Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p24130 Brassica napus
A04p24530 Brassica napus
A04p24550 Brassica napus
A05p13710 Brassica napus
Aa31LG5G5180 Aethionema arabicum
Aa31sc989G10 Aethionema arabicum
Actinidia18391 Actinidia chinensis
Ah.06g182940 Amaranthus hybridus
Ah.07g203300 Amaranthus hybridus
AL4G26960 Arabidopsis lyrata
AL4G27130 Arabidopsis lyrata
AL4G27150 Arabidopsis lyrata
AL4G27160 Arabidopsis lyrata
Aqoxy4G00018 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4WT42H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2PEHJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MLK5V4 Arachis hypogaea
AT2G31865 Arabidopsis thaliana
AT2G31870 Arabidopsis thaliana
ATR0743G113 Amborella trichopoda
Atru.chr8.1212 Acer truncatum
Atru.chr8.1215 Acer truncatum
Atru.chr8.1216 Acer truncatum
AUR62002371 Chenopodium quinoa
AUR62002491 Chenopodium quinoa
AUR62023694 Chenopodium quinoa
AUR62023697 Chenopodium quinoa
AUR62023816 Chenopodium quinoa
BcaB02g10421 Brassica carinata
BcaB06g28446 Brassica carinata
BcaB06g28530 Brassica carinata
BcaB06g28570 Brassica carinata
BcaB06g28571 Brassica carinata
BcaC02g07961 Brassica carinata
BcaC02g07962 Brassica carinata
BcaC02g11292 Brassica carinata
BolC4t23342H Brassica oleracea
BolC4t27577H Brassica oleracea
BolC4t27627H Brassica oleracea
BolC4t27628H Brassica oleracea
BraA04t17933Z Brassica rapa
BraA04t17975Z Brassica rapa
BraA04t17976Z Brassica rapa
BraA05t20307Z Brassica rapa
C04p17950 Brassica napus
C04p60860 Brassica napus
C04p61430 Brassica napus
C04p61440 Brassica napus
CAN.G1011.3 Capsicum annuum
CAN.G566.43 Capsicum annuum
CANSAT54G1991 Cannabis sativa
CARHR125360 Cardamine hirsuta
CARHR125370 Cardamine hirsuta
CARHR125390 Cardamine hirsuta
CARHR125540 Cardamine hirsuta
CARHR125550 Cardamine hirsuta
CARHR125560 Cardamine hirsuta
CARHR127710 Cardamine hirsuta
Carub.0004s1301 Capsella rubella
Carub.0004s1315 Capsella rubella
Carub.0004s1316 Capsella rubella
Carub.0004s1317 Capsella rubella
Ca_14388_v3 Cicer arietinum L.
Ca_14389_v3 Cicer arietinum L.
Ca_14410_v3 Cicer arietinum L.
Ca_14797_v3 Cicer arietinum L.
Cc03_g16130 Coffea canephora
Cc03_g16150 Coffea canephora
CDE02G4666 Ceratophyllum demersum
Cfa008526 Carpinus fangiana
Cfa022277 Carpinus fangiana
Ciclev10019560m.g Citrus clementina
CiPaw.01G202400 Carya illinoinensis
ClCG06G009800 Citrullus lanatus
ClCG06G009820 Citrullus lanatus
ClCG06G009850 Citrullus lanatus
COL.COLO4_20652 Corchorus olitorius
Cpa.g.sc9.246 Carica papaya
CsaV3_2G011270 Cucumis sativus L.
