Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36880 Brassica napus
A05p38190 Brassica napus
A10p30750 Brassica napus
Aa31LG11G6600 Aethionema arabicum
Aa31LG3G4050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5535 Anthoceros agrestis
Actinidia00666 Actinidia chinensis
Actinidia00965 Actinidia chinensis
Actinidia29712 Actinidia chinensis
Actinidia33913 Actinidia chinensis
Ah.10g036320 Amaranthus hybridus
AL1G36960 Arabidopsis lyrata
AL1G36980 Arabidopsis lyrata
AL3G22610 Arabidopsis lyrata
AL6G15410 Arabidopsis lyrata
Aqoxy3G01449 Aquilegia oxysepala
Aqoxy6G00293 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4HSV53 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G3A1I6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQTL6G Arachis hypogaea
AT3G11070 Arabidopsis thaliana
AT5G05520 Arabidopsis thaliana
ATR0174G024 Amborella trichopoda
Atru.chr12.82 Acer truncatum
AUR62012283 Chenopodium quinoa
AUR62022923 Chenopodium quinoa
BcaB04g18621 Brassica carinata
BcaC01g04146 Brassica carinata
BcaC05g29397 Brassica carinata
BcaC05g29399 Brassica carinata
BcaC06g32264 Brassica carinata
BcaC06g32265 Brassica carinata
BcaNung07345 Brassica carinata
BolC3t16730H Brassica oleracea
BolC5t34363H Brassica oleracea
BolC9t59885H Brassica oleracea
BraA03t12851Z Brassica rapa
BraA05t22612Z Brassica rapa
BraA10t45116Z Brassica rapa
C03p44680 Brassica napus
C05p57000 Brassica napus
C09p71240 Brassica napus
CAN.G371.42 Capsicum annuum
CANSAT56G1623 Cannabis sativa
CARHR085650 Cardamine hirsuta
CARHR207750 Cardamine hirsuta
Carub.0003s1036 Capsella rubella
Carub.0006s0442 Capsella rubella
Ca_05980_v3 Cicer arietinum L.
Ca_15145_v3 Cicer arietinum L.
CBR_g20300 Chara braunii
Cc02_g06150 Coffea canephora
CDE04G2434 Ceratophyllum demersum
CDE04G2567 Ceratophyllum demersum
CDE07G0185 Ceratophyllum demersum
Cfa001291 Carpinus fangiana
Ciclev10031211m.g Citrus clementina
CiPaw.02G194700 Carya illinoinensis
ClCG08G007680 Citrullus lanatus
COL.COLO4_09432 Corchorus olitorius
COL.COLO4_25774 Corchorus olitorius
Cpa.g.sc19.146 Carica papaya
Cre06.g308900 Chlamydomonas reinhardtii
CsaV3_6G036670 Cucumis sativus L.
CSS0027209 Camellia sinensis var. sinensis
CSS0030356 Camellia sinensis var. sinensis
DCAR_011834 Daucus carota
DCAR_024813 Daucus carota
Dinv10598 Davidia involucrata
Dinv21759 Davidia involucrata
Duzib114G0409 Durio zibethinus
Duzib168G0885 Durio zibethinus
Duzib268G1065 Durio zibethinus
ECA233G5125 Erigeron canadensis
ECA238G0968 Erigeron canadensis
EL10Ac1g02349 Beta vulgaris
EL10Ac2g04875 Beta vulgaris
EL10Ac8g20606 Beta vulgaris
Eucgr.J00180 Eucalyptus grandis
FAN01G0548 Fragaria x ananassa
FAN03G3165 Fragaria x ananassa
FAN06G2060 Fragaria x ananassa
FAN10G0447 Fragaria x ananassa
FvH4_7g24890 Fragaria vesca
Glyma.02G264000 Glycine max
Glyma.11G231800 Glycine max
Glyma.14G057500 Glycine max
Glyma.18G025400 Glycine max
Gohir.A01G065600 Gossypium hirsutum
Gohir.A06G162400 Gossypium hirsutum
Gohir.D01G053000 Gossypium hirsutum
Gohir.D06G167900 Gossypium hirsutum
Gorai.002G072800 Gossypium raimondii
Gorai.010G195800 Gossypium raimondii
GSVIVG01032775001 Vitis vinifera
HanXRQChr15g0468181 Helianthus annuus
Haze_17258 Corylus avellana
Hma1.2p1_0292F.1_g115500 Hydrangea macrophylla
Hma1.2p1_0523F.1_g172025 Hydrangea macrophylla
