Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p42230 Brassica napus
A06p06180 Brassica napus
A06p37010 Brassica napus
A09p05660 Brassica napus
Aa31LG11G9870 Aethionema arabicum
Aa31LG1G5630 Aethionema arabicum
Aa31LG5G16210 Aethionema arabicum
Actinidia01664 Actinidia chinensis
Actinidia16911 Actinidia chinensis
Ah.06g190650 Amaranthus hybridus
AL1G19990 Arabidopsis lyrata
AL3G16570 Arabidopsis lyrata
AL6G38640 Arabidopsis lyrata
Aqoxy2G02528 Aquilegia oxysepala
Aqoxy5G02790 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36CNLM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4B7523 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7ZMX5M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B9BAGZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D23GS1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LCTE14 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.US2PL9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WSUD3I Arachis hypogaea
AT1G09470 Arabidopsis thaliana
AT1G09483 Arabidopsis thaliana
AT3G05830 Arabidopsis thaliana
AT5G26770 Arabidopsis thaliana
ATR0796G311 Amborella trichopoda
Atru.chr12.1551 Acer truncatum
AUR62000468 Chenopodium quinoa
AUR62006809 Chenopodium quinoa
BcaB01g00664 Brassica carinata
BcaB04g19713 Brassica carinata
BcaC04g23636 Brassica carinata
BcaC05g29778 Brassica carinata
BcaC05g30086 Brassica carinata
BcaC09g50034 Brassica carinata
BcaNung03675 Brassica carinata
BcaNung03912 Brassica carinata
BolC1t05662H Brassica oleracea
BolC4t26373H Brassica oleracea
BolC4t26374H Brassica oleracea
BolC5t29502H Brassica oleracea
BolC5t34803H Brassica oleracea
BolC7t44681H Brassica oleracea
BolC9t53547H Brassica oleracea
BraA05t22941Z Brassica rapa
BraA06t23830Z Brassica rapa
BraA06t26626Z Brassica rapa
BraA09t36208Z Brassica rapa
C05p07470 Brassica napus
C05p61450 Brassica napus
C07p41480 Brassica napus
C09p06270 Brassica napus
CAN.G1248.24 Capsicum annuum
CANSAT54G2189 Cannabis sativa
CARHR009430 Cardamine hirsuta
CARHR080290 Cardamine hirsuta
CARHR186800 Cardamine hirsuta
Carub.0001s0882 Capsella rubella
Carub.0003s0519 Capsella rubella
Carub.0006s2442 Capsella rubella
Ca_10195_v3 Cicer arietinum L.
Cc02_g35780 Coffea canephora
CDE08G0751 Ceratophyllum demersum
Ciclev10012076m.g Citrus clementina
CiPaw.07G035400 Carya illinoinensis
CiPaw.08G150800 Carya illinoinensis
ClCG02G014670 Citrullus lanatus
COL.COLO4_05512 Corchorus olitorius
Cpa.g.sc48.220 Carica papaya
CsaV3_2G007300 Cucumis sativus L.
CSS0037128 Camellia sinensis var. sinensis
DCAR_025305 Daucus carota
DCAR_029287 Daucus carota
Dinv24506 Davidia involucrata
Dinv30940 Davidia involucrata
Dinv30941 Davidia involucrata
Duzib128G1566 Durio zibethinus
Duzib177G0752 Durio zibethinus
ECA236G3082 Erigeron canadensis
EL10Ac4g09549 Beta vulgaris
Eucgr.B01817 Eucalyptus grandis
Eucgr.H01317 Eucalyptus grandis
FAN05G5683 Fragaria x ananassa
FAN09G0161 Fragaria x ananassa
FAN14G3569 Fragaria x ananassa
FvH4_6g08410 Fragaria vesca
Glyma.10G144000 Glycine max
Glyma.20G092900 Glycine max
Gohir.A13G113600 Gossypium hirsutum
Gohir.D13G116700 Gossypium hirsutum
Gorai.013G131200 Gossypium raimondii
GSVIVG01028212001 Vitis vinifera
GSVIVG01031318001 Vitis vinifera
HanXRQChr03g0088701 Helianthus annuus
Haze_03996 Corylus avellana
Hma1.2p1_0052F.1_g030415 Hydrangea macrophylla
Hma1.2p1_3304F.1_g335080 Hydrangea macrophylla
