Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17310 Brassica napus
A03p56450 Brassica napus
A03p59300 Brassica napus
A07p01420 Brassica napus
A07p16340 Brassica napus
Aa31LG2G20670 Aethionema arabicum
Aa31LG3G390 Aethionema arabicum
Aa31LG8G16370 Aethionema arabicum
Actinidia29964 Actinidia chinensis
Actinidia29965 Actinidia chinensis
Actinidia29966 Actinidia chinensis
Actinidia38507 Actinidia chinensis
Ah.09g228510 Amaranthus hybridus
AL3G48980 Arabidopsis lyrata
AL7G22370 Arabidopsis lyrata
AL7G26940 Arabidopsis lyrata
Aqoxy7G02898 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea
AT2G19330 Arabidopsis thaliana
AT4G26050 Arabidopsis thaliana
AT4G29880 Arabidopsis thaliana
ATR0580G242 Amborella trichopoda
Atru.chr7.914 Acer truncatum
AUR62027430 Chenopodium quinoa
AUR62031265 Chenopodium quinoa
BcaB03g16722 Brassica carinata
BcaB08g34854 Brassica carinata
BcaC06g32772 Brassica carinata
BcaC06g36564 Brassica carinata
BcaC08g43401 Brassica carinata
BcaNung00498 Brassica carinata
BolC1t02107H Brassica oleracea
BolC6t35852H Brassica oleracea
BolC7t40684H Brassica oleracea
BolC7t45955H Brassica oleracea
BolC7t46200H Brassica oleracea
BraA01t01686Z Brassica rapa
BraA03t14715Z Brassica rapa
BraA03t14987Z Brassica rapa
BraA07t27936Z Brassica rapa
BraA07t29361Z Brassica rapa
C01p21810 Brassica napus
C06p07660 Brassica napus
C06p07690 Brassica napus
C07p02870 Brassica napus
C07p54660 Brassica napus
C07p57310 Brassica napus
CANSAT11G2669 Cannabis sativa
CARHR109780 Cardamine hirsuta
CARHR233550 Cardamine hirsuta
CARHR237770 Cardamine hirsuta
Carub.0003s3355 Capsella rubella
Carub.0004s1475 Capsella rubella
Carub.0007s1491 Capsella rubella
Ca_02128_v3 Cicer arietinum L.
Ca_21264_v3 Cicer arietinum L.
Cc06_g17230 Coffea canephora
CDE02G3632 Ceratophyllum demersum
CDE05G1169 Ceratophyllum demersum
CDE05G3189 Ceratophyllum demersum
Ciclev10008785m.g Citrus clementina
CiPaw.07G199200 Carya illinoinensis
CiPaw.08G031400 Carya illinoinensis
ClCG06G013820 Citrullus lanatus
ClCG06G013840 Citrullus lanatus
ClCG11G011550 Citrullus lanatus
COL.COLO4_37566 Corchorus olitorius
Cpa.g.sc115.61 Carica papaya
CsaV3_1G032040 Cucumis sativus L.
CsaV3_2G008970 Cucumis sativus L.
CSS0013411 Camellia sinensis var. sinensis
CSS0032765 Camellia sinensis var. sinensis
DCAR_009479 Daucus carota
DCAR_018009 Daucus carota
DCAR_020142 Daucus carota
Dinv25469 Davidia involucrata
Duzib150G0655 Durio zibethinus
Duzib168G0040 Durio zibethinus
Duzib170G0719 Durio zibethinus
ECA236G3452 Erigeron canadensis
ECA240G3569 Erigeron canadensis
EL10Ac8g19292 Beta vulgaris
Eucgr.C00084 Eucalyptus grandis
Eucgr.C00085 Eucalyptus grandis
Eucgr.C02218 Eucalyptus grandis
FAN07G0750 Fragaria x ananassa
FAN12G0296 Fragaria x ananassa
FAN17G0675 Fragaria x ananassa
FAN17G2237 Fragaria x ananassa
FAN22G1784 Fragaria x ananassa
FvH4_4g06910 Fragaria vesca
Glyma.09G061500 Glycine max
Glyma.15G167800 Glycine max
Glyma.17G057600 Glycine max
Gohir.A05G408700 Gossypium hirsutum
Gohir.A13G182300 Gossypium hirsutum
Gohir.D04G006700 Gossypium hirsutum
Gohir.D13G185000 Gossypium hirsutum
Gorai.012G008100 Gossypium raimondii
Gorai.013G211100 Gossypium raimondii
