Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33350 Brassica napus
A09p24360 Brassica napus
Aa31LG2G7210 Aethionema arabicum
Actinidia12305 Actinidia chinensis
Ah.03g134640 Amaranthus hybridus
AL5G13040 Arabidopsis lyrata
Aqoxy3G03502 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57BZA4 Arachis hypogaea
AT2G03330 Arabidopsis thaliana
AT3G11810 Arabidopsis thaliana
ATR0730G136 Amborella trichopoda
Atru.chr11.1709 Acer truncatum
Atru.chr11.1710 Acer truncatum
AUR62005855 Chenopodium quinoa
AUR62032847 Chenopodium quinoa
BcaB03g16524 Brassica carinata
BcaB07g30304 Brassica carinata
BcaB07g30674 Brassica carinata
BcaC03g17206 Brassica carinata
BcaC03g17208 Brassica carinata
BcaC03g17209 Brassica carinata
BcaC04g21492 Brassica carinata
BolC2t11225H Brassica oleracea
BolC2t11227H Brassica oleracea
BolC9t55975H Brassica oleracea
BraA02t08358Z Brassica rapa
BraA09t38029Z Brassica rapa
C02p51330 Brassica napus
C02p51340 Brassica napus
C02p51360 Brassica napus
C02p51370 Brassica napus
C09p31190 Brassica napus
CANSAT64G0892 Cannabis sativa
CANSAT64G1203 Cannabis sativa
CANSAT64G2624 Cannabis sativa
CARHR145690 Cardamine hirsuta
Carub.0005s0231 Capsella rubella
Ca_25943_v3 Cicer arietinum L.
Ca_25944_v3 Cicer arietinum L.
Cc11_g07300 Coffea canephora
Cc11_g12520 Coffea canephora
Cfa008923 Carpinus fangiana
Ciclev10033637m.g Citrus clementina
CiPaw.05G129300 Carya illinoinensis
COL.COLO4_27958 Corchorus olitorius
COL.COLO4_27959 Corchorus olitorius
COL.COLO4_27962 Corchorus olitorius
COL.COLO4_27963 Corchorus olitorius
Cpa.g.sc1.73 Carica papaya
CSS0006655 Camellia sinensis var. sinensis
CSS0034838 Camellia sinensis var. sinensis
CSS0040782 Camellia sinensis var. sinensis
DCAR_023813 Daucus carota
Dinv34100 Davidia involucrata
Duzib248G1355 Durio zibethinus
Duzib251G0906 Durio zibethinus
ECA233G3599 Erigeron canadensis
ECA246G1613 Erigeron canadensis
EL10Ac6g13273 Beta vulgaris
Eucgr.G02471 Eucalyptus grandis
Eucgr.G02473 Eucalyptus grandis
FAN07G2405 Fragaria x ananassa
FAN12G3596 Fragaria x ananassa
FAN17G1640 Fragaria x ananassa
FAN22G1572 Fragaria x ananassa
FvH4_4g30670 Fragaria vesca
Glyma.07G227750 Glycine max
Glyma.20G030300 Glycine max
Glyma.20G030600 Glycine max
Glyma.20G030700 Glycine max
Gohir.A03G102650 Gossypium hirsutum
Gohir.A13G078300 Gossypium hirsutum
Gohir.A13G078400 Gossypium hirsutum
Gohir.D02G127600 Gossypium hirsutum
Gohir.D13G078400 Gossypium hirsutum
Gohir.D13G078600 Gossypium hirsutum
Gorai.005G143200 Gossypium raimondii
Gorai.013G089600 Gossypium raimondii
Gorai.013G089800 Gossypium raimondii
Gorai.013G089900 Gossypium raimondii
HanXRQChr12g0361771 Helianthus annuus
HanXRQChr12g0361791 Helianthus annuus
HanXRQChr12g0361861 Helianthus annuus
HanXRQChr12g0362021 Helianthus annuus
HanXRQChr12g0379221 Helianthus annuus
Haze_01654 Corylus avellana
Haze_11952 Corylus avellana
Hma1.2p1_0261F.1_g104800 Hydrangea macrophylla
Hma1.2p1_0354F.1_g133775 Hydrangea macrophylla
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla
Hund25204 Selenicereus undatus
Lalb_Chr05g0220171 Lupinus albus
Lalb_Chr05g0220181 Lupinus albus
Lalb_Chr09g0329141 Lupinus albus
Lj4g0008688 Lotus japonicus
Lj6P783T35 Lonicera japonica
Lsat_1_v5_gn_3_51801 Lactuca sativa
Lsat_1_v5_gn_4_10361 Lactuca sativa
Lsat_1_v5_gn_8_49200 Lactuca sativa
Lsat_1_v5_gn_8_49220 Lactuca sativa
Lsat_1_v5_gn_8_49240 Lactuca sativa
