Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03190 Brassica napus
A01p10930 Brassica napus
Aa31LG6G1580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2786 Anthoceros agrestis
Actinidia00757 Actinidia chinensis
Actinidia06364 Actinidia chinensis
Actinidia09137 Actinidia chinensis
Ah.05g167170 Amaranthus hybridus
AL3G51990 Arabidopsis lyrata
AL7G15790 Arabidopsis lyrata
AL7G35270 Arabidopsis lyrata
AL7G35280 Arabidopsis lyrata
Aqoxy2G03536 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.015YF3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1Z7RSE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.555Q75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6C167N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.98W4LT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A1R0CF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AGQ12H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LK2XUL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LKD0H4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LTR966 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6YQ7G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3GRJ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZY1N1V Arachis hypogaea
AT4G18900 Arabidopsis thaliana
AT4G18905 Arabidopsis thaliana
AT4G35370 Arabidopsis thaliana
ATR0693G254 Amborella trichopoda
Atru.chr1.1031 Acer truncatum
Atru.chr1.1032 Acer truncatum
Atru.chr3.672 Acer truncatum
Atru.chr3.717 Acer truncatum
AUR62033117 Chenopodium quinoa
AUR62039160 Chenopodium quinoa
BcaB04g18506 Brassica carinata
BcaB04g18507 Brassica carinata
BcaC01g00577 Brassica carinata
BcaC01g00578 Brassica carinata
BcaC01g00579 Brassica carinata
BcaC06g30604 Brassica carinata
BcaC09g51456 Brassica carinata
BcaNung00601 Brassica carinata
BcaNung00602 Brassica carinata
BcaNung02686 Brassica carinata
BcaNung04868 Brassica carinata
BolC1t00343H Brassica oleracea
BolC1t01269H Brassica oleracea
BolC3t20426H Brassica oleracea
BolC3t20427H Brassica oleracea
BolC7t45512H Brassica oleracea
BraA01t00304Z Brassica rapa
BraA01t01039Z Brassica rapa
BraA03t14247Z Brassica rapa
BraA08t33397Z Brassica rapa
BraA08t33398Z Brassica rapa
C01p03540 Brassica napus
C01p12940 Brassica napus
C03p81560 Brassica napus
C03p81570 Brassica napus
C07p50090 Brassica napus
CANSAT11G1046 Cannabis sativa
CARHR225780 Cardamine hirsuta
CARHR243680 Cardamine hirsuta
Carub.0003s3263 Capsella rubella
Carub.0007s2229 Capsella rubella
Carub.0007s2230 Capsella rubella
Ca_06470_v3 Cicer arietinum L.
Ca_20890_v3 Cicer arietinum L.
Ca_21295_v3 Cicer arietinum L.
CBR_g8571 Chara braunii
Cc04_g14810 Coffea canephora
Cc04_g14820 Coffea canephora
CDE02G2548 Ceratophyllum demersum
CDE02G4528 Ceratophyllum demersum
CDE09G0427 Ceratophyllum demersum
CDE09G0650 Ceratophyllum demersum
Cfa013259 Carpinus fangiana
Cfa021699 Carpinus fangiana
Ciclev10004806m.g Citrus clementina
CiPaw.07G051500 Carya illinoinensis
CiPaw.08G138300 Carya illinoinensis
ClCG04G004000 Citrullus lanatus
ClCG06G014970 Citrullus lanatus
COL.COLO4_35734 Corchorus olitorius
Cpa.g.sc89.74 Carica papaya
Cre01.g035000 Chlamydomonas reinhardtii
CsaV3_2G007870 Cucumis sativus L.
