Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_228.4870 Anthoceros agrestis
Actinidia30247 Actinidia chinensis
Actinidia38307 Actinidia chinensis
Actinidia39631 Actinidia chinensis
Ah.05g176340 Amaranthus hybridus
Ah.14g084790 Amaranthus hybridus
arahy.Tifrunner.gnm1.ann1.67NTJL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AIRX6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XGY8H1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YEH8SC Arachis hypogaea
ATR0680G243 Amborella trichopoda
ATR0681G122 Amborella trichopoda
Atru.chr5.440 Acer truncatum
Atru.chr7.1749 Acer truncatum
AUR62004309 Chenopodium quinoa
AUR62022760 Chenopodium quinoa
AUR62025280 Chenopodium quinoa
AUR62028283 Chenopodium quinoa
CAN.G52.10 Capsicum annuum
CAN.G78.16 Capsicum annuum
CANSAT56G1745 Cannabis sativa
Ca_07881_v3 Cicer arietinum L.
Ca_18397_v3 Cicer arietinum L.
Cc02_g37450 Coffea canephora
Cc06_g12560 Coffea canephora
CDE05G1221 Ceratophyllum demersum
CDE05G1977 Ceratophyllum demersum
Cfa004211 Carpinus fangiana
Ciclev10009188m.g Citrus clementina
Ciclev10021526m.g Citrus clementina
CiPaw.02G027500 Carya illinoinensis
CiPaw.03G202800 Carya illinoinensis
ClCG06G000040 Citrullus lanatus
COL.COLO4_12600 Corchorus olitorius
COL.COLO4_21226 Corchorus olitorius
Cpa.g.sc261.4 Carica papaya
Cpa.g.sc37.45 Carica papaya
CsaV3_1G041330 Cucumis sativus L.
CsaV3_6G005770 Cucumis sativus L.
CSS0000636 Camellia sinensis var. sinensis
CSS0004751 Camellia sinensis var. sinensis
CSS0026588 Camellia sinensis var. sinensis
CSS0032426 Camellia sinensis var. sinensis
Dinv25526 Davidia involucrata
Dinv42421 Davidia involucrata
Dinv43778 Davidia involucrata
Duzib133G1383 Durio zibethinus
Duzib138G1165 Durio zibethinus
Duzib168G1658 Durio zibethinus
Duzib268G1484 Durio zibethinus
ECA236G2211 Erigeron canadensis
ECA240G2858 Erigeron canadensis
EL10Ac1g00520 Beta vulgaris
EL10Ac8g19015 Beta vulgaris
Eucgr.C00779 Eucalyptus grandis
Eucgr.E00188 Eucalyptus grandis
FAN01G0987 Fragaria x ananassa
FAN03G0726 Fragaria x ananassa
FAN06G2249 Fragaria x ananassa
FAN06G3453 Fragaria x ananassa
FAN10G1796 Fragaria x ananassa
FAN10G2212 Fragaria x ananassa
FAN15G2253 Fragaria x ananassa
FAN19G1389 Fragaria x ananassa
FAN23G2743 Fragaria x ananassa
FAN24G2380 Fragaria x ananassa
FAN26G1641 Fragaria x ananassa
FAN26G2439 Fragaria x ananassa
FAN26G2501 Fragaria x ananassa
FAN28G0794 Fragaria x ananassa
FAN28G1002 Fragaria x ananassa
FvH4_1g09130 Fragaria vesca
FvH4_2g18850 Fragaria vesca
FvH4_7g13540 Fragaria vesca
Glyma.09G263200 Glycine max
Glyma.15G181300 Glycine max
Glyma.18G229000 Glycine max
Glyma.19G039400 Glycine max
Glyma.19G041000 Glycine max
Gohir.A05G035200 Gossypium hirsutum
Gohir.A11G086700 Gossypium hirsutum
Gohir.D05G036700 Gossypium hirsutum
Gohir.D11G090900 Gossypium hirsutum
Gorai.007G096900 Gossypium raimondii
Gorai.009G037200 Gossypium raimondii
GSVIVG01015033001 Vitis vinifera
GSVIVG01026819001 Vitis vinifera
HanXRQChr03g0060051 Helianthus annuus
HanXRQChr04g0121681 Helianthus annuus
Haze_15199 Corylus avellana
Haze_26048 Corylus avellana
Hma1.2p1_0001F.1_g001730 Hydrangea macrophylla
Hma1.2p1_0179F.1_g079270 Hydrangea macrophylla
Hund08851 Selenicereus undatus
Hund27310 Selenicereus undatus
Lalb_Chr01g0021091 Lupinus albus
Lalb_Chr11g0074061 Lupinus albus
Lj1g0020563 Lotus japonicus
Lj4C918T5 Lonicera japonica
