Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27720 Brassica napus
A06p27570 Brassica napus
Aa31LG3G6040 Aethionema arabicum
Aa31LG4G16900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1505 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1511 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2053 Anthoceros agrestis
Actinidia08838 Actinidia chinensis
Ah.03g149110 Amaranthus hybridus
Ah.04g158570 Amaranthus hybridus
Ah.08g218440 Amaranthus hybridus
Ah.10g024880 Amaranthus hybridus
Ah.15g095510 Amaranthus hybridus
AL5G27720 Arabidopsis lyrata
AL8G24260 Arabidopsis lyrata
Aqoxy3G01291 Aquilegia oxysepala
Aqoxy5G03667 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2HQS5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3LIJD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FAZ0NX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MBC64I Arachis hypogaea
AT3G48330 Arabidopsis thaliana
AT5G50240 Arabidopsis thaliana
ATR0199G037 Amborella trichopoda
Atru.chr9.1811 Acer truncatum
AUR62001231 Chenopodium quinoa
AUR62022089 Chenopodium quinoa
BcaB01g02907 Brassica carinata
BcaB02g10658 Brassica carinata
BcaC01g02333 Brassica carinata
BcaC01g04824 Brassica carinata
BolC3t15666H Brassica oleracea
BolC3t18920H Brassica oleracea
BraA03t11984Z Brassica rapa
BraA06t25697Z Brassica rapa
C03p33450 Brassica napus
C03p66480 Brassica napus
CAN.G126.92 Capsicum annuum
CARHR157070 Cardamine hirsuta
CARHR258360 Cardamine hirsuta
CARHR258370 Cardamine hirsuta
Carub.0005s1450 Capsella rubella
Carub.0008s1024 Capsella rubella
Ca_16114_v3 Cicer arietinum L.
Ca_19430_v3 Cicer arietinum L.
Ca_30675_v3 Cicer arietinum L.
CBR_g18585 Chara braunii
CBR_g40121 Chara braunii
Cc04_g10920 Coffea canephora
CDE02G2727 Ceratophyllum demersum
CDE09G0515 Ceratophyllum demersum
CDE09G0765 Ceratophyllum demersum
Cfa009517 Carpinus fangiana
Cfa010506 Carpinus fangiana
Cfa022150 Carpinus fangiana
Ciclev10021331m.g Citrus clementina
CiPaw.11G015000 Carya illinoinensis
CiPaw.12G033200 Carya illinoinensis
ClCG06G017520 Citrullus lanatus
COL.COLO4_03350 Corchorus olitorius
Cpa.g.sc4.12 Carica papaya
Cre03.g162100 Chlamydomonas reinhardtii
Cre03.g195350 Chlamydomonas reinhardtii
Cre07.g342000 Chlamydomonas reinhardtii
Cre12.g557100 Chlamydomonas reinhardtii
CsaV3_1G000930 Cucumis sativus L.
CSS0037129 Camellia sinensis var. sinensis
DCAR_026195 Daucus carota
Dinv11128 Davidia involucrata
Dinv38502 Davidia involucrata
Duzib084G0608 Durio zibethinus
ECA232G0550 Erigeron canadensis
EL10Ac7g18027 Beta vulgaris
Eucgr.B00176 Eucalyptus grandis
Eucgr.K02777 Eucalyptus grandis
FAN04G1819 Fragaria x ananassa
FAN08G3611 Fragaria x ananassa
FAN13G0421 Fragaria x ananassa
FAN18G4485 Fragaria x ananassa
FvH4_5g06670 Fragaria vesca
Glyma.04G190200 Glycine max
Glyma.05G043300 Glycine max
Glyma.06G175300 Glycine max
Glyma.17G125800 Glycine max
Gohir.A03G075600 Gossypium hirsutum
Gohir.A07G055200 Gossypium hirsutum
Gohir.A12G186400 Gossypium hirsutum
Gohir.D03G102300 Gossypium hirsutum
Gohir.D07G059500 Gossypium hirsutum
Gohir.D12G189400 Gossypium hirsutum
Gorai.001G063000 Gossypium raimondii
Gorai.003G107800 Gossypium raimondii
Gorai.008G203200 Gossypium raimondii
GSVIVG01007595001 Vitis vinifera
HanXRQChr05g0145511 Helianthus annuus
HanXRQChr09g0272631 Helianthus annuus
Haze_07627 Corylus avellana
Haze_07628 Corylus avellana
Haze_27380 Corylus avellana
HPP92_003739 Vanilla planifolia