Hma1.2p1_3227F.1_g334190 Hydrangea macrophylla
Hma1.2p1_3227F.1_g334210 Hydrangea macrophylla
Hma1.2p1_3227F.1_g334220 Hydrangea macrophylla
HPP92_019170 Vanilla planifolia
Hund09485 Selenicereus undatus
Hund14188 Selenicereus undatus
Hund15896 Selenicereus undatus
Lalb_Chr04g0250461 Lupinus albus
Lalb_Chr08g0231571 Lupinus albus
Lalb_Chr11g0075031 Lupinus albus
Lalb_Chr23g0277031 Lupinus albus
Lj6g0014357 Lotus japonicus
Lj8C63G9 Lonicera japonica
Lsat_1_v5_gn_2_124241 Lactuca sativa
Lsat_1_v5_gn_8_12801 Lactuca sativa
Manes.07G132600 Manihot esculenta
Manes.10G009900 Manihot esculenta
Mapoly0004s0190 Marchantia polymorpha
MBI15_g21767_MAGBIO Magnolia biondii
MCO09G860 Micromonas commoda
MD01G1156600 Malus domestica
MD07G1225300 Malus domestica
Medtr3g071450 Medicago truncatula
Medtr5g083050 Medicago truncatula
MELO3C019821.2 Cucumis melo
Migut.F00656 Erythranthe guttata
MSTRG.27311 Avicennia marina
MSTRG.7407 Avicennia marina
MSTRG.8935 Avicennia marina
Nitab4.5_0000068g0540 Nicotiana tabacum
Nitab4.5_0002212g0010 Nicotiana tabacum
Nn2g10952 Nelumbo nucifera
Nn2g13222 Nelumbo nucifera
Oeu011113.1 Olea europaea
Oeu051627.1 Olea europaea
Oeu059714.1 Olea europaea
Os05g0470800 Oryza sativa ssp. japonica
Os11g0106200 Oryza sativa ssp. japonica
Os12g0105700 Oryza sativa ssp. japonica
Peaxi162Scf00284g00618 Petunia axillaris
PGR044G2674 Punica granatum
PGSC0003DMG400008029 Solanum tuberosum
Phvul.001G245000 Phaseolus vulgaris
Phvul.008G222000 Phaseolus vulgaris
Potri.008G071800 Populus trichocarpa
Potri.010G185600 Populus trichocarpa
Pp3c10_24660 Physcomitrium patens
Pp3c23_13400 Physcomitrium patens
Pp3c24_2700 Physcomitrium patens
PRCOL_00004745 Prasinoderma coloniale
Prupe.2G254100 Prunus persica
Psat2g030840 Pisum sativum
Psat5g130400 Pisum sativum
PSO017G1559 Papaver somniferum
PSO339G5029 Papaver somniferum
PSO349G0167 Papaver somniferum
PSO801G0312 Papaver somniferum
QL08p063564 Quercus lobata
RcHm_v2.0_Chr1g0370771 Rosa chinensis
Rhsim03G0145600 Rhododendron simsii
Rhsim09G0179400 Rhododendron simsii
Sabra08G0053100 Salix brachista
Sabra10G0142800 Salix brachista
SalBow3G2537 Salvia bowleyana
Sc11g0005230 Simmondsia chinensis
Sed0016246 Sechium edule
Sed0026105 Sechium edule
SEGI_19345 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16666 Striga asiatica
SGA_v2.0_scaffold60G20972 Striga asiatica
SHI28826 Sapria himalayana
SMO367G0726 Selaginella moellendorffii
Solyc04g079270.4 Solanum lycopersicum
Sopen04g032860 Solanum pennellii
Sp3g09400 Schrenkiella parvula
Sp6g37330 Schrenkiella parvula
TAR369G0227 Trochodendron aralioides
TAR636G2202 Trochodendron aralioides
THA.LOC104816537 Tarenaya hassleriana
THA.LOC104826843 Tarenaya hassleriana
Thecc.07G077200 Theobroma cacao
Thecc.10G012500 Theobroma cacao
Thhalv10013229m.g Eutrema salsugineum
Thhalv10020523m.g Eutrema salsugineum
TPR.G18927 Trifolium pratense
TPR.G38453 Trifolium pratense
TWI18G0963 Tripterygium wilfordii
unitig_0.g248 Utricularia gibba
unitig_22.g5366 Utricularia gibba
unitig_8.g3812 Utricularia gibba
vmacro06955 Vaccinium macrocarpon
vmacro10022 Vaccinium macrocarpon
VMungo0647G1501 Vigna mungo
VMungo1383G3146 Vigna mungo
Zm00001eb135010 Zea mays
Zm00001eb194980 Zea mays
Zm00001eb351830 Zea mays
Zm00001eb368460 Zea mays
Zm00001eb404840 Zea mays

User provided reference genes

Program Settings