CSS0031696 Camellia sinensis var. sinensis
CSS0031848 Camellia sinensis var. sinensis
CSS0037270 Camellia sinensis var. sinensis
CSS0045191 Camellia sinensis var. sinensis
CSS0047421 Camellia sinensis var. sinensis
DCAR_023249 Daucus carota
Dinv32930 Davidia involucrata
Dinv34758 Davidia involucrata
Dinv40394 Davidia involucrata
Duzib106G0895 Durio zibethinus
Duzib264G0139 Durio zibethinus
ECA238G0366 Erigeron canadensis
ECA240G1009 Erigeron canadensis
EL10As7g23803 Beta vulgaris
Eucgr.H02854 Eucalyptus grandis
FAN04G1939 Fragaria x ananassa
FAN08G1135 Fragaria x ananassa
FAN18G4171 Fragaria x ananassa
FAN19G0435 Fragaria x ananassa
FAN23G2718 Fragaria x ananassa
FAN26G2328 Fragaria x ananassa
FAN28G1735 Fragaria x ananassa
FAN28G2580 Fragaria x ananassa
FvH4_1g12600 Fragaria vesca
FvH4_5g33300 Fragaria vesca
Glyma.02G307200 Glycine max
Glyma.14G005900 Glycine max
Gohir.A05G385400 Gossypium hirsutum
Gohir.D04G022600 Gossypium hirsutum
Gorai.012G034400 Gossypium raimondii
GSVIVG01018880001 Vitis vinifera
HanXRQChr03g0083001 Helianthus annuus
HanXRQChr13g0411651 Helianthus annuus
Haze_21717 Corylus avellana
Haze_21718 Corylus avellana
Hma1.2p1_0083F.1_g042700 Hydrangea macrophylla
Hma1.2p1_0822F.1_g224510 Hydrangea macrophylla
HPP92_003102 Vanilla planifolia
Hund18693 Selenicereus undatus
Lalb_Chr17g0349241 Lupinus albus
Lj9A413G54 Lonicera japonica
LjContig00081g0028006 Lotus japonicus
Lsat_1_v5_gn_5_59220 Lactuca sativa
Manes.01G139900 Manihot esculenta
Manes.12G078200 Manihot esculenta
Mapoly0004s0245 Marchantia polymorpha
MBI02_g23715_MAGBIO Magnolia biondii
MBI16_g36844_MAGBIO Magnolia biondii
MCO01G177 Micromonas commoda
MD12G1093200 Malus domestica
MD14G1085200 Malus domestica
Medtr5g097870 Medicago truncatula
MELO3C004100.2 Cucumis melo
MELO3C005151.2 Cucumis melo
MELO3C027228.2 Cucumis melo
Migut.H00806 Erythranthe guttata
Nitab4.5_0000401g0230 Nicotiana tabacum
Nitab4.5_0001652g0060 Nicotiana tabacum
Nitab4.5_0003101g0060 Nicotiana tabacum
Nitab4.5_0004347g0060 Nicotiana tabacum
Oeu028071.1 Olea europaea
Oeu047246.2 Olea europaea
Os01g0924300 Oryza sativa ssp. japonica
Peaxi162Scf00047g00219 Petunia axillaris
PGR083G0802 Punica granatum
PGSC0003DMG400023568 Solanum tuberosum
PGSC0003DMG401005959 Solanum tuberosum
PGSC0003DMG402005959 Solanum tuberosum
Phvul.008G287000 Phaseolus vulgaris
Potri.007G019601 Populus trichocarpa
Potri.007G019833 Populus trichocarpa
Pp3c4_20160 Physcomitrium patens
PRCOL_00001431 Prasinoderma coloniale
Prupe.7G160700 Prunus persica
Psat2g004000 Pisum sativum
Psat2g004040 Pisum sativum
PSO761G0245 Papaver somniferum
PSO832G1536 Papaver somniferum
QL06p035199 Quercus lobata
RcHm_v2.0_Chr2g0100561 Rosa chinensis
Rhsim05G0047900 Rhododendron simsii
Rhsim13G0025400 Rhododendron simsii
RhsimUnG0142200 Rhododendron simsii
Sabra07G0016700 Salix brachista
SalBow6G4756 Salvia bowleyana
Sc09g0007320 Simmondsia chinensis
Sed0024756 Sechium edule
SEGI_38491 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25931 Striga asiatica
SGA_v2.0_scaffold81G26011 Striga asiatica
SMO361G0182 Selaginella moellendorffii
SMO361G0432 Selaginella moellendorffii
Solyc04g005330.3 Solanum lycopersicum
Sopen04g001310 Solanum pennellii
Sp7g17610 Schrenkiella parvula
Sp7g33160 Schrenkiella parvula
TAR376G0111 Trochodendron aralioides
TAR628G0767 Trochodendron aralioides
THA.LOC104821304 Tarenaya hassleriana
Thecc.01G131300 Theobroma cacao
Thecc.09G077300 Theobroma cacao
Thhalv10024971m.g Eutrema salsugineum
Thhalv10027098m.g Eutrema salsugineum
TPR.G15067 Trifolium pratense
TWI73G0135 Tripterygium wilfordii
unitig_52.g17243 Utricularia gibba
unitig_578.g15850 Utricularia gibba
vmacro02576 Vaccinium macrocarpon
VMungo0540G1027 Vigna mungo
VMungo0540G1594 Vigna mungo
VMungo0647G2029 Vigna mungo
Zm00001eb142980 Zea mays

User provided reference genes

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