Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02880 Brassica napus
A10p29610 Brassica napus
Aa31sc24G30 Aethionema arabicum
Actinidia22033 Actinidia chinensis
Actinidia22034 Actinidia chinensis
Actinidia32389 Actinidia chinensis
Actinidia32390 Actinidia chinensis
Ah.08g210350 Amaranthus hybridus
Ah.13g075890 Amaranthus hybridus
Ah.13g075920 Amaranthus hybridus
AL6G16870 Arabidopsis lyrata
Aqoxy1G00978 Aquilegia oxysepala
Aqoxy2G03680 Aquilegia oxysepala
Aqoxy2G03681 Aquilegia oxysepala
Aqoxy3G01469 Aquilegia oxysepala
Aqoxy3G02737 Aquilegia oxysepala
Aqoxy3G02738 Aquilegia oxysepala
Aqoxy6G00181 Aquilegia oxysepala
Aqoxy7G02037 Aquilegia oxysepala
Aqoxy7G02038 Aquilegia oxysepala
Aqoxy7G03903 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00VVAL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6M6V4C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.95S5ZX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BAUA8N Arachis hypogaea
AT5G06760 Arabidopsis thaliana
ATR0605G384 Amborella trichopoda
Atru.chr8.1096 Acer truncatum
Atru.chr8.1104 Acer truncatum
AUR62012039 Chenopodium quinoa
AUR62015378 Chenopodium quinoa
BcaB01g06002 Brassica carinata
BcaB01g06022 Brassica carinata
BcaB01g06026 Brassica carinata
BcaC06g32392 Brassica carinata
BcaC06g32544 Brassica carinata
BcaNung02740 Brassica carinata
BolC3t12872H Brassica oleracea
BolC3t12875H Brassica oleracea
BolC9t59741H Brassica oleracea
BraA03t09652Z Brassica rapa
BraA10t45003Z Brassica rapa
C03p03280 Brassica napus
C03p03320 Brassica napus
C09p69990 Brassica napus
CAN.G1161.29 Capsicum annuum
CAN.G1161.30 Capsicum annuum
CAN.G1161.31 Capsicum annuum
CANSAT64G0020 Cannabis sativa
CARHR206420 Cardamine hirsuta
Carub.0006s0565 Capsella rubella
Ca_05483_v3 Cicer arietinum L.
Ca_08518_v3 Cicer arietinum L.
Ca_25707_v3 Cicer arietinum L.
Cc06_g15970 Coffea canephora
Cc06_g15980 Coffea canephora
CDE06G2670 Ceratophyllum demersum
Cfa020169 Carpinus fangiana
Cfa020171 Carpinus fangiana
Cfa020173 Carpinus fangiana
Cfa020175 Carpinus fangiana
Ciclev10012978m.g Citrus clementina
Ciclev10013073m.g Citrus clementina
ClCG04G002110 Citrullus lanatus
ClCG10G017480 Citrullus lanatus
COL.COLO4_33991 Corchorus olitorius
Cpa.g.sc85.72 Carica papaya
CsaV3_3G038880 Cucumis sativus L.
CsaV3_4G030630 Cucumis sativus L.
CSS0008876 Camellia sinensis var. sinensis
DCAR_013554 Daucus carota
DCAR_019788 Daucus carota
Dinv14293 Davidia involucrata
Dinv14294 Davidia involucrata
Dinv24076 Davidia involucrata
ECA236G0537 Erigeron canadensis
ECA247G3621 Erigeron canadensis
EL10Ac3g06923 Beta vulgaris
Eucgr.K01836 Eucalyptus grandis
FAN02G3232 Fragaria x ananassa
FAN14G5712 Fragaria x ananassa
FvH4_6g22410 Fragaria vesca
Glyma.03G144400 Glycine max
Glyma.09G112100 Glycine max
Glyma.19G147200 Glycine max
Gohir.A01G191700 Gossypium hirsutum
Gohir.D01G178300 Gossypium hirsutum
Gorai.002G224800 Gossypium raimondii
GSVIVG01033503001 Vitis vinifera
GSVIVG01033504001 Vitis vinifera
GSVIVG01033505001 Vitis vinifera
HanXRQChr02g0048381 Helianthus annuus
HanXRQChr05g0132881 Helianthus annuus
HanXRQChr10g0300671 Helianthus annuus
Haze_19981 Corylus avellana
Haze_19983 Corylus avellana
Hma1.2p1_0386F.1_g141820 Hydrangea macrophylla
Lalb_Chr04g0261031 Lupinus albus
Lalb_Chr15g0078981 Lupinus albus
Lj1g0001300 Lotus japonicus
Lj5g0013312 Lotus japonicus
Lsat_1_v5_gn_5_146120 Lactuca sativa
