Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p29570 Brassica napus
A06p46240 Brassica napus
Aa31LG9G6880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.301 Anthoceros agrestis
Ah.09g237750 Amaranthus hybridus
AL8G12520 Arabidopsis lyrata
Aqoxy1G02243 Aquilegia oxysepala
Aqoxy2G03585 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6T1YLT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ICFM41 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JCGS1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KS62Q6 Arachis hypogaea
AT5G46020 Arabidopsis thaliana
ATR0602G191 Amborella trichopoda
Atru.chr10.1756 Acer truncatum
Atru.chr2.2349 Acer truncatum
AUR62014899 Chenopodium quinoa
AUR62031106 Chenopodium quinoa
BcaB07g30864 Brassica carinata
BcaC03g16818 Brassica carinata
BcaC04g21739 Brassica carinata
BcaC06g31504 Brassica carinata
BcaC06g34384 Brassica carinata
BolC2t10739H Brassica oleracea
BolC7t43464H Brassica oleracea
BraA02t07983Z Brassica rapa
BraA06t27488Z Brassica rapa
C02p46910 Brassica napus
C07p29220 Brassica napus
C09p28150 Brassica napus
CAN.G79.79 Capsicum annuum
CANSAT35G0946 Cannabis sativa
CARHR175920 Cardamine hirsuta
Carub.0008s0191 Capsella rubella
Ca_00377_v3 Cicer arietinum L.
Ca_00401_v3 Cicer arietinum L.
Ca_18614_v3 Cicer arietinum L.
Ca_30604_v3 Cicer arietinum L.
CBR_g16166 Chara braunii
Cc02_g14180 Coffea canephora
CDE02G2062 Ceratophyllum demersum
CDE09G0432 Ceratophyllum demersum
Cfa000547 Carpinus fangiana
Cfa025877 Carpinus fangiana
Ciclev10009748m.g Citrus clementina
Ciclev10016983m.g Citrus clementina
CiPaw.11G165900 Carya illinoinensis
CiPaw.12G116100 Carya illinoinensis
ClCG01G023390 Citrullus lanatus
COL.COLO4_07498 Corchorus olitorius
COL.COLO4_30865 Corchorus olitorius
Cpa.g.sc841.3 Carica papaya
CsaV3_6G050520 Cucumis sativus L.
CSS0000003 Camellia sinensis var. sinensis
CSS0002242 Camellia sinensis var. sinensis
CSS0048128 Camellia sinensis var. sinensis
DCAR_006581 Daucus carota
DCAR_028035 Daucus carota
Duzib160G0603 Durio zibethinus
Duzib170G0437 Durio zibethinus
Duzib192G0658 Durio zibethinus
Duzib213G0833 Durio zibethinus
Duzib235G0342 Durio zibethinus
ECA234G4324 Erigeron canadensis
EL10Ac8g20460 Beta vulgaris
FAN01G1156 Fragaria x ananassa
FAN03G2115 Fragaria x ananassa
FAN06G2561 Fragaria x ananassa
FAN11G2340 Fragaria x ananassa
FAN11G3375 Fragaria x ananassa
FAN16G0342 Fragaria x ananassa
FAN16G1189 Fragaria x ananassa
FAN21G3894 Fragaria x ananassa
FAN25G2053 Fragaria x ananassa
FAN25G3112 Fragaria x ananassa
FvH4_3g08340 Fragaria vesca
FvH4_3g08350 Fragaria vesca
FvH4_3g19100 Fragaria vesca
FvH4_7g03420 Fragaria vesca
Glyma.10G069300 Glycine max
Glyma.13G152372 Glycine max
Gohir.A01G059900 Gossypium hirsutum
Gohir.A04G037300 Gossypium hirsutum
Gohir.A10G028800 Gossypium hirsutum
Gohir.A13G147700 Gossypium hirsutum
Gohir.D01G046300 Gossypium hirsutum
Gohir.D05G346500 Gossypium hirsutum
Gohir.D10G029200 Gossypium hirsutum
Gohir.D13G152368 Gossypium hirsutum
Gorai.002G065700 Gossypium raimondii
Gorai.009G374400 Gossypium raimondii
Gorai.011G031100 Gossypium raimondii
Gorai.013G172200 Gossypium raimondii
GSVIVG01009894001 Vitis vinifera
GSVIVG01021141001 Vitis vinifera
HanXRQChr16g0518571 Helianthus annuus
HanXRQChr17g0561771 Helianthus annuus
Haze_06331 Corylus avellana
Haze_09374 Corylus avellana
