Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p43620 Brassica napus
Aa31LG1G15390 Aethionema arabicum
Aa31LG4G18760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2914 Anthoceros agrestis
Actinidia02767 Actinidia chinensis
Actinidia02768 Actinidia chinensis
Actinidia16507 Actinidia chinensis
Ah.10g029820 Amaranthus hybridus
Ah.10g029830 Amaranthus hybridus
AL5G30740 Arabidopsis lyrata
Aqoxy6G01408_Aqoxy6G01409 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B7G4FR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IHL9QQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZBDE9H Arachis hypogaea
AT3G50590 Arabidopsis thaliana
ATR0021G056 Amborella trichopoda
Atru.chr3.398 Acer truncatum
AUR62031680 Chenopodium quinoa
AUR62032563 Chenopodium quinoa
BcaB01g00607 Brassica carinata
BcaB02g09979 Brassica carinata
BcaB02g09980 Brassica carinata
BcaC07g39520 Brassica carinata
BcaC09g50042 Brassica carinata
BolC1t02908H Brassica oleracea
BolC8t50184H Brassica oleracea
BraA09t39823Z Brassica rapa
C01p29660 Brassica napus
C08p25650 Brassica napus
CAN.G836.66 Capsicum annuum
CANSAT01G2969 Cannabis sativa
CARHR160100 Cardamine hirsuta
Carub.0005s1691 Capsella rubella
Ca_22188_v3 Cicer arietinum L.
Ca_24784_v3 Cicer arietinum L.
CBR_g11121 Chara braunii
CBR_g239 Chara braunii
Cc07_g05840 Coffea canephora
CDE05G0314 Ceratophyllum demersum
CDE05G0324 Ceratophyllum demersum
CDE05G0336 Ceratophyllum demersum
CDE05G0341 Ceratophyllum demersum
CDE05G0727 Ceratophyllum demersum
CDE05G1509 Ceratophyllum demersum
CDE05G2519 Ceratophyllum demersum
Cfa003996 Carpinus fangiana
Ciclev10024690m.g Citrus clementina
CiPaw.01G021600 Carya illinoinensis
ClCG02G012690 Citrullus lanatus
COL.COLO4_11380 Corchorus olitorius
COL.COLO4_18252 Corchorus olitorius
Cpa.g.sc6.378 Carica papaya
Cpa.g.sc6.380 Carica papaya
Cre08.g366150 Chlamydomonas reinhardtii
CsaV3_2G016800 Cucumis sativus L.
CSS0011380 Camellia sinensis var. sinensis
CSS0024619 Camellia sinensis var. sinensis
DCAR_011292 Daucus carota
Dinv39875 Davidia involucrata
Duzib147G1293 Durio zibethinus
Duzib187G1677 Durio zibethinus
ECA232G3039 Erigeron canadensis
EL10Ac2g02707 Beta vulgaris
EL10Ac2g02709 Beta vulgaris
Eucgr.F01659 Eucalyptus grandis
Eucgr.F02662 Eucalyptus grandis
FAN19G0078 Fragaria x ananassa
FAN23G2700 Fragaria x ananassa
FAN26G2684 Fragaria x ananassa
FAN28G0748 Fragaria x ananassa
FvH4_1g15690 Fragaria vesca
Glyma.01G184500 Glycine max
Glyma.05G090500 Glycine max
Glyma.11G057700 Glycine max
Glyma.17G176300 Glycine max
Gohir.A11G190301 Gossypium hirsutum
Gohir.A11G190351 Gossypium hirsutum
Gohir.A12G070200 Gossypium hirsutum
Gohir.D11G197000 Gossypium hirsutum
Gohir.D11G197100 Gossypium hirsutum
Gohir.D12G088600 Gossypium hirsutum
Gorai.007G210900 Gossypium raimondii
Gorai.007G211000 Gossypium raimondii
Gorai.008G074500 Gossypium raimondii
GSVIVG01002593001 Vitis vinifera
GSVIVG01002902001 Vitis vinifera
GSVIVG01004485001 Vitis vinifera
GSVIVG01004639001 Vitis vinifera
GSVIVG01006575001 Vitis vinifera
HanXRQChr14g0430631 Helianthus annuus
Haze_15428 Corylus avellana
Hma1.2p1_0767F.1_g215490 Hydrangea macrophylla
Hma1.2p1_0979F.1_g243630 Hydrangea macrophylla
Hma1.2p1_1179F.1_g264490 Hydrangea macrophylla
Hma1.2p1_1744F.1_g300230 Hydrangea macrophylla
HPP92_006173 Vanilla planifolia
HPP92_006174 Vanilla planifolia