Lsat_1_v5_gn_8_49260 Lactuca sativa
Lsat_1_v5_gn_8_49320 Lactuca sativa
Manes.01G031900 Manihot esculenta
Manes.05G106600 Manihot esculenta
MD12G1099700 Malus domestica
MD16G1066700 Malus domestica
Medtr4g082355 Medicago truncatula
Medtr4g082360 Medicago truncatula
Medtr4g082365 Medicago truncatula
Medtr4g082550 Medicago truncatula
Migut.E00067 Erythranthe guttata
Migut.L01237 Erythranthe guttata
Migut.L01238 Erythranthe guttata
Migut.L01239 Erythranthe guttata
Migut.L01240 Erythranthe guttata
MSTRG.2328 Avicennia marina
MSTRG.734 Avicennia marina
Nitab4.5_0000014g0220 Nicotiana tabacum
Nitab4.5_0000391g0100 Nicotiana tabacum
Nitab4.5_0000391g0110 Nicotiana tabacum
Nitab4.5_0000391g0120 Nicotiana tabacum
Nitab4.5_0000391g0130 Nicotiana tabacum
Nitab4.5_0000391g0160 Nicotiana tabacum
Nitab4.5_0004471g0010 Nicotiana tabacum
Nitab4.5_0004471g0020 Nicotiana tabacum
Nitab4.5_0004471g0060 Nicotiana tabacum
Nitab4.5_0004471g0140 Nicotiana tabacum
Nitab4.5_0005448g0040 Nicotiana tabacum
Nitab4.5_0007467g0030 Nicotiana tabacum
Nitab4.5_0008978g0020 Nicotiana tabacum
Nitab4.5_0014231g0010 Nicotiana tabacum
Oeu021088.1 Olea europaea
Oeu057654.1 Olea europaea
Os12g0257500 Oryza sativa ssp. japonica
Peaxi162Scf00187g00126 Petunia axillaris
Peaxi162Scf00222g00119 Petunia axillaris
Peaxi162Scf00222g00125 Petunia axillaris
PGR016G0005 Punica granatum
PGR119G2543 Punica granatum
PGSC0003DMG400000263 Solanum tuberosum
PGSC0003DMG400002851 Solanum tuberosum
PGSC0003DMG400028337 Solanum tuberosum
PGSC0003DMG400028404 Solanum tuberosum
PGSC0003DMG400046292 Solanum tuberosum
Phvul.002G103700 Phaseolus vulgaris
Phvul.002G168700 Phaseolus vulgaris
Potri.008G091600 Populus trichocarpa
Potri.010G163300 Populus trichocarpa
Prupe.1G277700 Prunus persica
Prupe.1G280200 Prunus persica
Prupe.3G230800 Prunus persica
Psat7g135520 Pisum sativum
Psat7g153440 Pisum sativum
Psat7g154240 Pisum sativum
QL03p069872 Quercus lobata
RcHm_v2.0_Chr4g0439081 Rosa chinensis
RcHm_v2.0_Chr4g0439091 Rosa chinensis
RcHm_v2.0_Chr5g0060931 Rosa chinensis
Sabra08G0068600 Salix brachista
SalBow1G1885 Salvia bowleyana
SalBow2G2515 Salvia bowleyana
SalBow2G2694 Salvia bowleyana
SalBow2G2818 Salvia bowleyana
SalBow5G1076 Salvia bowleyana
SalBow5G4342 Salvia bowleyana
SalBow8G2290 Salvia bowleyana
SalBow8G5474 Salvia bowleyana
SEGI_06194 Sequoiadendron giganteum
SGA_v2.0_scaffold287G47147 Striga asiatica
SGA_v2.0_scaffold36G14418 Striga asiatica
Solyc04g005530.3 Solanum lycopersicum
Solyc05g012810.3 Solanum lycopersicum
Solyc05g012820.2 Solanum lycopersicum
Solyc05g012850.3 Solanum lycopersicum
Solyc05g012860.2 Solanum lycopersicum
Sopen04g001550 Solanum pennellii
Sopen05g007650 Solanum pennellii
Sopen05g007660 Solanum pennellii
Sopen05g007670 Solanum pennellii
Sopen05g007690 Solanum pennellii
Sp2g14260 Schrenkiella parvula
TAR371G0373 Trochodendron aralioides
TAR371G1243 Trochodendron aralioides
TAR629G0321 Trochodendron aralioides
THA.LOC104801852 Tarenaya hassleriana
THA.LOC104824071 Tarenaya hassleriana
Thecc.02G338900 Theobroma cacao
Thhalv10005445m.g Eutrema salsugineum
TPR.G11298 Trifolium pratense
TPR.G34075 Trifolium pratense
TPR.G36791 Trifolium pratense
TPR.G38090 Trifolium pratense
unitig_699.g19913 Utricularia gibba
unitig_8.g3960 Utricularia gibba
VMungo0251G1914 Vigna mungo
VMungo0251G3339 Vigna mungo
Zm00001eb408540 Zea mays

User provided reference genes

Program Settings