Haze_09825 Corylus avellana
Hma1.2p1_1465F.1_g285360 Hydrangea macrophylla
Hma1.2p1_2004F.1_g310820 Hydrangea macrophylla
HPP92_024584 Vanilla planifolia
Hund21199 Selenicereus undatus
Lalb_Chr03g0030831 Lupinus albus
Lalb_Chr09g0327891 Lupinus albus
Lalb_Chr15g0089601 Lupinus albus
Lalb_Chr18g0059311 Lupinus albus
Lalb_Chr20g0121441 Lupinus albus
Lj1A1199T44 Lonicera japonica
Lj4g0012011 Lotus japonicus
Lj6g0016596 Lotus japonicus
Lsat_1_v5_gn_4_51640 Lactuca sativa
Manes.03G104100 Manihot esculenta
Manes.16G033800 Manihot esculenta
Mapoly0007s0163 Marchantia polymorpha
MBI06_g34195_MAGBIO Magnolia biondii
MD03G1236800 Malus domestica
MD05G1307600 Malus domestica
MD10G1286800 Malus domestica
MD11G1257500 Malus domestica
Medtr2g014950 Medicago truncatula
Medtr4g088110 Medicago truncatula
MELO3C007246.2 Cucumis melo
Migut.M01089 Erythranthe guttata
MSTRG.14718 Avicennia marina
MSTRG.15837 Avicennia marina
MSTRG.7374 Avicennia marina
Nitab4.5_0000376g0010 Nicotiana tabacum
Nitab4.5_0000516g0030 Nicotiana tabacum
Nitab4.5_0001375g0090 Nicotiana tabacum
Nitab4.5_0002227g0060 Nicotiana tabacum
Nn1g04279 Nelumbo nucifera
Nn1g06363 Nelumbo nucifera
Oeu012169.1 Olea europaea
Oeu035453.1 Olea europaea
Oeu046436.1 Olea europaea
Oeu056523.1 Olea europaea
Oeu062323.1 Olea europaea
Os05g0515900 Oryza sativa ssp. japonica
Peaxi162Scf00042g00059 Petunia axillaris
Peaxi162Scf01018g00310 Petunia axillaris
PGR042G3683 Punica granatum
PGSC0003DMG400010727 Solanum tuberosum
Phvul.006G180300 Phaseolus vulgaris
Potri.004G051100 Populus trichocarpa
Potri.011G060800 Populus trichocarpa
Pp3c13_22340 Physcomitrium patens
Pp3c13_22350 Physcomitrium patens
Pp3c26_450 Physcomitrium patens
Prupe.4G054900 Prunus persica
Prupe.4G172600 Prunus persica
Psat1g201440 Pisum sativum
Psat7g117240 Pisum sativum
PSO541G0211 Papaver somniferum
PSO675G6144 Papaver somniferum
QL05p043563 Quercus lobata
QL08p023193 Quercus lobata
RcHm_v2.0_Chr1g0325741 Rosa chinensis
RcHm_v2.0_Chr3g0496141 Rosa chinensis
RcHm_v2.0_Chr5g0009661 Rosa chinensis
RcHm_v2.0_Chr5g0031891 Rosa chinensis
Rhsim02G0137600 Rhododendron simsii
Sabra04G0032200 Salix brachista
Sabra11G0041600 Salix brachista
Sabra16G0246000 Salix brachista
SalBow7G0821 Salvia bowleyana
SalBow7G1387 Salvia bowleyana
SalBow8G3514 Salvia bowleyana
Sc05g0007340 Simmondsia chinensis
Sc17g0005850 Simmondsia chinensis
Sed0002150 Sechium edule
Sed0018895 Sechium edule
SEGI_29868 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07656 Striga asiatica
SMO228G0039 Selaginella moellendorffii
Solyc02g077410.3 Solanum lycopersicum
Sopen02g022310 Solanum pennellii
Sp2g10880 Schrenkiella parvula
TAR487G0004 Trochodendron aralioides
TAR627G0809 Trochodendron aralioides
TAR629G0930 Trochodendron aralioides
THA.LOC104798409 Tarenaya hassleriana
THA.LOC104806140 Tarenaya hassleriana
THA.LOC104812872 Tarenaya hassleriana
Thecc.06G178400 Theobroma cacao
Thecc.07G100500 Theobroma cacao
Thhalv10001058m.g Eutrema salsugineum
TPR.G11762 Trifolium pratense
TPR.G27870 Trifolium pratense
TWI38G1079 Tripterygium wilfordii
TWI38G1764 Tripterygium wilfordii
TWI63G1023 Tripterygium wilfordii
unitig_22.g6752 Utricularia gibba
unitig_26.g9354 Utricularia gibba
vmacro15947 Vaccinium macrocarpon
Zm00001eb153500 Zea mays
Zm00001eb353100 Zea mays
Zm00001eb370860 Zea mays

User provided reference genes

Program Settings