Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p13180 Brassica napus
A08p35190 Brassica napus
A08p36540 Brassica napus
A09p67580 Brassica napus
A10p03710 Brassica napus
Aa31LG1G19570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3702 Anthoceros agrestis
Actinidia27265 Actinidia chinensis
AL1G14940 Arabidopsis lyrata
AL4G27800 Arabidopsis lyrata
Aqoxy1G02139 Aquilegia oxysepala
Aqoxy2G04140 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N0VMF0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S34EA0 Arachis hypogaea
AT1G05180 Arabidopsis thaliana
AT2G32410 Arabidopsis thaliana
AT3G25880 Arabidopsis thaliana
ATR0794G065 Amborella trichopoda
Atru.chr6.3185 Acer truncatum
Atru.chr6.3186 Acer truncatum
AUR62032477 Chenopodium quinoa
AUR62043065 Chenopodium quinoa
BcaB02g10470 Brassica carinata
BcaC02g11324 Brassica carinata
BcaC07g36858 Brassica carinata
BcaC07g38277 Brassica carinata
BcaC07g41226 Brassica carinata
BcaC07g42149 Brassica carinata
BcaNung05930 Brassica carinata
BolC3t21144H Brassica oleracea
BolC4t23276H Brassica oleracea
BolC5t29120H Brassica oleracea
BolC8t46978H Brassica oleracea
BolC8t48703H Brassica oleracea
BolC8t51791H Brassica oleracea
BolC8t52726H Brassica oleracea
BraA01t03614Z Brassica rapa
BraA05t20259Z Brassica rapa
BraA08t35428Z Brassica rapa
BraA08t35555Z Brassica rapa
BraA09t42091Z Brassica rapa
BraA10t42644Z Brassica rapa
C04p17240 Brassica napus
C05p03410 Brassica napus
C08p01780 Brassica napus
C08p10240 Brassica napus
C08p42310 Brassica napus
C08p51960 Brassica napus
C09p70480 Brassica napus
CAN.G162.15 Capsicum annuum
CAN.G1651.1 Capsicum annuum
CAN.G335.19 Capsicum annuum
CAN.G553.19 Capsicum annuum
CAN.G80.46 Capsicum annuum
CANSAT64G1323 Cannabis sativa
CARHR004640 Cardamine hirsuta
CARHR095920 Cardamine hirsuta
CARHR126230 Cardamine hirsuta
Carub.0001s0445 Capsella rubella
Carub.0004s1376 Capsella rubella
Ca_12395_v3 Cicer arietinum L.
Ca_26960_v3 Cicer arietinum L.
Ca_29946_v3 Cicer arietinum L.
CBR_g50442 Chara braunii
CBR_g55862 Chara braunii
Cc05_g04590 Coffea canephora
CDE05G2607 Ceratophyllum demersum
CDE11G0886 Ceratophyllum demersum
Cfa014399 Carpinus fangiana
Cfa025539 Carpinus fangiana
Ciclev10014908m.g Citrus clementina
CiPaw.03G159900 Carya illinoinensis
ClCG02G008740 Citrullus lanatus
COL.COLO4_19119 Corchorus olitorius
COL.COLO4_27713 Corchorus olitorius
Cpa.g.sc87.77 Carica papaya
Cre01.g002350 Chlamydomonas reinhardtii
CsaV3_2G034930 Cucumis sativus L.
