Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11990 Brassica napus
A08p26430 Brassica napus
A09p38650 Brassica napus
Aa31LG7G9910 Aethionema arabicum
Actinidia04435 Actinidia chinensis
Actinidia08059 Actinidia chinensis
Actinidia09637 Actinidia chinensis
Actinidia30634 Actinidia chinensis
Actinidia30869 Actinidia chinensis
Ah.03g136010 Amaranthus hybridus
AL1G40690 Arabidopsis lyrata
Aqoxy3G01580 Aquilegia oxysepala
Aqoxy5G03322 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R9UC9A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V484X6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4TZMI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XFVS70 Arachis hypogaea
AT1G27290 Arabidopsis thaliana
ATR0561G224 Amborella trichopoda
Atru.chr11.2346 Acer truncatum
AUR62017773 Chenopodium quinoa
BcaB03g12071 Brassica carinata
BcaB03g14004 Brassica carinata
BcaB06g27003 Brassica carinata
BcaB07g33882 Brassica carinata
BcaC01g01624 Brassica carinata
BcaC01g01625 Brassica carinata
BcaC05g26544 Brassica carinata
BolC3t19656H Brassica oleracea
BolC7t42298H Brassica oleracea
BraA07t28984Z Brassica rapa
BraA08t34595Z Brassica rapa
BraA09t39371Z Brassica rapa
C03p73650 Brassica napus
C05p25990 Brassica napus
C07p17920 Brassica napus
CAN.G7.14 Capsicum annuum
CANSAT01G2188 Cannabis sativa
CANSAT64G1003 Cannabis sativa
CARHR026860 Cardamine hirsuta
Carub.0001s2582 Capsella rubella
Ca_16446_v3 Cicer arietinum L.
Ca_18018_v3 Cicer arietinum L.
Cc07_g00970 Coffea canephora
Cc11_g17090 Coffea canephora
CDE02G2290 Ceratophyllum demersum
Cfa007215 Carpinus fangiana
Ciclev10017602m.g Citrus clementina
Ciclev10032970m.g Citrus clementina
CiPaw.03G057000 Carya illinoinensis
CiPaw.05G107800 Carya illinoinensis
CiPaw.06G104400 Carya illinoinensis
ClCG06G002160 Citrullus lanatus
ClCG07G015190 Citrullus lanatus
Cpa.g.sc171.2 Carica papaya
Cpa.g.sc43.80 Carica papaya
CsaV3_4G002780 Cucumis sativus L.
CsaV3_6G008230 Cucumis sativus L.
CSS0019501 Camellia sinensis var. sinensis
CSS0043963 Camellia sinensis var. sinensis
DCAR_024672 Daucus carota
Dinv11681 Davidia involucrata
Dinv17578 Davidia involucrata
Duzib248G1492 Durio zibethinus
Duzib251G0418 Durio zibethinus
Duzib268G0386 Durio zibethinus
EL10Ac6g13525 Beta vulgaris
Eucgr.H04620 Eucalyptus grandis
Eucgr.I01636 Eucalyptus grandis
FAN07G2322 Fragaria x ananassa
FAN12G4113 Fragaria x ananassa
FAN17G2596 Fragaria x ananassa
FvH4_4g23540 Fragaria vesca
Glyma.05G148600 Glycine max
Glyma.11G252200 Glycine max
Glyma.18G004900 Glycine max
Glyma.19G093400 Glycine max
Gohir.A01G154140 Gossypium hirsutum
Gohir.A03G125000 Gossypium hirsutum
Gohir.A05G310300 Gossypium hirsutum
Gohir.A12G149400 Gossypium hirsutum
Gohir.D01G146200 Gossypium hirsutum
Gohir.D02G147400 Gossypium hirsutum
Gohir.D05G311100 Gossypium hirsutum
Gohir.D12G153300 Gossypium hirsutum
Gorai.002G181900 Gossypium raimondii
Gorai.005G165100 Gossypium raimondii
Gorai.008G165800 Gossypium raimondii
Gorai.009G332100 Gossypium raimondii
HanXRQChr05g0128721 Helianthus annuus
HanXRQChr06g0174711 Helianthus annuus
HanXRQChr07g0198161 Helianthus annuus
Haze_12439 Corylus avellana
Haze_14888 Corylus avellana
Hma1.2p1_0065F.1_g035230 Hydrangea macrophylla
Hma1.2p1_0275F.1_g110610 Hydrangea macrophylla
Hma1.2p1_1057F.1_g252730 Hydrangea macrophylla
HPP92_023377 Vanilla planifolia
HPP92_025259 Vanilla planifolia
