Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04260 Brassica napus
A03p62660 Brassica napus
A08p17030 Brassica napus
Aa31LG2G16640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2700 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2763 Anthoceros agrestis
Actinidia07920 Actinidia chinensis
Actinidia07921 Actinidia chinensis
Actinidia31263 Actinidia chinensis
Ah.04g159350 Amaranthus hybridus
AL5G22780 Arabidopsis lyrata
AL5G22860 Arabidopsis lyrata
AL7G17190 Arabidopsis lyrata
AL7G17200 Arabidopsis lyrata
Aqoxy2G01953 Aquilegia oxysepala
Aqoxy6G03064 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CZ7R53 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4HYIQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K5ZCN3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9GKNP Arachis hypogaea
AT3G42050 Arabidopsis thaliana
ATR0743G255 Amborella trichopoda
ATR0794G033 Amborella trichopoda
ATR0794G079 Amborella trichopoda
ATR0794G121 Amborella trichopoda
Atru.chr12.1913 Acer truncatum
AUR62000266 Chenopodium quinoa
AUR62006614 Chenopodium quinoa
BcaB03g11847 Brassica carinata
BcaC01g00920 Brassica carinata
BcaNung03365 Brassica carinata
BcaNung03800 Brassica carinata
BolC1t00448H Brassica oleracea
BolC7t46462H Brassica oleracea
BraA01t00415Z Brassica rapa
BraA03t15336Z Brassica rapa
BraA08t33665Z Brassica rapa
C01p04650 Brassica napus
C03p85940 Brassica napus
C07p60210 Brassica napus
CAN.G1610.2 Capsicum annuum
CANSAT21G2378 Cannabis sativa
CANSAT35G0024 Cannabis sativa
CANSAT35G0263 Cannabis sativa
CANSAT56G1635 Cannabis sativa
CARHR242660 Cardamine hirsuta
CARHR242670 Cardamine hirsuta
Carub.0007s0621 Capsella rubella
Ca_22246_v3 Cicer arietinum L.
CBR_g3526 Chara braunii
Cc09_g04230 Coffea canephora
Cc09_g04240 Coffea canephora
CDE02G0117 Ceratophyllum demersum
CDE02G3771 Ceratophyllum demersum
CDE04G1479 Ceratophyllum demersum
CDE04G3472 Ceratophyllum demersum
Cfa016067 Carpinus fangiana
Cfa024478 Carpinus fangiana
Ciclev10031531m.g Citrus clementina
Ciclev10032936m.g Citrus clementina
Ciclev10033985m.g Citrus clementina
CiPaw.05G214600 Carya illinoinensis
ClCG10G016340 Citrullus lanatus
COL.COLO4_15183 Corchorus olitorius
Cpa.g.sc43.106 Carica papaya
Cre01.g027800 Chlamydomonas reinhardtii
CsaV3_3G040000 Cucumis sativus L.
CSS0045568 Camellia sinensis var. sinensis
DCAR_002085 Daucus carota
DCAR_023762 Daucus carota
Dinv17142 Davidia involucrata
Duzib106G0604 Durio zibethinus
Duzib177G0664 Durio zibethinus
ECA233G0769 Erigeron canadensis
EL10Ac4g10031 Beta vulgaris
Eucgr.H02340 Eucalyptus grandis
FAN01G2089 Fragaria x ananassa
FAN03G3412 Fragaria x ananassa
FAN08G1651 Fragaria x ananassa
FAN10G2135 Fragaria x ananassa
FAN18G0534 Fragaria x ananassa
FvH4_5g39390 Fragaria vesca
FvH4_7g34170 Fragaria vesca
Glyma.02G059800 Glycine max
Glyma.16G142600 Glycine max
Gohir.A02G127200 Gossypium hirsutum
Gohir.A08G221656 Gossypium hirsutum
Gohir.D03G053800 Gossypium hirsutum
Gohir.D08G241000 Gossypium hirsutum
Gorai.003G056300 Gossypium raimondii
Gorai.004G256400 Gossypium raimondii
GSVIVG01024344001 Vitis vinifera
HanXRQChr13g0401211 Helianthus annuus
Haze_00382 Corylus avellana
HPP92_007347 Vanilla planifolia
Hund07385 Selenicereus undatus
Hund21933 Selenicereus undatus
Lalb_Chr05g0227421 Lupinus albus
Lalb_Chr09g0333641 Lupinus albus
Lj2C606G3 Lonicera japonica