Lj6g0008353 Lotus japonicus
Lj9A579T29 Lonicera japonica
Lsat_1_v5_gn_7_35340 Lactuca sativa
Lsat_1_v5_gn_7_5341 Lactuca sativa
Manes.01G260500 Manihot esculenta
Manes.03G043800 Manihot esculenta
Manes.16G091300 Manihot esculenta
Mapoly0052s0131 Marchantia polymorpha
MBI18_g45104_MAGBIO Magnolia biondii
MBI19_g18110_MAGBIO Magnolia biondii
MBI19_g29886_MAGBIO Magnolia biondii
MBI19_g29896_MAGBIO Magnolia biondii
MBI19_g44326_MAGBIO Magnolia biondii
MD01G1048500 Malus domestica
MD02G1096900 Malus domestica
MD15G1221700 Malus domestica
Medtr1g047620 Medicago truncatula
Medtr2g043370 Medicago truncatula
Medtr7g076600 Medicago truncatula
MELO3C015545.2 Cucumis melo
MELO3C022534.2 Cucumis melo
Migut.B01709 Erythranthe guttata
Migut.L01588 Erythranthe guttata
MSTRG.26491 Avicennia marina
MSTRG.4870 Avicennia marina
Nitab4.5_0001251g0050 Nicotiana tabacum
Nitab4.5_0001565g0090 Nicotiana tabacum
Nitab4.5_0006669g0010 Nicotiana tabacum
Nitab4.5_0007773g0030 Nicotiana tabacum
Nn1g01421 Nelumbo nucifera
Nn8g38560 Nelumbo nucifera
Oeu053293.1 Olea europaea
Oeu053295.1 Olea europaea
Oeu055337.3 Olea europaea
Oeu056346.1 Olea europaea
Os02g0640200 Oryza sativa ssp. japonica
Os12g0573000 Oryza sativa ssp. japonica
Peaxi162Scf00397g00522 Petunia axillaris
Peaxi162Scf00776g00113 Petunia axillaris
PGR042G2329 Punica granatum
PGR142G4000 Punica granatum
PGSC0003DMG400002390 Solanum tuberosum
PGSC0003DMG401000019 Solanum tuberosum
Phvul.008G069000 Phaseolus vulgaris
Phvul.009G224600 Phaseolus vulgaris
Potri.002G155700 Populus trichocarpa
Potri.006G138400 Populus trichocarpa
Potri.014G079500 Populus trichocarpa
Prupe.2G154400 Prunus persica
Prupe.2G159500 Prunus persica
Prupe.7G194000 Prunus persica
Psat1g135440 Pisum sativum
Psat3g111800 Pisum sativum
PSO104G0279 Papaver somniferum
PSO421G0180 Papaver somniferum
PSO478G4595 Papaver somniferum
PSO782G0809 Papaver somniferum
PSO782G1297 Papaver somniferum
PSO782G4791 Papaver somniferum
QL08p049983 Quercus lobata
QL11p001622 Quercus lobata
QL11p001636 Quercus lobata
RcHm_v2.0_Chr1g0353101 Rosa chinensis
RcHm_v2.0_Chr2g0095521 Rosa chinensis
Rhsim07G0019000 Rhododendron simsii
Sabra02G0123800 Salix brachista
Sabra06G0108200 Salix brachista
Sabra14G0057800 Salix brachista
SalBow5G1662 Salvia bowleyana
Sc02g0002140 Simmondsia chinensis
Sc08g0008990 Simmondsia chinensis
Sed0019831 Sechium edule
Sed0022298 Sechium edule
SEGI_12179 Sequoiadendron giganteum
SEGI_12213 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09538 Striga asiatica
SHI06917 Sapria himalayana
SMO244G0097 Selaginella moellendorffii
Solyc01g094180.4 Solanum lycopersicum
Solyc07g042280.4 Solanum lycopersicum
Sopen01g037980 Solanum pennellii
Sopen07g021910 Solanum pennellii
TAR468G0013 Trochodendron aralioides
TAR626G1143 Trochodendron aralioides
TAR629G1659 Trochodendron aralioides
Thecc.01G365400 Theobroma cacao
Thecc.09G072100 Theobroma cacao
TPR.G17601 Trifolium pratense
TPR.G20644 Trifolium pratense
TWI34G0487 Tripterygium wilfordii
TWI59G0087 Tripterygium wilfordii
unitig_22.g6807 Utricularia gibba
unitig_746.g26793 Utricularia gibba
vmacro13320 Vaccinium macrocarpon
vmacro17099 Vaccinium macrocarpon
VMungo1309G2248 Vigna mungo
VMungo1383G0671 Vigna mungo
VMungo1383G3405 Vigna mungo
Zm00001eb029380 Zea mays
Zm00001eb185770 Zea mays

User provided reference genes

Program Settings