Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p32170 Brassica napus
A01p33410 Brassica napus
A01p33430 Brassica napus
A02p16750 Brassica napus
A03p43080 Brassica napus
A07p31020 Brassica napus
Aa31LG7G7310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1527 Anthoceros agrestis
Actinidia01349 Actinidia chinensis
Actinidia15098 Actinidia chinensis
Actinidia27808 Actinidia chinensis
AL1G31870 Arabidopsis lyrata
AL1G37060 Arabidopsis lyrata
Aqoxy5G03760 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FFB06F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G4VR7T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3QT17 Arachis hypogaea
AT1G23280 Arabidopsis thaliana
ATR0824G091 Amborella trichopoda
ATR0996G003 Amborella trichopoda
Atru.chr2.1587 Acer truncatum
Atru.chr3.1559 Acer truncatum
Atru.chr3.1581 Acer truncatum
AUR62003555 Chenopodium quinoa
AUR62017869 Chenopodium quinoa
BcaB01g02833 Brassica carinata
BcaB01g03637 Brassica carinata
BcaB03g15550 Brassica carinata
BcaB04g17046 Brassica carinata
BcaB04g17979 Brassica carinata
BcaB04g17980 Brassica carinata
BcaB04g17981 Brassica carinata
BcaB05g23724 Brassica carinata
BcaB05g24600 Brassica carinata
BcaB07g33435 Brassica carinata
BcaC01g03409 Brassica carinata
BcaC02g10230 Brassica carinata
BcaC03g15214 Brassica carinata
BcaC08g45809 Brassica carinata
BcaC09g49228 Brassica carinata
BcaC09g49229 Brassica carinata
BolC1t04073H Brassica oleracea
BolC1t04074H Brassica oleracea
BolC1t04226H Brassica oleracea
BolC2t08844H Brassica oleracea
BolC3t17554H Brassica oleracea
BolC4t24676H Brassica oleracea
BolC6t38723H Brassica oleracea
BolC7t41374H Brassica oleracea
BraA01t03342Z Brassica rapa
BraA01t03464Z Brassica rapa
BraA02t06729Z Brassica rapa
BraA03t13450Z Brassica rapa
C01p41190 Brassica napus
C01p41200 Brassica napus
C01p42710 Brassica napus
C02p28010 Brassica napus
C03p52870 Brassica napus
C06p36020 Brassica napus
CAN.G158.25 Capsicum annuum
CANSAT64G0467 Cannabis sativa
CARHR023720 Cardamine hirsuta
Carub.0001s2287 Capsella rubella
Ca_20120_v3 Cicer arietinum L.
CBR_g32274 Chara braunii
Cc11_g15770 Coffea canephora
CDE02G2608 Ceratophyllum demersum
CDE05G1364 Ceratophyllum demersum
Cfa009213 Carpinus fangiana
Cfa010423 Carpinus fangiana
Cfa012129 Carpinus fangiana
Cfa026988 Carpinus fangiana
Ciclev10032237m.g Citrus clementina
CiPaw.05G159400 Carya illinoinensis
CiPaw.05G181800 Carya illinoinensis
ClCG07G015410 Citrullus lanatus
COL.COLO4_05559 Corchorus olitorius
Cpa.g.sc33.23 Carica papaya
Cre02.g145231 Chlamydomonas reinhardtii
CsaV3_4G003000 Cucumis sativus L.