Hma1.2p1_3841F.1_g337660 Hydrangea macrophylla
HPP92_026058 Vanilla planifolia
Hund07273 Selenicereus undatus
Hund07277 Selenicereus undatus
Hund21837 Selenicereus undatus
Lalb_Chr04g0260311 Lupinus albus
Lalb_Chr06g0167331 Lupinus albus
Lalb_Chr21g0310081 Lupinus albus
Lj5A319T47 Lonicera japonica
Lj5g0005042 Lotus japonicus
Lj9C230G11 Lonicera japonica
Lju99C6G3 Lonicera japonica
Lsat_1_v5_gn_9_77100 Lactuca sativa
Manes.08G107900 Manihot esculenta
Manes.09G180600 Manihot esculenta
Mapoly0116s0017 Marchantia polymorpha
MBI06_g33528_MAGBIO Magnolia biondii
MBI18_g09639_MAGBIO Magnolia biondii
MBI19_g32732_MAGBIO Magnolia biondii
MD04G1187100 Malus domestica
MD12G1200500 Malus domestica
Medtr1g484830 Medicago truncatula
Medtr7g012670 Medicago truncatula
MELO3C004154.2 Cucumis melo
Migut.B00877 Erythranthe guttata
Migut.N00969 Erythranthe guttata
MSTRG.16423 Avicennia marina
MSTRG.27914 Avicennia marina
MSTRG.5167 Avicennia marina
Nitab4.5_0001931g0010 Nicotiana tabacum
Nitab4.5_0014791g0020 Nicotiana tabacum
Nn3g21904 Nelumbo nucifera
Nn4g25397 Nelumbo nucifera
Oeu000100.1 Olea europaea
Oeu029183.1 Olea europaea
Oeu036644.1 Olea europaea
Oeu061921.1 Olea europaea
Os01g0292700 Oryza sativa ssp. japonica
Os05g0135900 Oryza sativa ssp. japonica
Peaxi162Scf00357g00017 Petunia axillaris
PGR031G1608 Punica granatum
PGR083G2508 Punica granatum
PGR119G1398 Punica granatum
PGSC0003DMG400018247 Solanum tuberosum
Phvul.007G204500 Phaseolus vulgaris
Potri.005G003600 Populus trichocarpa
Potri.013G003400 Populus trichocarpa
Prupe.6G305600 Prunus persica
Psat6g155400 Pisum sativum
PSO210G2054 Papaver somniferum
PSO357G0133 Papaver somniferum
PSO761G0645 Papaver somniferum
QL03p010236 Quercus lobata
QL03p010471 Quercus lobata
RcHm_v2.0_Chr3g0458381 Rosa chinensis
Rhsim05G0121800 Rhododendron simsii
Rhsim11G0101700 Rhododendron simsii
Rhsim11G0101900 Rhododendron simsii
Sabra05G0000900 Salix brachista
Sabra05G0015000 Salix brachista
Sabra13G0002900 Salix brachista
Sabra17G0096700 Salix brachista
SalBow1G0001 Salvia bowleyana
Sc16g0009380 Simmondsia chinensis
Sed0017632 Sechium edule
Sed0023403 Sechium edule
SEGI_01307 Sequoiadendron giganteum
SEGI_23842 Sequoiadendron giganteum
SGA_v2.0_scaffold117G32404 Striga asiatica
SGA_v2.0_scaffold279G46784 Striga asiatica
Solyc01g101130.3 Solanum lycopersicum
Sopen01g044580 Solanum pennellii
Sp1g08080 Schrenkiella parvula
Sp2g21210 Schrenkiella parvula
Sp3g04690 Schrenkiella parvula
TAR362G0077 Trochodendron aralioides
TAR365G0256 Trochodendron aralioides
TAR365G0905 Trochodendron aralioides
TAR636G2549 Trochodendron aralioides
THA.LOC104816843 Tarenaya hassleriana
THA.LOC104818749 Tarenaya hassleriana
THA.LOC104821745 Tarenaya hassleriana
Thecc.05G329000 Theobroma cacao
Thhalv10004552m.g Eutrema salsugineum
Thhalv10008143m.g Eutrema salsugineum
Thhalv10021934m.g Eutrema salsugineum
TPR.G2623 Trifolium pratense
TWI56G0029 Tripterygium wilfordii
unitig_22.g5801 Utricularia gibba
unitig_26.g8997 Utricularia gibba
unitig_26.g8998 Utricularia gibba
vmacro01603 Vaccinium macrocarpon
vmacro19768 Vaccinium macrocarpon
VMungo0720G0630 Vigna mungo
Zm00001eb052040 Zea mays
Zm00001eb075980 Zea mays
Zm00001eb080250 Zea mays
Zm00001eb113430 Zea mays
Zm00001eb129850 Zea mays
Zm00001eb354610 Zea mays
Zm00001eb417390 Zea mays

User provided reference genes

Program Settings