GSVIVG01029273001 Vitis vinifera
HanXRQChr04g0103791 Helianthus annuus
HanXRQChr05g0142141 Helianthus annuus
HanXRQChr09g0245371 Helianthus annuus
Haze_22047 Corylus avellana
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla
HPP92_010787 Vanilla planifolia
Hund24523 Selenicereus undatus
Lalb_Chr07g0180741 Lupinus albus
Lalb_Chr13g0299841 Lupinus albus
Lalb_Chr23g0276711 Lupinus albus
Lj4g0007200 Lotus japonicus
Lj6g0025589 Lotus japonicus
Lju432C7T0 Lonicera japonica
Lju50A41T23 Lonicera japonica
Lju50A42T20 Lonicera japonica
Lsat_1_v5_gn_7_55120 Lactuca sativa
Lsat_1_v5_gn_8_68380 Lactuca sativa
Manes.06G017500 Manihot esculenta
Manes.14G161200 Manihot esculenta
MBI14_g10728_MAGBIO Magnolia biondii
MBI16_g09350_MAGBIO Magnolia biondii
MD13G1241200 Malus domestica
MD16G1245200 Malus domestica
Medtr2g038380 Medicago truncatula
Medtr4g127120 Medicago truncatula
MELO3C003949.2 Cucumis melo
MELO3C029529.2 Cucumis melo
Migut.J00777 Erythranthe guttata
MSTRG.19360 Avicennia marina
Nitab4.5_0001335g0020 Nicotiana tabacum
Nn8g40645 Nelumbo nucifera
Oeu012385.1 Olea europaea
Oeu035455.1 Olea europaea
Oeu043899.1 Olea europaea
Oeu044656.1 Olea europaea
Os04g0605300 Oryza sativa ssp. japonica
Peaxi162Scf00006g02914 Petunia axillaris
PGR018G0002 Punica granatum
PGR044G1644 Punica granatum
PGR142G3132 Punica granatum
PGR142G4131 Punica granatum
PGSC0003DMG400006458 Solanum tuberosum
Phvul.003G139800 Phaseolus vulgaris
Phvul.009G234500 Phaseolus vulgaris
Potri.006G072700 Populus trichocarpa
Potri.018G139700 Populus trichocarpa
Prupe.1G072100 Prunus persica
Psat1g142440 Pisum sativum
Psat1g142960 Pisum sativum
Psat4g014280 Pisum sativum
PSO063G4618 Papaver somniferum
PSO063G7373 Papaver somniferum
PSO170G1153 Papaver somniferum
QL02p064658 Quercus lobata
RcHm_v2.0_Chr4g0398811 Rosa chinensis
Rhsim02G0202600 Rhododendron simsii
Rhsim03G0267900 Rhododendron simsii
Rhsim11G0051100 Rhododendron simsii
Sabra06G0054100 Salix brachista
Sabra18G0114200 Salix brachista
SalBow3G1932 Salvia bowleyana
Sc08g0004730 Simmondsia chinensis
Sc14g0003130 Simmondsia chinensis
Sed0001635 Sechium edule
Sed0020380 Sechium edule
Sed0024940 Sechium edule
SEGI_15755 Sequoiadendron giganteum
SEGI_36064 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12781 Striga asiatica
SHI03070 Sapria himalayana
SHI33663 Sapria himalayana
Solyc12g017480.3 Solanum lycopersicum
Sopen12g008270 Solanum pennellii
Sp3g32700 Schrenkiella parvula
Sp7g27690 Schrenkiella parvula
SpUn0235_0010 Schrenkiella parvula
TAR625G0633 Trochodendron aralioides
THA.LOC104814639 Tarenaya hassleriana
THA.LOC104817769 Tarenaya hassleriana
Thecc.09G192200 Theobroma cacao
Thhalv10022960m.g Eutrema salsugineum
Thhalv10025419m.g Eutrema salsugineum
Thhalv10027502m.g Eutrema salsugineum
TPR.G2523 Trifolium pratense
TPR.G5414 Trifolium pratense
TWI32G0581 Tripterygium wilfordii
TWI34G1803 Tripterygium wilfordii
unitig_578.g15728 Utricularia gibba
vmacro00173 Vaccinium macrocarpon
vmacro22287 Vaccinium macrocarpon
VMungo1215G2556 Vigna mungo
VMungo1309G0641 Vigna mungo
VMungo1309G3166 Vigna mungo
Zm00001eb071570 Zea mays

User provided reference genes

Program Settings