Lsat_1_v5_gn_8_74401 Lactuca sativa
Lsat_1_v5_gn_8_75321 Lactuca sativa
Lsat_1_v5_gn_9_26540 Lactuca sativa
Manes.08G044900 Manihot esculenta
Manes.09G034800 Manihot esculenta
MBI04_g14513_MAGBIO Magnolia biondii
MBI04_g39831_MAGBIO Magnolia biondii
MD12G1057800 Malus domestica
Medtr1g053970 Medicago truncatula
Medtr7g093140 Medicago truncatula
Medtr7g093160 Medicago truncatula
Medtr7g093170 Medicago truncatula
MELO3C008930.2 Cucumis melo
MELO3C009631.2 Cucumis melo
Migut.J01829 Erythranthe guttata
MSTRG.19903 Avicennia marina
Nitab4.5_0000105g0070 Nicotiana tabacum
Nitab4.5_0000105g0080 Nicotiana tabacum
Nitab4.5_0000105g0090 Nicotiana tabacum
Nitab4.5_0000105g0100 Nicotiana tabacum
Nitab4.5_0000105g0110 Nicotiana tabacum
Nitab4.5_0000324g0070 Nicotiana tabacum
Nitab4.5_0000324g0100 Nicotiana tabacum
Nitab4.5_0001538g0010 Nicotiana tabacum
Nitab4.5_0001538g0030 Nicotiana tabacum
Nitab4.5_0002343g0050 Nicotiana tabacum
Nitab4.5_0008334g0020 Nicotiana tabacum
Nitab4.5_0008334g0040 Nicotiana tabacum
Nn7g36015 Nelumbo nucifera
Oeu007767.1 Olea europaea
Oeu033740.1 Olea europaea
Os08g0327700 Oryza sativa ssp. japonica
Os09g0278000 Oryza sativa ssp. japonica
Peaxi162Scf00003g04336 Petunia axillaris
Peaxi162Scf00003g04337 Petunia axillaris
Peaxi162Scf00003g04347 Petunia axillaris
Peaxi162Scf00258g00520 Petunia axillaris
PGR142G0291 Punica granatum
PGR142G2110 Punica granatum
PGSC0003DMG400011437 Solanum tuberosum
PGSC0003DMG400011438 Solanum tuberosum
PGSC0003DMG400011439 Solanum tuberosum
Phvul.001G142000 Phaseolus vulgaris
Phvul.001G143100 Phaseolus vulgaris
Phvul.007G259400 Phaseolus vulgaris
Potri.016G046350 Populus trichocarpa
Prupe.7G076400 Prunus persica
Psat0s797g0160 Pisum sativum
Psat0s797g0240 Pisum sativum
Psat3g068920 Pisum sativum
Psat6g120960 Pisum sativum
PSO017G1578 Papaver somniferum
PSO170G2585 Papaver somniferum
PSO339G4457 Papaver somniferum
QL07p023622 Quercus lobata
RcHm_v2.0_Chr3g0479771 Rosa chinensis
Rhsim03G0006300 Rhododendron simsii
Rhsim03G0006400 Rhododendron simsii
Sabra16G0050300 Salix brachista
SalBow1G8531 Salvia bowleyana
SalBow4G2804 Salvia bowleyana
Sc19g0007020 Simmondsia chinensis
Sc19g0007030 Simmondsia chinensis
Sed0013894 Sechium edule
Sed0015125 Sechium edule
Sed0019071 Sechium edule
SGA_v2.0_scaffold105G30485 Striga asiatica
Solyc03g058330.3 Solanum lycopersicum
Solyc10g078760.2 Solanum lycopersicum
Solyc10g078770.2 Solanum lycopersicum
Solyc10g078780.2 Solanum lycopersicum
Sopen03g011930 Solanum pennellii
Sopen10g029380 Solanum pennellii
Sopen10g029390 Solanum pennellii
Sopen10g029400 Solanum pennellii
Sp6g36090 Schrenkiella parvula
TAR623G1118 Trochodendron aralioides
THA.LOC104799298 Tarenaya hassleriana
THA.LOC104826769 Tarenaya hassleriana
Thecc.05G170800 Theobroma cacao
Thhalv10014897m.g Eutrema salsugineum
TPR.G18942 Trifolium pratense
TPR.G27745 Trifolium pratense
TPR.G27779 Trifolium pratense
TPR.G435 Trifolium pratense
TWI53G0478 Tripterygium wilfordii
TWI74G0976 Tripterygium wilfordii
TWI77G0090 Tripterygium wilfordii
unitig_899.g15079 Utricularia gibba
vmacro07911 Vaccinium macrocarpon
vmacro07912 Vaccinium macrocarpon
vmacro23395 Vaccinium macrocarpon
VMungo0720G0768 Vigna mungo
VMungo1383G0066 Vigna mungo
VMungo1383G0252 Vigna mungo
Zm00001eb308610 Zea mays
Zm00001eb414650 Zea mays

User provided reference genes

Program Settings