CSS0036067 Camellia sinensis var. sinensis
DCAR_026512 Daucus carota
Dinv15231 Davidia involucrata
Dinv38208 Davidia involucrata
Duzib068G0444 Durio zibethinus
ECA233G3049 Erigeron canadensis
EL10Ac6g13812 Beta vulgaris
Eucgr.B00881 Eucalyptus grandis
Eucgr.B00992 Eucalyptus grandis
Eucgr.K00976 Eucalyptus grandis
Eucgr.K00985 Eucalyptus grandis
Eucgr.K01009 Eucalyptus grandis
FAN06G1621 Fragaria x ananassa
FAN06G3710 Fragaria x ananassa
FAN07G0682 Fragaria x ananassa
FAN10G4187 Fragaria x ananassa
FAN10G4221 Fragaria x ananassa
FAN17G2514 Fragaria x ananassa
FAN22G1899 Fragaria x ananassa
FvH4_4g25580 Fragaria vesca
FvH4_7g31100 Fragaria vesca
Glyma.06G286100 Glycine max
Glyma.12G119800 Glycine max
Gohir.A12G199400 Gossypium hirsutum
Gohir.D12G202200 Gossypium hirsutum
Gorai.008G217200 Gossypium raimondii
GSVIVG01007655001 Vitis vinifera
GSVIVG01021879001 Vitis vinifera
HanXRQChr06g0172831 Helianthus annuus
Haze_08919 Corylus avellana
Haze_12250 Corylus avellana
Haze_18771 Corylus avellana
Haze_19277 Corylus avellana
Haze_26253 Corylus avellana
Hma1.2p1_3343F.1_g335440 Hydrangea macrophylla
HPP92_014432 Vanilla planifolia
Hund06028 Selenicereus undatus
Lalb_Chr04g0254851 Lupinus albus
Lalb_Chr10g0099861 Lupinus albus
Lj1A759T42 Lonicera japonica
Lj1g0018398 Lotus japonicus
Lsat_1_v5_gn_5_166341 Lactuca sativa
Lsat_1_v5_gn_8_152261 Lactuca sativa
Manes.13G024200 Manihot esculenta
Mapoly0061s0104 Marchantia polymorpha
MCO01G280 Micromonas commoda
MD03G1198200 Malus domestica
MD11G1214400 Malus domestica
Medtr1g048860 Medicago truncatula
Medtr2g103560 Medicago truncatula
Medtr4g079190 Medicago truncatula
MELO3C017744.2 Cucumis melo
Migut.E00204 Erythranthe guttata
Nitab4.5_0000979g0020 Nicotiana tabacum
Nitab4.5_0000979g0040 Nicotiana tabacum
Nitab4.5_0001565g0060 Nicotiana tabacum
Nitab4.5_0009109g0040 Nicotiana tabacum
Nitab4.5_0016963g0010 Nicotiana tabacum
Nn2g13933 Nelumbo nucifera
Nn8g39875 Nelumbo nucifera
Nn8g40815 Nelumbo nucifera
Oeu036040.1 Olea europaea
Oeu041425.1 Olea europaea
Os07g0270900 Oryza sativa ssp. japonica
Os07g0271600 Oryza sativa ssp. japonica
Peaxi162Scf00128g00219 Petunia axillaris
PGR102G0689 Punica granatum
PGSC0003DMG400032131 Solanum tuberosum
Phvul.010G035100 Phaseolus vulgaris
Phvul.011G000100 Phaseolus vulgaris
Potri.012G085300 Populus trichocarpa
Potri.015G083700 Populus trichocarpa
Pp3c1_36430 Physcomitrium patens
Pp3c2_4220 Physcomitrium patens
PRCOL_00004566 Prasinoderma coloniale
Prupe.1G244800 Prunus persica
Prupe.8G011700 Prunus persica
Prupe.8G016700 Prunus persica
Psat7g167080 Pisum sativum
PSO017G4826 Papaver somniferum
PSO017G5618 Papaver somniferum
PSO478G1628 Papaver somniferum
QL03p058012 Quercus lobata
QL03p061482 Quercus lobata
QL03p061510 Quercus lobata
RcHm_v2.0_Chr4g0433011 Rosa chinensis
RcHm_v2.0_Chr7g0190541 Rosa chinensis
Rhsim02G0001300 Rhododendron simsii
Rhsim06G0078600 Rhododendron simsii
Rhsim12G0110100 Rhododendron simsii
Sabra12G0061400 Salix brachista
Sabra15G0107000 Salix brachista
Sc14g0008740 Simmondsia chinensis
Sed0010066 Sechium edule
Sed0026406 Sechium edule
SEGI_01875 Sequoiadendron giganteum
SEGI_07600 Sequoiadendron giganteum
SEGI_38458 Sequoiadendron giganteum
SMO331G0073 Selaginella moellendorffii
Solyc01g005810.3 Solanum lycopersicum
Sopen01g001810 Solanum pennellii
Sp5g25830 Schrenkiella parvula
SpUn0343_0020 Schrenkiella parvula
TAR374G1409 Trochodendron aralioides
TAR622G0502 Trochodendron aralioides
THA.LOC104822989 Tarenaya hassleriana
Thecc.03G025100 Theobroma cacao
Thhalv10008312m.g Eutrema salsugineum
TPR.G28314 Trifolium pratense
TPR.G37166 Trifolium pratense
TWI23G0208 Tripterygium wilfordii
TWI39G0719 Tripterygium wilfordii
TWI60G0838 Tripterygium wilfordii
unitig_21.g20608 Utricularia gibba
vmacro16194 Vaccinium macrocarpon
vmacro17128 Vaccinium macrocarpon
vmacro17129 Vaccinium macrocarpon
VMungo1127G0899 Vigna mungo
Zm00001eb143030 Zea mays
Zm00001eb364260 Zea mays

User provided reference genes

Program Settings