Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00440 Brassica napus
A09p12770 Brassica napus
A09p58950 Brassica napus
A09p58970 Brassica napus
Aa31LG8G17270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1346 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1347 Anthoceros agrestis
Actinidia03017 Actinidia chinensis
Actinidia05277 Actinidia chinensis
Actinidia38239 Actinidia chinensis
Ah.08g211990 Amaranthus hybridus
AL3G47810 Arabidopsis lyrata
Aqoxy4G03149 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TFIN41 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9C9EC Arachis hypogaea
AT2G20280 Arabidopsis thaliana
ATR0594G173 Amborella trichopoda
Atru.chr12.617 Acer truncatum
Atru.chr2.559 Acer truncatum
Atru.chr8.2539 Acer truncatum
Atru.chr8.2540 Acer truncatum
AUR62040529 Chenopodium quinoa
AUR62042915 Chenopodium quinoa
BcaB03g16817 Brassica carinata
BcaB08g34902 Brassica carinata
BcaC06g36708 Brassica carinata
BcaC07g41222 Brassica carinata
BcaNung04098 Brassica carinata
BolC7t40525H Brassica oleracea
BolC8t51787H Brassica oleracea
BolC9t54420H Brassica oleracea
BraA07t27835Z Brassica rapa
BraA09t36921Z Brassica rapa
BraA09t41282Z Brassica rapa
BraA09t41283Z Brassica rapa
C07p00860 Brassica napus
C08p42270 Brassica napus
C09p15140 Brassica napus
CAN.G350.44 Capsicum annuum
CANSAT56G1215 Cannabis sativa
CARHR110770 Cardamine hirsuta
Carub.0003s3461 Capsella rubella
Ca_02310_v3 Cicer arietinum L.
CBR_g30214 Chara braunii
Cc06_g03410 Coffea canephora
CDE02G0377 Ceratophyllum demersum
CDE09G0715 Ceratophyllum demersum
Cfa017491 Carpinus fangiana
Cfa022263 Carpinus fangiana
Ciclev10012046m.g Citrus clementina
Ciclev10031903m.g Citrus clementina
CiPaw.01G277700 Carya illinoinensis
CiPaw.02G177300 Carya illinoinensis
CiPaw.09G181800 Carya illinoinensis
ClCG02G013800 Citrullus lanatus
COL.COLO4_23774 Corchorus olitorius
COL.COLO4_27101 Corchorus olitorius
Cpa.g.sc1.277 Carica papaya
Cpa.g.sc2216.1 Carica papaya
Cre01.g014050 Chlamydomonas reinhardtii
CsaV3_5G006370 Cucumis sativus L.
CSS0037704 Camellia sinensis var. sinensis
CSS0040010 Camellia sinensis var. sinensis
DCAR_009274 Daucus carota
DCAR_019147 Daucus carota
Dinv31373 Davidia involucrata
Dinv35697 Davidia involucrata
Dinv37240 Davidia involucrata
Duzib093G0661 Durio zibethinus
Duzib114G0225 Durio zibethinus
Duzib128G0237 Durio zibethinus
Duzib128G1992 Durio zibethinus
ECA232G1617 Erigeron canadensis
ECA233G1391 Erigeron canadensis
EL10Ac7g17330 Beta vulgaris
Eucgr.A01194 Eucalyptus grandis
Eucgr.G02789 Eucalyptus grandis
FAN01G1405 Fragaria x ananassa
FAN03G2813 Fragaria x ananassa
FAN06G0926 Fragaria x ananassa
FAN06G2168 Fragaria x ananassa
FAN06G2221 Fragaria x ananassa
FAN06G3791 Fragaria x ananassa
FAN09G2519 Fragaria x ananassa
FAN10G3299 Fragaria x ananassa
FAN10G3966 Fragaria x ananassa
FAN14G5170 Fragaria x ananassa
FvH4_6g15130 Fragaria vesca
FvH4_7g04780 Fragaria vesca
FvH4_7g20460 Fragaria vesca
Glyma.03G177100 Glycine max
Glyma.10G048400 Glycine max
Glyma.13G136200 Glycine max
Glyma.19G177767 Glycine max
Glyma.19G177833 Glycine max
Gohir.A01G217900 Gossypium hirsutum
Gohir.A05G343800 Gossypium hirsutum
Gohir.D01G206800 Gossypium hirsutum
Gohir.D04G082200 Gossypium hirsutum
Gorai.002G251700 Gossypium raimondii
Gorai.012G092900 Gossypium raimondii
GSVIVG01016357001 Vitis vinifera
HanXRQChr03g0062601 Helianthus annuus