Lj2g0002798 Lotus japonicus
Lj4A843G12 Lonicera japonica
Lj4g0025932 Lotus japonicus
Lsat_1_v5_gn_2_1040 Lactuca sativa
Lsat_1_v5_gn_6_25940 Lactuca sativa
Manes.08G064200 Manihot esculenta
Manes.09G128600 Manihot esculenta
Mapoly0102s0002 Marchantia polymorpha
MBI07_g36707_MAGBIO Magnolia biondii
MBI07_g38305_MAGBIO Magnolia biondii
MCO09G349 Micromonas commoda
MD01G1238200 Malus domestica
MD01G1238500 Malus domestica
MD07G1310400 Malus domestica
Medtr8g078370 Medicago truncatula
MELO3C009742.2 Cucumis melo
Migut.F01837 Erythranthe guttata
Migut.F02084 Erythranthe guttata
MSTRG.344 Avicennia marina
MSTRG.8187 Avicennia marina
Nitab4.5_0002329g0200 Nicotiana tabacum
Nitab4.5_0003759g0020 Nicotiana tabacum
Nitab4.5_0006810g0020 Nicotiana tabacum
Nitab4.5_0008310g0020 Nicotiana tabacum
Nn7g37514 Nelumbo nucifera
Oeu001224.1 Olea europaea
Oeu007683.1 Olea europaea
Oeu062031.1 Olea europaea
Os07g0549700 Oryza sativa ssp. japonica
Peaxi162Scf00062g00013 Petunia axillaris
Peaxi162Scf01313g00235 Petunia axillaris
PGR042G1782 Punica granatum
PGR142G0137 Punica granatum
PGSC0003DMG400007911 Solanum tuberosum
PGSC0003DMG401011206 Solanum tuberosum
PGSC0003DMG402011206 Solanum tuberosum
Phvul.003G250866 Phaseolus vulgaris
Phvul.003G250932 Phaseolus vulgaris
Potri.013G078700 Populus trichocarpa
Potri.019G047800 Populus trichocarpa
Pp3c10_2890 Physcomitrium patens
Pp3c1_26980 Physcomitrium patens
Pp3c2_19490 Physcomitrium patens
PRCOL_00001521 Prasinoderma coloniale
Prupe.2G328400 Prunus persica
Psat4g090720 Pisum sativum
Psat4g090760 Pisum sativum
PSO017G5499 Papaver somniferum
PSO675G6576 Papaver somniferum
PSO675G6803 Papaver somniferum
QL09p021203 Quercus lobata
RcHm_v2.0_Chr1g0384521 Rosa chinensis
RcHm_v2.0_Chr3g0478911 Rosa chinensis
Rhsim04G0133100 Rhododendron simsii
Rhsim04G0133200 Rhododendron simsii
Rhsim05G0022700 Rhododendron simsii
Rhsim09G0020400 Rhododendron simsii
Sabra13G0073800 Salix brachista
SalBow1G1076 Salvia bowleyana
SalBow1G2470 Salvia bowleyana
SalBow1G3122 Salvia bowleyana
SalBow1G3564 Salvia bowleyana
SalBow3G0476 Salvia bowleyana
Sc09g0001320 Simmondsia chinensis
Sc16g0010680 Simmondsia chinensis
Sed0014541 Sechium edule
Sed0022579 Sechium edule
Sed0024694 Sechium edule
SEGI_25036 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33217 Striga asiatica
SGA_v2.0_scaffold340G49316 Striga asiatica
SGA_v2.0_scaffold340G49317 Striga asiatica
SGA_v2.0_scaffold83G26364 Striga asiatica
SHI02587 Sapria himalayana
SHI02590 Sapria himalayana
SHI02591 Sapria himalayana
SMO361G0576 Selaginella moellendorffii
Solyc07g005940.4 Solanum lycopersicum
Solyc12g009890.3 Solanum lycopersicum
Sopen07g002070 Solanum pennellii
Sopen12g004770 Solanum pennellii
Sp7g31930 Schrenkiella parvula
TAR365G0520 Trochodendron aralioides
TAR365G0691 Trochodendron aralioides
TAR636G2465 Trochodendron aralioides
THA.LOC104804387 Tarenaya hassleriana
THA.LOC104819563 Tarenaya hassleriana
Thecc.05G221300 Theobroma cacao
Thhalv10025183m.g Eutrema salsugineum
TWI32G0704 Tripterygium wilfordii
TWI60G0615 Tripterygium wilfordii
unitig_61.g26274 Utricularia gibba
vmacro00759 Vaccinium macrocarpon
vmacro12087 Vaccinium macrocarpon
VMungo0251G0407 Vigna mungo
VMungo0251G1146 Vigna mungo
Zm00001eb106630 Zea mays
Zm00001eb323620 Zea mays

User provided reference genes

Program Settings