Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12870 Brassica napus
A08p15100 Brassica napus
A08p33620 Brassica napus
Aa31LG1G3630 Aethionema arabicum
Aa31LG6G3580 Aethionema arabicum
Actinidia01929 Actinidia chinensis
Actinidia05589 Actinidia chinensis
Ah.09g235980 Amaranthus hybridus
Ah.14g088980 Amaranthus hybridus
AL1G22230 Arabidopsis lyrata
AL7G32450 Arabidopsis lyrata
Aqoxy2G00778 Aquilegia oxysepala
Aqoxy4G01375 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B2KB4I Arachis hypogaea
AT1G11200 Arabidopsis thaliana
AT4G21570 Arabidopsis thaliana
ATR0693G258 Amborella trichopoda
Atru.chr10.1991 Acer truncatum
Atru.chr2.2832 Acer truncatum
AUR62014737 Chenopodium quinoa
AUR62016917 Chenopodium quinoa
BcaB02g11467 Brassica carinata
BcaB03g11689 Brassica carinata
BcaB03g13269 Brassica carinata
BcaB06g27621 Brassica carinata
BcaC01g00692 Brassica carinata
BcaC07g38644 Brassica carinata
BcaNung02781 Brassica carinata
BcaNung02783 Brassica carinata
BolC1t01503H Brassica oleracea
BolC3t20606H Brassica oleracea
BraA01t01231Z Brassica rapa
BraA08t33490Z Brassica rapa
BraA08t35276Z Brassica rapa
C01p15490 Brassica napus
C03p83250 Brassica napus
C08p14160 Brassica napus
CAN.G1181.13 Capsicum annuum
CAN.G162.99 Capsicum annuum
CANSAT56G1016 Cannabis sativa
CARHR011430 Cardamine hirsuta
CARHR228250 Cardamine hirsuta
Carub.0001s1079 Capsella rubella
Carub.0007s1984 Capsella rubella
Ca_00269_v3 Cicer arietinum L.
CBR_g30131 Chara braunii
Cc02_g12580 Coffea canephora
Cc05_g12600 Coffea canephora
Cfa000366 Carpinus fangiana
Ciclev10009103m.g Citrus clementina
Ciclev10016111m.g Citrus clementina
CiPaw.09G159000 Carya illinoinensis
ClCG03G005580 Citrullus lanatus
ClCG11G018430 Citrullus lanatus
COL.COLO4_31561 Corchorus olitorius
Cpa.g.sc27.109 Carica papaya
CsaV3_1G011840 Cucumis sativus L.
CsaV3_3G044390 Cucumis sativus L.
CSS0048997 Camellia sinensis var. sinensis
DCAR_009982 Daucus carota
DCAR_022485 Daucus carota
DCAR_024891 Daucus carota
Dinv40508 Davidia involucrata
Duzib192G0669 Durio zibethinus
Duzib235G0980 Durio zibethinus
ECA236G0034 Erigeron canadensis
ECA236G1645 Erigeron canadensis
ECA236G1699 Erigeron canadensis
ECA236G2452 Erigeron canadensis
ECA236G4207 Erigeron canadensis
ECA240G2906 Erigeron canadensis
ECA247G0613 Erigeron canadensis
ECA247G2015 Erigeron canadensis
ECA247G2973 Erigeron canadensis
ECA248G0927 Erigeron canadensis
ECA248G1057 Erigeron canadensis
EL10Ac8g20625 Beta vulgaris
Eucgr.E03424 Eucalyptus grandis
Eucgr.F01084 Eucalyptus grandis
FAN21G1328 Fragaria x ananassa
FAN25G0967 Fragaria x ananassa
FvH4_3g04231 Fragaria vesca
FvH4_3g04232 Fragaria vesca
FvH4_3g04241 Fragaria vesca
FvH4_3g20851 Fragaria vesca
Glyma.06G253700 Glycine max
Glyma.12G147700 Glycine max
Glyma.13G245500 Glycine max
Glyma.15G068200 Glycine max
Glyma.17G156651 Glycine max
Gohir.A05G164500 Gossypium hirsutum
Gohir.A10G020000 Gossypium hirsutum
Gohir.D05G167500 Gossypium hirsutum
Gohir.D10G020800 Gossypium hirsutum
Gorai.009G172600 Gossypium raimondii
Gorai.011G021900 Gossypium raimondii
GSVIVG01006710001 Vitis vinifera
GSVIVG01014421001 Vitis vinifera
HanXRQChr01g0003801 Helianthus annuus
HanXRQChr03g0075921 Helianthus annuus
HanXRQChr11g0330881 Helianthus annuus
Haze_06558 Corylus avellana
Hma1.2p1_0144F.1_g064850 Hydrangea macrophylla
Hma1.2p1_1003F.1_g246720 Hydrangea macrophylla