HPP92_020210 Vanilla planifolia
HPP92_020227 Vanilla planifolia
Hund05609 Selenicereus undatus
Hund18508 Selenicereus undatus
Lalb_Chr11g0069891 Lupinus albus
Lalb_Chr12g0201981 Lupinus albus
Lj1g0015101 Lotus japonicus
Lj4g0017032 Lotus japonicus
Lj5A133T98 Lonicera japonica
Lj9A440T61 Lonicera japonica
Lsat_1_v5_gn_4_78581 Lactuca sativa
Manes.06G112100 Manihot esculenta
Manes.14G057500 Manihot esculenta
Mapoly0191s0007 Marchantia polymorpha
MBI10_g33730_MAGBIO Magnolia biondii
MCO16G146 Micromonas commoda
MD06G1161900 Malus domestica
MD14G1167700 Malus domestica
Medtr3g075470 Medicago truncatula
Medtr4g104440 Medicago truncatula
MELO3C026245.2 Cucumis melo
Migut.D02030 Erythranthe guttata
Migut.O00193 Erythranthe guttata
Migut.O00194 Erythranthe guttata
Migut.O00195 Erythranthe guttata
Migut.O00196 Erythranthe guttata
Migut.O00197 Erythranthe guttata
MSTRG.11512 Avicennia marina
MSTRG.4342 Avicennia marina
MSTRG.9699 Avicennia marina
Nitab4.5_0000025g0210 Nicotiana tabacum
Nitab4.5_0000510g0140 Nicotiana tabacum
Nitab4.5_0000774g0080 Nicotiana tabacum
Nitab4.5_0003542g0050 Nicotiana tabacum
Nn3g16649 Nelumbo nucifera
Nn4g22535 Nelumbo nucifera
Oeu023464.1 Olea europaea
Oeu045493.1 Olea europaea
Os04g0481400 Oryza sativa ssp. japonica
Os08g0557000 Oryza sativa ssp. japonica
Peaxi162Scf00089g00112 Petunia axillaris
Peaxi162Scf00801g00734 Petunia axillaris
PGR044G1545 Punica granatum
PGR083G0429 Punica granatum
PGSC0003DMG400015226 Solanum tuberosum
Phvul.003G206800 Phaseolus vulgaris
Phvul.008G174600 Phaseolus vulgaris
Phvul.009G171400 Phaseolus vulgaris
Potri.012G090300 Populus trichocarpa
Potri.015G086600 Populus trichocarpa
Pp3c11_23520 Physcomitrium patens
Pp3c12_14550 Physcomitrium patens
Pp3c3_30500 Physcomitrium patens
Pp3c4_2040 Physcomitrium patens
Pp3c5_5200 Physcomitrium patens
Pp3c6_22210 Physcomitrium patens
Pp3c6_26460 Physcomitrium patens
Pp3c8_3810 Physcomitrium patens
PRCOL_00005768 Prasinoderma coloniale
PRCOL_00007239 Prasinoderma coloniale
Prupe.5G162200 Prunus persica
Psat4g062080 Pisum sativum
Psat5g118080 Pisum sativum
PSO017G7265 Papaver somniferum
QL10p005988 Quercus lobata
RcHm_v2.0_Chr7g0191991 Rosa chinensis
Rhsim12G0169800 Rhododendron simsii
Sabra12G0065100 Salix brachista
Sabra15G0109400 Salix brachista
SalBow5G1694 Salvia bowleyana
SalBow5G2064 Salvia bowleyana
SalBow5G5484 Salvia bowleyana
SalBow6G6880 Salvia bowleyana
Sc22g0004240 Simmondsia chinensis
Sed0024477 Sechium edule
Sed0025533 Sechium edule
SEGI_41306 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10781 Striga asiatica
SGA_v2.0_scaffold7G04168 Striga asiatica
SHI17403 Sapria himalayana
SMO116G0180 Selaginella moellendorffii
SMO137G0292 Selaginella moellendorffii
Solyc03g111830.4 Solanum lycopersicum
Sopen03g030930 Solanum pennellii
Sp5g13720 Schrenkiella parvula
Sp6g12340 Schrenkiella parvula
TAR622G0655 Trochodendron aralioides
TAR629G1150 Trochodendron aralioides
THA.LOC104809275 Tarenaya hassleriana
THA.LOC104818210 Tarenaya hassleriana
Thecc.03G118200 Theobroma cacao
Thhalv10010684m.g Eutrema salsugineum
Thhalv10014311m.g Eutrema salsugineum
TPR.G24762 Trifolium pratense
TPR.G37513 Trifolium pratense
TWI23G0769 Tripterygium wilfordii
TWI39G0503 Tripterygium wilfordii
vmacro16685 Vaccinium macrocarpon
VMungo1215G1394 Vigna mungo
VMungo1309G0086 Vigna mungo
Zm00001eb079410 Zea mays
Zm00001eb176270 Zea mays

User provided reference genes

Program Settings