Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p30580 Brassica napus
A07p37970 Brassica napus
Aa31LG4G8810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1499 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis
Actinidia06762 Actinidia chinensis
Actinidia15626 Actinidia chinensis
Actinidia22371 Actinidia chinensis
Actinidia22448 Actinidia chinensis
Ah.09g232700 Amaranthus hybridus
AL2G31400 Arabidopsis lyrata
Aqoxy2G01386 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea
AT1G71820 Arabidopsis thaliana
ATR0815G027 Amborella trichopoda
ATR0824G022 Amborella trichopoda
Atru.chr13.1894 Acer truncatum
Atru.chr13.1960 Acer truncatum
Atru.chr6.1390 Acer truncatum
Atru.chr7.57 Acer truncatum
AUR62027528 Chenopodium quinoa
AUR62027529 Chenopodium quinoa
AUR62030227 Chenopodium quinoa
BcaB03g15619 Brassica carinata
BcaB04g20817 Brassica carinata
BcaC08g45755 Brassica carinata
BcaC08g46613 Brassica carinata
BolC6t38641H Brassica oleracea
BolC6t38645H Brassica oleracea
BolC6t38648H Brassica oleracea
BolC6t39641H Brassica oleracea
BraA07t30693Z Brassica rapa
BraA07t31362Z Brassica rapa
C05p58670 Brassica napus
C06p35360 Brassica napus
C06p45890 Brassica napus
CAN.G1010.15 Capsicum annuum
CANSAT25G1859 Cannabis sativa
CANSAT56G3946 Cannabis sativa
CARHR290940 Cardamine hirsuta
CARHR290950 Cardamine hirsuta
CARHR290960 Cardamine hirsuta
Carub.0002s1858 Capsella rubella
Ca_19958_v3 Cicer arietinum L.
Ca_19959_v3 Cicer arietinum L.
Ca_19960_v3 Cicer arietinum L.
CBR_g30506 Chara braunii
Cc00_g30250 Coffea canephora
Cc10_g06190 Coffea canephora
CDE04G0884 Ceratophyllum demersum
CDE04G2480 Ceratophyllum demersum
CDE06G0862 Ceratophyllum demersum
CDE06G1435 Ceratophyllum demersum
CDE06G1802 Ceratophyllum demersum
Cfa000383 Carpinus fangiana
Cfa018227 Carpinus fangiana
Cfa025323 Carpinus fangiana
Ciclev10000376m.g Citrus clementina
Ciclev10000395m.g Citrus clementina
CiPaw.15G007400 Carya illinoinensis
CiPaw.15G007500 Carya illinoinensis
ClCG08G008060 Citrullus lanatus
ClCG08G008720 Citrullus lanatus
COL.COLO4_12104 Corchorus olitorius
Cpa.g.sc66.124 Carica papaya
Cpa.g.sc66.125 Carica papaya
Cpa.g.sc66.127 Carica papaya
Cpa.g.sc88.64 Carica papaya
Cre17.g744847 Chlamydomonas reinhardtii
CsaV3_6G004750 Cucumis sativus L.
CSS0008854 Camellia sinensis var. sinensis
CSS0045751 Camellia sinensis var. sinensis
DCAR_009600 Daucus carota
DCAR_013169 Daucus carota
Duzib187G1187 Durio zibethinus
ECA246G4467 Erigeron canadensis
EL10Ac8g19742 Beta vulgaris
Eucgr.F04156 Eucalyptus grandis
FAN02G2135 Fragaria x ananassa
FAN05G2825 Fragaria x ananassa
FAN14G5243 Fragaria x ananassa
FvH4_6g24280 Fragaria vesca
Glyma.01G140600 Glycine max
Glyma.03G026100 Glycine max
Glyma.03G026300 Glycine max
Glyma.03G026400 Glycine max
Glyma.03G026900 Glycine max
Gohir.A10G068000 Gossypium hirsutum
Gohir.D10G107600 Gossypium hirsutum
Gorai.011G117900 Gossypium raimondii
GSVIVG01022846001 Vitis vinifera
GSVIVG01022862001 Vitis vinifera
GSVIVG01038535001 Vitis vinifera
HanXRQChr01g0002061 Helianthus annuus
HanXRQChr10g0278751 Helianthus annuus
HanXRQChr10g0278771 Helianthus annuus
Haze_13387 Corylus avellana
Haze_13390 Corylus avellana
Haze_13391 Corylus avellana
Haze_13393 Corylus avellana
Haze_13395 Corylus avellana
Haze_17875 Corylus avellana