Hund25475 Selenicereus undatus
Lalb_Chr07g0187041 Lupinus albus
Lalb_Chr12g0206031 Lupinus albus
Lalb_Chr23g0278191 Lupinus albus
Lj1g0017862 Lotus japonicus
Lj4g0014081 Lotus japonicus
Lj6g0011251 Lotus japonicus
Lsat_1_v5_gn_2_93281 Lactuca sativa
Lsat_1_v5_gn_4_781 Lactuca sativa
Manes.12G009300 Manihot esculenta
Manes.13G009900 Manihot esculenta
MBI07_g11273_MAGBIO Magnolia biondii
MBI11_g22683_MAGBIO Magnolia biondii
MD13G1121400 Malus domestica
MD16G1121700 Malus domestica
Medtr3g084990 Medicago truncatula
Medtr5g078400 Medicago truncatula
Medtr7g028805 Medicago truncatula
Medtr8g097040 Medicago truncatula
MELO3C017764.2 Cucumis melo
MELO3C022314.2 Cucumis melo
Migut.E00007 Erythranthe guttata
Migut.K00956 Erythranthe guttata
Migut.K01474 Erythranthe guttata
MSTRG.492 Avicennia marina
MSTRG.8015 Avicennia marina
Nitab4.5_0000067g0190 Nicotiana tabacum
Nitab4.5_0000340g0030 Nicotiana tabacum
Nitab4.5_0005872g0010 Nicotiana tabacum
Nitab4.5_0012747g0020 Nicotiana tabacum
Nn3g16424 Nelumbo nucifera
Nn4g22281 Nelumbo nucifera
Oeu004464.1 Olea europaea
Oeu049146.3 Olea europaea
Oeu056671.1 Olea europaea
Os01g0923000 Oryza sativa ssp. japonica
Os09g0507400 Oryza sativa ssp. japonica
Peaxi162Scf00518g00025 Petunia axillaris
PGR102G1973 Punica granatum
PGR119G0689 Punica granatum
PGSC0003DMG400013209 Solanum tuberosum
PGSC0003DMG401021901 Solanum tuberosum
Phvul.001G263300 Phaseolus vulgaris
Phvul.L003346 Phaseolus vulgaris
Potri.001G058100 Populus trichocarpa
Potri.003G170300 Populus trichocarpa
Prupe.1G223700 Prunus persica
Psat5g098080 Pisum sativum
Psat7g077520 Pisum sativum
PSO017G5034 Papaver somniferum
PSO017G5305 Papaver somniferum
PSO478G1430 Papaver somniferum
PSO478G5262 Papaver somniferum
QL03p052131 Quercus lobata
RcHm_v2.0_Chr4g0429941 Rosa chinensis
Rhsim08G0042100 Rhododendron simsii
Rhsim12G0024500 Rhododendron simsii
Rhsim12G0093300 Rhododendron simsii
Sabra01G0041900 Salix brachista
SalBow2G0507 Salvia bowleyana
SalBow4G0150 Salvia bowleyana
SalBow4G1936 Salvia bowleyana
SalBow7G0626 Salvia bowleyana
SalBow8G1362 Salvia bowleyana
Sc11g0000380 Simmondsia chinensis
Sed0008687 Sechium edule
Sed0009671 Sechium edule
Sed0026789 Sechium edule
SEGI_10840 Sequoiadendron giganteum
SEGI_34361 Sequoiadendron giganteum
SGA_v2.0_scaffold253G45188 Striga asiatica
SGA_v2.0_scaffold391G50621 Striga asiatica
SGA_v2.0_scaffold87G27173 Striga asiatica
SGA_v2.0_scaffold95G28802 Striga asiatica
Solyc05g015710.3 Solanum lycopersicum
Sopen04g016940 Solanum pennellii
Sopen05g011160 Solanum pennellii
TAR374G1678 Trochodendron aralioides
TAR629G2062 Trochodendron aralioides
TAR636G3177 Trochodendron aralioides
THA.LOC104807144 Tarenaya hassleriana
THA.LOC104807496 Tarenaya hassleriana
THA.LOC104809188 Tarenaya hassleriana
THA.LOC104822793 Tarenaya hassleriana
THA.LOC104825492 Tarenaya hassleriana
Thecc.02G204700 Theobroma cacao
Thecc.04G039200 Theobroma cacao
Thhalv10009048m.g Eutrema salsugineum
TPR.G17100 Trifolium pratense
TPR.G17778 Trifolium pratense
TPR.G29062 Trifolium pratense
TWI18G0155 Tripterygium wilfordii
TWI36G1005 Tripterygium wilfordii
unitig_22.g6403 Utricularia gibba
unitig_26.g10403 Utricularia gibba
unitig_749.g13308 Utricularia gibba
unitig_8.g3133 Utricularia gibba
VMungo0251G0083 Vigna mungo
Zm00001eb102460 Zea mays
Zm00001eb141250 Zea mays
Zm00001eb364310 Zea mays

User provided reference genes

Program Settings