Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p31750 Brassica napus
A05p02420 Brassica napus
Aa31LG1G23720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.415 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5028 Anthoceros agrestis
Actinidia23060 Actinidia chinensis
Ah.05g172200 Amaranthus hybridus
Ah.05g172210 Amaranthus hybridus
AL4G40010 Arabidopsis lyrata
Aqoxy1G02472 Aquilegia oxysepala
Aqoxy1G02473 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1IHI4J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81342Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R476QE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4K93Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WPHY5E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2WTDQ Arachis hypogaea
AT2G41705 Arabidopsis thaliana
ATR0807G044 Amborella trichopoda
ATR0807G213 Amborella trichopoda
ATR0850G001 Amborella trichopoda
Atru.chr13.1349 Acer truncatum
Atru.chr13.1350 Acer truncatum
Atru.chr13.1391 Acer truncatum
AUR62004716 Chenopodium quinoa
AUR62023631 Chenopodium quinoa
AUR62036406 Chenopodium quinoa
AUR62036452 Chenopodium quinoa
BcaB06g29198 Brassica carinata
BcaB06g29200 Brassica carinata
BcaC02g07297 Brassica carinata
BcaC02g12787 Brassica carinata
BcaNung06817 Brassica carinata
BolC4t21927H Brassica oleracea
BolC4t28415H Brassica oleracea
BraA04t18633Z Brassica rapa
BraA05t19236Z Brassica rapa
C04p02870 Brassica napus
C04p69170 Brassica napus
CAN.G134.189 Capsicum annuum
CAN.G734.1 Capsicum annuum
CANSAT56G1577 Cannabis sativa
CANSAT56G1611 Cannabis sativa
CARHR136800 Cardamine hirsuta
Carub.0004s2398 Capsella rubella
Ca_14032_v3 Cicer arietinum L.
Ca_14080_v3 Cicer arietinum L.
Ca_15210_v3 Cicer arietinum L.
CBR_g54098 Chara braunii
Cc06_g13570 Coffea canephora
CDE01G0736 Ceratophyllum demersum
Cfa015981 Carpinus fangiana
Ciclev10001037m.g Citrus clementina
CiPaw.05G226300 Carya illinoinensis
CiPaw.05G226400 Carya illinoinensis
ClCG03G009520 Citrullus lanatus
COL.COLO4_38335 Corchorus olitorius
Cpa.g.sc36.19 Carica papaya
Cre08.g367700 Chlamydomonas reinhardtii
CsaV3_5G023150 Cucumis sativus L.
CSS0043512 Camellia sinensis var. sinensis
CSS0044236 Camellia sinensis var. sinensis
CSS0048113 Camellia sinensis var. sinensis
DCAR_028636 Daucus carota
Dinv27352 Davidia involucrata
Duzib093G1044 Durio zibethinus
Duzib116G0521 Durio zibethinus
ECA246G0604 Erigeron canadensis
EL10Ac1g00015 Beta vulgaris
EL10Ac7g18243 Beta vulgaris
Eucgr.F04372 Eucalyptus grandis
FAN15G0165 Fragaria x ananassa
FAN15G0544 Fragaria x ananassa
FAN24G2254 Fragaria x ananassa
FAN24G2318 Fragaria x ananassa
FAN27G1027 Fragaria x ananassa
FvH4_2g13600 Fragaria vesca
FvH4_2g26430 Fragaria vesca
Glyma.04G252000 Glycine max
Glyma.04G252050 Glycine max
Glyma.06G110450 Glycine max
Glyma.06G110500 Glycine max
Gohir.A06G042200 Gossypium hirsutum
Gohir.D06G043200 Gossypium hirsutum
Gorai.010G048400 Gossypium raimondii
GSVIVG01008915001 Vitis vinifera
HanXRQChr17g0537311 Helianthus annuus
Haze_00493 Corylus avellana
Hma1.2p1_0009F.1_g006270 Hydrangea macrophylla
Hma1.2p1_0009F.1_g006283 Hydrangea macrophylla
Hma1.2p1_0009F.1_g006290 Hydrangea macrophylla
Hma1.2p1_0009F.1_g006300 Hydrangea macrophylla
Hma1.2p1_0009F.1_g006310 Hydrangea macrophylla
Hma1.2p1_0523F.1_g172050 Hydrangea macrophylla
HPP92_012116 Vanilla planifolia
HPP92_012126 Vanilla planifolia
Hund16834 Selenicereus undatus