CSS0017187 Camellia sinensis var. sinensis
CSS0041453 Camellia sinensis var. sinensis
CSS0047283 Camellia sinensis var. sinensis
DCAR_019274 Daucus carota
Dinv39712 Davidia involucrata
Duzib248G0706 Durio zibethinus
Duzib251G0240 Durio zibethinus
ECA232G2998 Erigeron canadensis
EL10Ac8g19506 Beta vulgaris
Eucgr.A01125 Eucalyptus grandis
Eucgr.A01128 Eucalyptus grandis
FAN02G4351 Fragaria x ananassa
FAN05G3766 Fragaria x ananassa
FAN09G3949 Fragaria x ananassa
FAN14G2769 Fragaria x ananassa
FvH4_6g43170 Fragaria vesca
Glyma.06G305800 Glycine max
Glyma.12G098800 Glycine max
Gohir.A03G108400 Gossypium hirsutum
Gohir.D02G133600 Gossypium hirsutum
Gorai.005G149600 Gossypium raimondii
GSVIVG01030423001 Vitis vinifera
HanXRQChr05g0144141 Helianthus annuus
Haze_12863 Corylus avellana
Hma1.2p1_0006F.1_g004690 Hydrangea macrophylla
Hma1.2p1_0032F.1_g018780 Hydrangea macrophylla
Hma1.2p1_0257F.1_g103570 Hydrangea macrophylla
Hma1.2p1_0576F.1_g182010 Hydrangea macrophylla
HPP92_015981 Vanilla planifolia
Hund02040 Selenicereus undatus
Hund02156 Selenicereus undatus
Lalb_Chr19g0135881 Lupinus albus
Lj1C765G0 Lonicera japonica
Lj3g0022714 Lotus japonicus
Lsat_1_v5_gn_9_43200 Lactuca sativa
Manes.12G066600 Manihot esculenta
Manes.12G074303 Manihot esculenta
Mapoly0005s0094 Marchantia polymorpha
Mapoly0067s0008 Marchantia polymorpha
MBI02_g21885_MAGBIO Magnolia biondii
MCO01G723 Micromonas commoda
MD09G1109000 Malus domestica
MD17G1097000 Malus domestica
Medtr4g048220 Medicago truncatula
MELO3C019269.2 Cucumis melo
Migut.M00436 Erythranthe guttata
MSTRG.6579 Avicennia marina
Nitab4.5_0001213g0070 Nicotiana tabacum
Nitab4.5_0006567g0010 Nicotiana tabacum
Nn1g07136 Nelumbo nucifera
Oeu041919.3 Olea europaea
Os03g0820100 Oryza sativa ssp. japonica
Peaxi162Scf00389g00814 Petunia axillaris
PGR042G0375 Punica granatum
PGSC0003DMG400027403 Solanum tuberosum
Phvul.011G103600 Phaseolus vulgaris
Potri.002G229100 Populus trichocarpa
Potri.014G153500 Populus trichocarpa
Pp3c14_7440 Physcomitrium patens
Pp3c2_11270 Physcomitrium patens
PRCOL_00002650 Prasinoderma coloniale
Prupe.3G217100 Prunus persica
Psat0s800g0080 Pisum sativum
Psat1g032280 Pisum sativum
Psat1g032320 Pisum sativum
Psat3g162480 Pisum sativum
Psat3g162520 Pisum sativum
Psat7g157240 Pisum sativum
PSO541G1862 Papaver somniferum
PSO675G5573 Papaver somniferum
QL08p033044 Quercus lobata
RcHm_v2.0_Chr1g0323891 Rosa chinensis
RcHm_v2.0_Chr1g0335231 Rosa chinensis
RcHm_v2.0_Chr2g0118851 Rosa chinensis
RcHm_v2.0_Chr2g0126511 Rosa chinensis
RcHm_v2.0_Chr2g0159271 Rosa chinensis
RcHm_v2.0_Chr3g0476741 Rosa chinensis
RcHm_v2.0_Chr3g0496911 Rosa chinensis
RcHm_v2.0_Chr4g0396851 Rosa chinensis
RcHm_v2.0_Chr5g0011001 Rosa chinensis
RcHm_v2.0_Chr6g0268661 Rosa chinensis
RcHm_v2.0_Chr6g0277741 Rosa chinensis
RcHm_v2.0_Chr6g0280031 Rosa chinensis
RcHm_v2.0_Chr7g0198761 Rosa chinensis
Sabra02G0175100 Salix brachista
Sabra14G0116100 Salix brachista
SalBow7G1393 Salvia bowleyana
Sc21g0001430 Simmondsia chinensis
Sed0015779 Sechium edule
Sed0026537 Sechium edule
SEGI_10475 Sequoiadendron giganteum
SEGI_36291 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13839 Striga asiatica
SGA_v2.0_scaffold70G23396 Striga asiatica
SHI10353 Sapria himalayana
SHI10354 Sapria himalayana
SMO140G0107 Selaginella moellendorffii
Solyc11g072460.2 Solanum lycopersicum
Solyc12g005870.3 Solanum lycopersicum
Sopen11g030100 Solanum pennellii
Sopen12g001820 Solanum pennellii
Sp1g04030 Schrenkiella parvula
Sp4g14780 Schrenkiella parvula
SpUn0024_0110 Schrenkiella parvula
TAR627G1083 Trochodendron aralioides
TAR629G2369 Trochodendron aralioides
THA.LOC104800990 Tarenaya hassleriana
THA.LOC104816043 Tarenaya hassleriana
Thecc.02G314800 Theobroma cacao
Thhalv10007362m.g Eutrema salsugineum
Thhalv10016512m.g Eutrema salsugineum
TPR.G4641 Trifolium pratense
TWI36G1050 Tripterygium wilfordii
unitig_0.g729 Utricularia gibba
vmacro12203 Vaccinium macrocarpon
VMungo1127G2094 Vigna mungo
Zm00001eb062550 Zea mays
Zm00001eb117630 Zea mays
Zm00001eb211770 Zea mays
Zm00001eb284220 Zea mays

User provided reference genes

Program Settings