HPP92_000924 Vanilla planifolia
Lalb_Chr03g0030411 Lupinus albus
Lalb_Chr19g0134461 Lupinus albus
Lalb_Chr20g0122231 Lupinus albus
Lj1A1212T53 Lonicera japonica
Lj1C852T4 Lonicera japonica
Lj3g0005235 Lotus japonicus
Lj6g0007412 Lotus japonicus
Lsat_1_v5_gn_1_124781 Lactuca sativa
Lsat_1_v5_gn_7_106380 Lactuca sativa
Manes.16G021900 Manihot esculenta
Manes.17G040100 Manihot esculenta
Mapoly0105s0057 Marchantia polymorpha
MBI18_g11112_MAGBIO Magnolia biondii
MD03G1219900 Malus domestica
MD05G1324000 Malus domestica
MD10G1301700 Malus domestica
Medtr2g012360 Medicago truncatula
Medtr4g050765 Medicago truncatula
MELO3C000251.2 Cucumis melo
MELO3C001323.2 Cucumis melo
MELO3C002561.2 Cucumis melo
MELO3C018200.2 Cucumis melo
MELO3C030440.2 Cucumis melo
Migut.M00871 Erythranthe guttata
Migut.M01199 Erythranthe guttata
MSTRG.15924 Avicennia marina
MSTRG.6850 Avicennia marina
Nitab4.5_0000297g0050 Nicotiana tabacum
Nitab4.5_0001170g0210 Nicotiana tabacum
Nitab4.5_0002565g0050 Nicotiana tabacum
Nitab4.5_0003676g0100 Nicotiana tabacum
Nn1g03927 Nelumbo nucifera
Nn1g03929 Nelumbo nucifera
Nn1g06733 Nelumbo nucifera
Oeu008027.1 Olea europaea
Oeu038224.1 Olea europaea
Oeu038225.1 Olea europaea
Oeu055677.1 Olea europaea
Os07g0506000 Oryza sativa ssp. japonica
Peaxi162Scf00527g00617 Petunia axillaris
Peaxi162Scf01111g00016 Petunia axillaris
PGR042G1885 Punica granatum
PGSC0003DMG400019288 Solanum tuberosum
PGSC0003DMG400022417 Solanum tuberosum
Phvul.006G191300 Phaseolus vulgaris
Phvul.011G154600 Phaseolus vulgaris
Potri.001G405700 Populus trichocarpa
Potri.004G035900 Populus trichocarpa
Potri.011G044200 Populus trichocarpa
Pp3c25_2510 Physcomitrium patens
Prupe.4G038200 Prunus persica
Prupe.4G188900 Prunus persica
Prupe.I000400 Prunus persica
Psat1g207960 Pisum sativum
PSO210G5484 Papaver somniferum
PSO421G0720 Papaver somniferum
PSO541G3724 Papaver somniferum
PSO675G7281 Papaver somniferum
PSO832G0036 Papaver somniferum
QL05p081723 Quercus lobata
QL08p018713 Quercus lobata
QL93p2023_0098 Quercus lobata
RcHm_v2.0_Chr5g0006631 Rosa chinensis
RcHm_v2.0_Chr5g0035181 Rosa chinensis
Rhsim04G0018300 Rhododendron simsii
Rhsim13G0174200 Rhododendron simsii
Sabra04G0021900 Salix brachista
Sabra11G0030700 Salix brachista
Sc05g0008020 Simmondsia chinensis
Sed0018963 Sechium edule
Sed0023957 Sechium edule
SEGI_18056 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31968 Striga asiatica
SGA_v2.0_scaffold73G24311 Striga asiatica
SMO147G0112 Selaginella moellendorffii
Solyc02g078960.4 Solanum lycopersicum
Solyc07g063520.3 Solanum lycopersicum
Sopen02g023770 Solanum pennellii
Sopen07g031700 Solanum pennellii
Sp1g09870 Schrenkiella parvula
Sp7g19700 Schrenkiella parvula
TAR626G1825 Trochodendron aralioides
THA.LOC104809552 Tarenaya hassleriana
THA.LOC104812956 Tarenaya hassleriana
Thecc.06G197000 Theobroma cacao
Thhalv10008344m.g Eutrema salsugineum
Thhalv10025871m.g Eutrema salsugineum
TWI38G0124 Tripterygium wilfordii
TWI38G1758 Tripterygium wilfordii
TWI39G0129 Tripterygium wilfordii
unitig_0.g2257 Utricularia gibba
vmacro09552 Vaccinium macrocarpon
vmacro22280 Vaccinium macrocarpon
vmacro23294 Vaccinium macrocarpon
VMungo0540G1811 Vigna mungo
VMungo1127G2226 Vigna mungo
Zm00001eb105660 Zea mays
Zm00001eb322290 Zea mays

User provided reference genes

Program Settings