Hund16838 Selenicereus undatus
Hund27042 Selenicereus undatus
Lalb_Chr11g0065761 Lupinus albus
Lalb_Chr23g0270901 Lupinus albus
Lalb_Chr23g0270911 Lupinus albus
Lalb_Chr23g0270941 Lupinus albus
Lj1g0010808 Lotus japonicus
Lj1g0027682 Lotus japonicus
Lj3g0027376 Lotus japonicus
Lj4A597G14 Lonicera japonica
Lj4A597T12 Lonicera japonica
Lsat_1_v5_gn_3_20261 Lactuca sativa
Manes.18G074712 Manihot esculenta
Mapoly0005s0025 Marchantia polymorpha
MD05G1028200 Malus domestica
MD05G1028300 Malus domestica
MD05G1028400 Malus domestica
MD08G1121700 Malus domestica
MD08G1168800 Malus domestica
MD08G1168900 Malus domestica
MD08G1170500 Malus domestica
MD08G1170900 Malus domestica
MD15G1354200 Malus domestica
MD15G1354300 Malus domestica
MD15G1354500 Malus domestica
MD16G1151600 Malus domestica
Medtr3g007470 Medicago truncatula
Medtr3g072830 Medicago truncatula
Medtr3g072840 Medicago truncatula
MELO3C003029.2 Cucumis melo
Migut.C01159 Erythranthe guttata
Migut.C01160 Erythranthe guttata
MSTRG.1469 Avicennia marina
MSTRG.1470 Avicennia marina
MSTRG.25396 Avicennia marina
Nitab4.5_0001273g0070 Nicotiana tabacum
Nitab4.5_0005357g0010 Nicotiana tabacum
Nitab4.5_0006276g0030 Nicotiana tabacum
Nn5g28144 Nelumbo nucifera
Oeu050892.2 Olea europaea
Os10g0567000 Oryza sativa ssp. japonica
Peaxi162Scf00402g00076 Petunia axillaris
PGSC0003DMG400012073 Solanum tuberosum
Phvul.003G010800 Phaseolus vulgaris
Phvul.009G122400 Phaseolus vulgaris
Potri.002G086800 Populus trichocarpa
Potri.005G174600 Populus trichocarpa
Pp3c27_680 Physcomitrium patens
Pp3c6_15270 Physcomitrium patens
Prupe.1G502900 Prunus persica
Psat5g133440 Pisum sativum
Psat5g229600 Pisum sativum
PSO384G4155 Papaver somniferum
QL04p060321 Quercus lobata
QL07p045468 Quercus lobata
RcHm_v2.0_Chr5g0059171 Rosa chinensis
RcHm_v2.0_Chr6g0275211 Rosa chinensis
RcHm_v2.0_Chr6g0295111 Rosa chinensis
Rhsim06G0106600 Rhododendron simsii
Rhsim10G0043500 Rhododendron simsii
RhsimUnG0120600 Rhododendron simsii
Sabra05G0131500 Salix brachista
Sabra05G0131700 Salix brachista
SalBow7G0329 Salvia bowleyana
SalBow7G2208 Salvia bowleyana
Sc01g0001400 Simmondsia chinensis
Sed0011022 Sechium edule
SEGI_02547 Sequoiadendron giganteum
SEGI_06352 Sequoiadendron giganteum
SEGI_10482 Sequoiadendron giganteum
SEGI_19823 Sequoiadendron giganteum
SEGI_25864 Sequoiadendron giganteum
SEGI_27083 Sequoiadendron giganteum
SEGI_33607 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10480 Striga asiatica
SGA_v2.0_scaffold52G18992 Striga asiatica
SMO140G0112 Selaginella moellendorffii
Solyc11g013120.2 Solanum lycopersicum
Sopen11g008180 Solanum pennellii
Sp4g23950 Schrenkiella parvula
TAR381G0480 Trochodendron aralioides
TAR381G1219 Trochodendron aralioides
TAR381G1345 Trochodendron aralioides
THA.LOC104800187 Tarenaya hassleriana
Thecc.08G120400 Theobroma cacao
Thhalv10016628m.g Eutrema salsugineum
TPR.G19881 Trifolium pratense
TPR.G25497 Trifolium pratense
TPR.G39483 Trifolium pratense
TWI12G1192 Tripterygium wilfordii
TWI56G0570 Tripterygium wilfordii
TWI74G0994 Tripterygium wilfordii
unitig_32.g11457 Utricularia gibba
unitig_748.g7679 Utricularia gibba
unitig_748.g7680 Utricularia gibba
vmacro05626 Vaccinium macrocarpon
vmacro12550 Vaccinium macrocarpon
vmacro12551 Vaccinium macrocarpon
vmacro20081 Vaccinium macrocarpon
VMungo1215G1715 Vigna mungo
VMungo1309G2531 Vigna mungo
Zm00001eb390680 Zea mays

User provided reference genes

Program Settings