08G0013700 Salix brachista
Sabra10G0187000 Salix brachista
SalBow6G0063 Salvia bowleyana
SalBow6G0069 Salvia bowleyana
Sc09g0005350 Simmondsia chinensis
Sc12g0005000 Simmondsia chinensis
Sc20g0001150 Simmondsia chinensis
Sed0026028 Sechium edule
SEGI_09582 Sequoiadendron giganteum
SGA_v2.0_scaffold184G40028 Striga asiatica
SGA_v2.0_scaffold62G21335 Striga asiatica
SGA_v2.0_scaffold85G26612 Striga asiatica
SMO147G0221 Selaginella moellendorffii
SMO330G0045 Selaginella moellendorffii
Solyc09g009440.3 Solanum lycopersicum
Solyc09g009460.4 Solanum lycopersicum
Solyc11g006920.2 Solanum lycopersicum
Sopen09g004180 Solanum pennellii
Sopen11g002830 Solanum pennellii
Sp3g30040 Schrenkiella parvula
TAR633G0109 Trochodendron aralioides
TAR636G2922 Trochodendron aralioides
THA.LOC104804331 Tarenaya hassleriana
Thecc.05G088300 Theobroma cacao
Thecc.09G106900 Theobroma cacao
Thhalv10022903m.g Eutrema salsugineum
TPR.G4681 Trifolium pratense
TPR.G9901 Trifolium pratense
TWI53G1385 Tripterygium wilfordii
TWI74G0284 Tripterygium wilfordii
unitig_0.g1020 Utricularia gibba
vmacro10309 Vaccinium macrocarpon
VMungo1383G3423 Vigna mungo
Zm00001eb126830 Zea mays
Zm00001eb334200 Zea mays

User provided reference genes

Program Settings