CSS0008419 Camellia sinensis var. sinensis
CSS0013125 Camellia sinensis var. sinensis
CSS0049757 Camellia sinensis var. sinensis
DCAR_011557 Daucus carota
Dinv24747 Davidia involucrata
Duzib128G1428 Durio zibethinus
ECA248G0698 Erigeron canadensis
EL10Ac1g02221 Beta vulgaris
EL10Ac3g06174 Beta vulgaris
EL10Ac3g06177 Beta vulgaris
EL10Ac4g08585 Beta vulgaris
EL10Ac4g08586 Beta vulgaris
Eucgr.A00416 Eucalyptus grandis
FAN05G5719 Fragaria x ananassa
FAN09G1160 Fragaria x ananassa
FAN14G1536 Fragaria x ananassa
FAN23G2573 Fragaria x ananassa
FAN26G2706 Fragaria x ananassa
FAN28G2575 Fragaria x ananassa
FvH4_1g00120 Fragaria vesca
FvH4_6g52520 Fragaria vesca
Glyma.11G010700 Glycine max
Glyma.15G017200 Glycine max
Gohir.A01G231600 Gossypium hirsutum
Gohir.D01G221700 Gossypium hirsutum
Gohir.D04G099801 Gossypium hirsutum
Gorai.002G268300 Gossypium raimondii
Gorai.009G402700 Gossypium raimondii
GSVIVG01038259001 Vitis vinifera
HanXRQChr11g0343511 Helianthus annuus
Haze_11115 Corylus avellana
HPP92_007025 Vanilla planifolia
HPP92_007075 Vanilla planifolia
Hund22678 Selenicereus undatus
Hund22681 Selenicereus undatus
Lalb_Chr09g0320201 Lupinus albus
Lj6C291G1 Lonicera japonica
Lj6g0003881 Lotus japonicus
LjContig00222g0025650 Lotus japonicus
Lsat_1_v5_gn_1_77061 Lactuca sativa
Manes.05G207700 Manihot esculenta
Mapoly0009s0113 Marchantia polymorpha
MBI07_g42065_MAGBIO Magnolia biondii
MD02G1000300 Malus domestica
MD15G1142600 Malus domestica
Medtr3g029520 Medicago truncatula
MELO3C031172.2 Cucumis melo
Migut.G00914 Erythranthe guttata
Nitab4.5_0000160g0010 Nicotiana tabacum
Nitab4.5_0001110g0060 Nicotiana tabacum
Nitab4.5_0001110g0070 Nicotiana tabacum
Nitab4.5_0003108g0040 Nicotiana tabacum
Nitab4.5_0007046g0010 Nicotiana tabacum
Nn1g09408 Nelumbo nucifera
Oeu022914.1 Olea europaea
Oeu050305.2 Olea europaea
Os03g0843900 Oryza sativa ssp. japonica
Peaxi162Scf00057g02231 Petunia axillaris
Peaxi162Scf00459g00128 Petunia axillaris
Peaxi162Scf00459g00129 Petunia axillaris
PGR031G2246 Punica granatum
PGR042G0752 Punica granatum
PGSC0003DMG400029361 Solanum tuberosum
Phvul.002G039900 Phaseolus vulgaris
Phvul.002G040000 Phaseolus vulgaris
Phvul.007G074100 Phaseolus vulgaris
Phvul.007G277700 Phaseolus vulgaris
Potri.007G145800 Populus trichocarpa
Potri.017G002000 Populus trichocarpa
Pp3c3_12290 Physcomitrium patens
Pp3c4_17510 Physcomitrium patens
Prupe.7G270600 Prunus persica
PSO302G0027 Papaver somniferum
PSO675G3012 Papaver somniferum
PSO675G3785 Papaver somniferum
QL10p064632 Quercus lobata
QL10p065753 Quercus lobata
RcHm_v2.0_Chr2g0084431 Rosa chinensis
Rhsim02G0176000 Rhododendron simsii
Rhsim09G0002600 Rhododendron simsii
Rhsim09G0002700 Rhododendron simsii
Sabra07G0115300 Salix brachista
Sabra17G0006000 Salix brachista
SalBow3G3320 Salvia bowleyana
Sc25g0002200 Simmondsia chinensis
Sed0014321 Sechium edule
SEGI_19112 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06234 Striga asiatica
SGA_v2.0_scaffold215G42309 Striga asiatica
SGA_v2.0_scaffold319G48551 Striga asiatica
SGA_v2.0_scaffold37G14903 Striga asiatica
SHI01241 Sapria himalayana
SMO351G0652 Selaginella moellendorffii
SMO364G0163 Selaginella moellendorffii
Solyc12g017920.3 Solanum lycopersicum
Solyc12g096600.2 Solanum lycopersicum
Solyc12g096610.2 Solanum lycopersicum
Sopen12g008760 Solanum pennellii
Sopen12g032430 Solanum pennellii
Sp2g03830 Schrenkiella parvula
Sp2g03840 Schrenkiella parvula
Sp4g14220 Schrenkiella parvula
TAR362G0102 Trochodendron aralioides
TAR362G0584 Trochodendron aralioides
THA.LOC104800934 Tarenaya hassleriana
THA.LOC104800936 Tarenaya hassleriana
THA.LOC104800937 Tarenaya hassleriana
THA.LOC104800938 Tarenaya hassleriana
Thecc.05G001100 Theobroma cacao
Thhalv10016528m.g Eutrema salsugineum
Thhalv10016696m.g Eutrema salsugineum
Thhalv10017878m.g Eutrema salsugineum
TPR.G12250 Trifolium pratense
TWI63G1020 Tripterygium wilfordii
unitig_92.g28209 Utricularia gibba
unitig_92.g28210 Utricularia gibba
vmacro17029 Vaccinium macrocarpon
VMungo1215G1665 Vigna mungo
Zm00001eb064190 Zea mays

User provided reference genes

Program Settings