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla
Hma1.2p1_1261F.1_g271140 Hydrangea macrophylla
HPP92_002340 Vanilla planifolia
Hund17515 Selenicereus undatus
Lalb_Chr01g0009891 Lupinus albus
Lalb_Chr19g0129871 Lupinus albus
Lj4C710G5 Lonicera japonica
Lj4C710T4 Lonicera japonica
Lj4g0005231 Lotus japonicus
Lsat_1_v5_gn_6_100921 Lactuca sativa
Manes.02G187400 Manihot esculenta
Manes.18G097100 Manihot esculenta
Mapoly0001s0359 Marchantia polymorpha
MBI01_g21241_MAGBIO Magnolia biondii
MBI02_g35947_MAGBIO Magnolia biondii
MBI02_g35948_MAGBIO Magnolia biondii
MBI02_g44124_MAGBIO Magnolia biondii
MBI05_g36581_MAGBIO Magnolia biondii
MBI05_g36592_MAGBIO Magnolia biondii
MBI05_g43692_MAGBIO Magnolia biondii
MCO11G044 Micromonas commoda
MD14G1071700 Malus domestica
Medtr4g024570 Medicago truncatula
MELO3C019945.2 Cucumis melo
MELO3C030259.2 Cucumis melo
Migut.C00145 Erythranthe guttata
Migut.C00172 Erythranthe guttata
Migut.C00173 Erythranthe guttata
Migut.I00210 Erythranthe guttata
MSTRG.963 Avicennia marina
Nitab4.5_0001307g0060 Nicotiana tabacum
Nitab4.5_0002608g0090 Nicotiana tabacum
Nn8g40471 Nelumbo nucifera
Oeu027630.1 Olea europaea
Oeu042182.1 Olea europaea
Os02g0749500 Oryza sativa ssp. japonica
Peaxi162Scf00226g00925 Petunia axillaris
PGR102G1634 Punica granatum
Phvul.010G082700 Phaseolus vulgaris
Potri.013G117400 Populus trichocarpa
Potri.019G088100 Populus trichocarpa
Pp3c8_3920 Physcomitrium patens
Prupe.4G277400 Prunus persica
Psat4g195800 Pisum sativum
Psat7g231160 Pisum sativum
PSO210G3754 Papaver somniferum
PSO210G4421 Papaver somniferum
PSO447G0346 Papaver somniferum
QL02p034918 Quercus lobata
QL02p034947 Quercus lobata
QL05p025121 Quercus lobata
QL05p025142 Quercus lobata
QL05p046655 Quercus lobata
RcHm_v2.0_Chr1g0335041 Rosa chinensis
RcHm_v2.0_Chr1g0335051 Rosa chinensis
RcHm_v2.0_Chr1g0335061 Rosa chinensis
RcHm_v2.0_Chr1g0335071 Rosa chinensis
RcHm_v2.0_Chr2g0113821 Rosa chinensis
RcHm_v2.0_Chr3g0482841 Rosa chinensis
Rhsim05G0166700 Rhododendron simsii
Sabra13G0099500 Salix brachista
Sabra19G0098400 Salix brachista
Sabra19G0101900 Salix brachista
Sc02g0003480 Simmondsia chinensis
Sc02g0003530 Simmondsia chinensis
Sed0005269 Sechium edule
SEGI_07888 Sequoiadendron giganteum
SEGI_12719 Sequoiadendron giganteum
SEGI_15136 Sequoiadendron giganteum
SEGI_21874 Sequoiadendron giganteum
SEGI_29399 Sequoiadendron giganteum
SEGI_39176 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10292 Striga asiatica
SGA_v2.0_scaffold48G18027 Striga asiatica
SHI09125 Sapria himalayana
SHI09126 Sapria himalayana
SMO298G0019 Selaginella moellendorffii
Solyc04g072290.3 Solanum lycopersicum
Sopen04g028480 Solanum pennellii
Sp5g26850 Schrenkiella parvula
SpUn0020_0120 Schrenkiella parvula
TAR625G1262 Trochodendron aralioides
THA.LOC104800101 Tarenaya hassleriana
Thecc.01G140700 Theobroma cacao
Thhalv10018180m.g Eutrema salsugineum
TPR.G31331 Trifolium pratense
TWI32G0245 Tripterygium wilfordii
TWI32G0430 Tripterygium wilfordii
unitig_46.g18008 Utricularia gibba
vmacro03706 Vaccinium macrocarpon
vmacro11080 Vaccinium macrocarpon
vmacro11081 Vaccinium macrocarpon
VMungo0331G0815 Vigna mungo
VMungo0331G1041 Vigna mungo
Zm00001eb194380 Zea mays
Zm00001eb254950 Zea mays

User provided reference genes

Program Settings