HPP92_006187 Vanilla planifolia
HPP92_006266 Vanilla planifolia
HPP92_006267 Vanilla planifolia
HPP92_008982 Vanilla planifolia
Hund13496 Selenicereus undatus
Hund13566 Selenicereus undatus
Hund13567 Selenicereus undatus
Lalb_Chr09g0323031 Lupinus albus
Lalb_Chr09g0323051 Lupinus albus
Lalb_Chr16g0388361 Lupinus albus
Lalb_Chr16g0388371 Lupinus albus
Lj2g0013536 Lotus japonicus
Lj4C140G3 Lonicera japonica
Lj4g0022564 Lotus japonicus
Lsat_1_v5_gn_4_167420 Lactuca sativa
Lsat_1_v5_gn_5_99081 Lactuca sativa
Manes.12G101600 Manihot esculenta
Manes.13G126200 Manihot esculenta
Mapoly0038s0024 Marchantia polymorpha
Mapoly0072s0002 Marchantia polymorpha
MD02G1168900 Malus domestica
MD15G1280900 Malus domestica
Medtr5g017800 Medicago truncatula
Medtr5g017810 Medicago truncatula
Medtr8g079820 Medicago truncatula
MELO3C020891.2 Cucumis melo
Migut.H00454 Erythranthe guttata
MSTRG.23766 Avicennia marina
Nitab4.5_0000310g0180 Nicotiana tabacum
Nitab4.5_0000961g0120 Nicotiana tabacum
Nn1g05856 Nelumbo nucifera
Nn5g30194 Nelumbo nucifera
Oeu049304.1 Olea europaea
Os09g0407950 Oryza sativa ssp. japonica
Os09g0408000 Oryza sativa ssp. japonica
Peaxi162Scf00691g00516 Petunia axillaris
Peaxi162Scf00916g00135 Petunia axillaris
PGR119G1381 Punica granatum
Phvul.002G020500 Phaseolus vulgaris
Phvul.003G245800 Phaseolus vulgaris
Potri.005G136300 Populus trichocarpa
Potri.007G041000 Populus trichocarpa
Pp3c3_22080 Physcomitrium patens
Prupe.4G278100 Prunus persica
Prupe.7G136400 Prunus persica
Psat0s3076g0120 Pisum sativum
Psat0s3352g0120 Pisum sativum
Psat0ss9382g0080 Pisum sativum
Psat2g165400 Pisum sativum
Psat4g087800 Pisum sativum
Psat4g095840 Pisum sativum
Psat4g129920 Pisum sativum
Psat4g191000 Pisum sativum
Psat5g056680 Pisum sativum
Psat5g173160 Pisum sativum
Psat6g176120 Pisum sativum
Psat7g159840 Pisum sativum
PSO541G5504 Papaver somniferum
PSO675G6314 Papaver somniferum
QL06p042284 Quercus lobata
QL06p042301 Quercus lobata
QL06p042317 Quercus lobata
RcHm_v2.0_Chr2g0105001 Rosa chinensis
Rhsim03G0142800 Rhododendron simsii
Rhsim06G0113700 Rhododendron simsii
Rhsim08G0102200 Rhododendron simsii
RhsimUnG0101300 Rhododendron simsii
Sabra07G0036700 Salix brachista
SalBow5G2384 Salvia bowleyana
Sc03g0001420 Simmondsia chinensis
Sed0012547 Sechium edule
SEGI_22339 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07262 Striga asiatica
SHI23020 Sapria himalayana
SHI23026 Sapria himalayana
SHI23027 Sapria himalayana
SMO014G0036 Selaginella moellendorffii
SMO304G0043 Selaginella moellendorffii
SMO304G0064 Selaginella moellendorffii
Solyc02g090570.4 Solanum lycopersicum
Sopen02g035220 Solanum pennellii
Sp5g11620 Schrenkiella parvula
TAR376G0307 Trochodendron aralioides
TAR381G0144 Trochodendron aralioides
THA.LOC104819223 Tarenaya hassleriana
Thecc.01G052400 Theobroma cacao
Thhalv10010058m.g Eutrema salsugineum
TPR.G19005 Trifolium pratense
TPR.G19029 Trifolium pratense
TPR.G31102 Trifolium pratense
TWI53G0909 Tripterygium wilfordii
unitig_27.g25322 Utricularia gibba
unitig_27.g25323 Utricularia gibba
vmacro17935 Vaccinium macrocarpon
vmacro17936 Vaccinium macrocarpon
VMungo0251G1968 Vigna mungo
VMungo0251G2411 Vigna mungo
VMungo0251G2917 Vigna mungo
VMungo1215G0393 Vigna mungo
VMungo1215G2578 Vigna mungo
VMungo1215G2721 Vigna mungo
Zm00001eb051800 Zea mays

User provided reference genes

Program Settings