HanXRQChr05g0152201 Helianthus annuus
HanXRQChr08g0219711 Helianthus annuus
HanXRQChr12g0370391 Helianthus annuus
HanXRQChr13g0395701 Helianthus annuus
HanXRQChr15g0496801 Helianthus annuus
HanXRQChr17g0559121 Helianthus annuus
Haze_16950 Corylus avellana
Haze_20530 Corylus avellana
Haze_20669 Corylus avellana
Haze_26460 Corylus avellana
Hma1.2p1_0111F.1_g053750 Hydrangea macrophylla
Hma1.2p1_0348F.1_g131920 Hydrangea macrophylla
HPP92_001029 Vanilla planifolia
Hund20140 Selenicereus undatus
Lalb_Chr02g0153591 Lupinus albus
Lalb_Chr06g0171311 Lupinus albus
Lalb_Chr21g0314591 Lupinus albus
Lalb_Chr25g0288441 Lupinus albus
Lj3C977T6 Lonicera japonica
Lj5g0004676 Lotus japonicus
Lj8A94G44 Lonicera japonica
Lsat_1_v5_gn_8_20961 Lactuca sativa
Lsat_1_v5_gn_9_66560 Lactuca sativa
Manes.08G001802 Manihot esculenta
Manes.08G001804 Manihot esculenta
Manes.09G070600 Manihot esculenta
Mapoly0100s0024 Marchantia polymorpha
MBI14_g24892_MAGBIO Magnolia biondii
MCO09G666 Micromonas commoda
MD01G1113600 Malus domestica
MD04G1114100 Malus domestica
MD07G1181600 Malus domestica
MD12G1126300 Malus domestica
MD12G1126400 Malus domestica
MD15G1093000 Malus domestica
Medtr1g067020 Medicago truncatula
Medtr6g078970 Medicago truncatula
MELO3C011721.2 Cucumis melo
Migut.J00405 Erythranthe guttata
Migut.L01654 Erythranthe guttata
MSTRG.26735 Avicennia marina
Nitab4.5_0000848g0130 Nicotiana tabacum
Nitab4.5_0003820g0050 Nicotiana tabacum
Nitab4.5_0006316g0020 Nicotiana tabacum
Nitab4.5_0016592g0010 Nicotiana tabacum
Nn2g10616 Nelumbo nucifera
Oeu018422.1 Olea europaea
Oeu029424.1 Olea europaea
Oeu060080.1 Olea europaea
Os01g0834700 Oryza sativa ssp. japonica
Os03g0285133 Oryza sativa ssp. japonica
Peaxi162Scf00005g05117 Petunia axillaris
PGR004G2225 Punica granatum
PGR142G1653 Punica granatum
PGSC0003DMG400027902 Solanum tuberosum
Phvul.007G162750 Phaseolus vulgaris
Potri.006G132800 Populus trichocarpa
Potri.008G045600 Populus trichocarpa
Potri.016G084100 Populus trichocarpa
Pp3c25_2690 Physcomitrium patens
Pp3c6_18260 Physcomitrium patens
Prupe.2G220500 Prunus persica
Prupe.6G243000 Prunus persica
Psat0ss6317g0120 Pisum sativum
PSO339G1296 Papaver somniferum
PSO384G0969 Papaver somniferum
QL07p045546 Quercus lobata
QL08p057203 Quercus lobata
RcHm_v2.0_Chr1g0364371 Rosa chinensis
RcHm_v2.0_Chr3g0468431 Rosa chinensis
Rhsim03G0141300 Rhododendron simsii
Sabra06G0104300 Salix brachista
Sabra08G0031900 Salix brachista
SalBow3G4124 Salvia bowleyana
SalBow4G2948 Salvia bowleyana
Sc01g0003650 Simmondsia chinensis
Sed0009252 Sechium edule
SEGI_02269 Sequoiadendron giganteum
SGA_v2.0_scaffold284G47021 Striga asiatica
SGA_v2.0_scaffold35G14175 Striga asiatica
SGA_v2.0_scaffold94G28659 Striga asiatica
SMO358G0089 Selaginella moellendorffii
Solyc09g007230.3 Solanum lycopersicum
Sopen09g002100 Solanum pennellii
Sp3g33510 Schrenkiella parvula
TAR633G2643 Trochodendron aralioides
TAR636G0680 Trochodendron aralioides
TAR636G1733 Trochodendron aralioides
TAR636G1965 Trochodendron aralioides
THA.LOC104799363 Tarenaya hassleriana
Thecc.05G052300 Theobroma cacao
Thecc.10G065500 Theobroma cacao
Thhalv10002021m.g Eutrema salsugineum
TPR.G35662 Trifolium pratense
TWI15G1024 Tripterygium wilfordii
unitig_8.g4664 Utricularia gibba
vmacro07093 Vaccinium macrocarpon
VMungo0720G1327 Vigna mungo
Zm00001eb148820 Zea mays

User provided reference genes

Program Settings