Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07000 Brassica napus
A03p60610 Brassica napus
A05p03280 Brassica napus
A08p18700 Brassica napus
Aa31LG2G19070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.613 Anthoceros agrestis
Actinidia02482 Actinidia chinensis
Actinidia31878 Actinidia chinensis
Actinidia38523 Actinidia chinensis
Ah.09g234230 Amaranthus hybridus
AL7G20780 Arabidopsis lyrata
Aqoxy7G02672 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21Q806 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AGKE2S Arachis hypogaea
AT4G31300 Arabidopsis thaliana
ATR0626G170 Amborella trichopoda
ATR0796G318 Amborella trichopoda
Atru.chr1.909 Acer truncatum
Atru.chr13.1615 Acer truncatum
Atru.chr7.2666 Acer truncatum
Atru.chr7.2688 Acer truncatum
Atru.chr7.2690 Acer truncatum
AUR62020647 Chenopodium quinoa
AUR62038728 Chenopodium quinoa
BcaB03g12688 Brassica carinata
BcaC01g01103 Brassica carinata
BcaC09g51907 Brassica carinata
BcaNung01533 Brassica carinata
BcaNung05317 Brassica carinata
BolC1t00756H Brassica oleracea
BolC3t21119H Brassica oleracea
BolC7t46306H Brassica oleracea
BraA01t00651Z Brassica rapa
BraA03t15102Z Brassica rapa
BraA05t19317Z Brassica rapa
BraA08t33831Z Brassica rapa
C01p07730 Brassica napus
C03p88100 Brassica napus
C07p58510 Brassica napus
CAN.G106.10 Capsicum annuum
CAN.G1273.13 Capsicum annuum
CAN.G1273.9 Capsicum annuum
CAN.G228.7 Capsicum annuum
CANSAT25G3289 Cannabis sativa
CANSAT64G1923 Cannabis sativa
CARHR239170 Cardamine hirsuta
Carub.0007s0926 Capsella rubella
Ca_15639_v3 Cicer arietinum L.
CBR_g55787 Chara braunii
Cc00_g00190 Coffea canephora
CDE04G3274 Ceratophyllum demersum
Cfa010143 Carpinus fangiana
Cfa013309 Carpinus fangiana
Ciclev10009349m.g Citrus clementina
CiPaw.04G053900 Carya illinoinensis
CiPaw.07G209900 Carya illinoinensis
CiPaw.08G021300 Carya illinoinensis
CiPaw.15G028500 Carya illinoinensis
ClCG08G012530 Citrullus lanatus
COL.COLO4_18628 Corchorus olitorius
Cpa.g.sc148.3 Carica papaya
Cre06.g279000 Chlamydomonas reinhardtii
Cre12.g531100 Chlamydomonas reinhardtii
CsaV3_2G031230 Cucumis sativus L.
CSS0000176 Camellia sinensis var. sinensis
DCAR_000673 Daucus carota
DCAR_000674 Daucus carota
DCAR_004564 Daucus carota
Dinv12605 Davidia involucrata
Dinv26471 Davidia involucrata
Dinv37493 Davidia involucrata
Duzib150G0262 Durio zibethinus
Duzib168G0804 Durio zibethinus
ECA240G0102 Erigeron canadensis
EL10Ac2g03687 Beta vulgaris
Eucgr.C02133 Eucalyptus grandis
FAN01G0072 Fragaria x ananassa
FAN03G3318 Fragaria x ananassa
FAN06G1260 Fragaria x ananassa
FAN06G5002 Fragaria x ananassa
FAN15G0754 Fragaria x ananassa
FAN20G0682 Fragaria x ananassa
FvH4_2g36480 Fragaria vesca
FvH4_7g10810 Fragaria vesca
Glyma.04G077400 Glycine max
Glyma.06G078500 Glycine max
Gohir.A05G066200 Gossypium hirsutum
Gohir.A13G181700 Gossypium hirsutum
Gohir.D05G068600 Gossypium hirsutum
Gohir.D13G185700 Gossypium hirsutum
Gorai.009G069600 Gossypium raimondii
Gorai.013G211700 Gossypium raimondii
GSVIVG01032253001 Vitis vinifera
GSVIVG01035567001 Vitis vinifera
HanXRQChr03g0067311 Helianthus annuus
HanXRQChr03g0081271 Helianthus annuus
Haze_21791 Corylus avellana
Haze_23530 Corylus avellana
Haze_27561 Corylus avellana
Hma1.2p1_0263F.1_g105450 Hydrangea macrophylla
Hma1.2p1_0443F.1_g154000 Hydrangea macrophylla
HPP92_004718 Vanilla planifolia
HPP92_021991 Vanilla planifolia
Hund03262 Selenicereus undatus
Hund19388 Selenicereus undatus
Lalb_Chr08g0243471 Lupinus albus
Lalb_Chr23g0269261 Lupinus albus
Lj1g0002632 Lotus japonicus
Lj4A319G22 Lonicera japonica
Lj6A275T62 Lonicera japonica
Lj6A275T63 Lonicera japonica
Lj6C279G2 Lonicera japonica
Lsat_1_v5_gn_5_56460 Lactuca sativa
Manes.03G001100 Manihot esculenta
Mapoly0016s0041 Marchantia polymorpha
MBI13_g34299_MAGBIO Magnolia biondii
MCO16G567 Micromonas commoda
MD08G1124600 Malus domestica
MD13G1234400 Malus domestica
MD15G1103300 Malus domestica
MD16G1239000 Malus domestica
Medtr3g108450 Medicago truncatula
Medtr3g109210 Medicago truncatula
MELO3C000704.2 Cucumis melo
MELO3C011172.2 Cucumis melo
Migut.J00835 Erythranthe guttata
Migut.L01915 Erythranthe guttata
MSTRG.10467 Avicennia marina
MSTRG.19395 Avicennia marina
Nitab4.5_0000092g0110 Nicotiana tabacum
Nitab4.5_0000368g0420 Nicotiana tabacum
Nitab4.5_0000404g0220 Nicotiana tabacum
Nitab4.5_0000749g0120 Nicotiana tabacum
Nitab4.5_0000899g0140 Nicotiana tabacum
Nitab4.5_0001535g0020 Nicotiana tabacum
Nitab4.5_0002715g0030 Nicotiana tabacum
Nitab4.5_0007423g0010 Nicotiana tabacum
Nitab4.5_0012992g0020 Nicotiana tabacum
Nn1g03129 Nelumbo nucifera
Nn3g19887 Nelumbo nucifera
Oeu021030.1 Olea europaea
Oeu036948.2 Olea europaea
Os02g0770000 Oryza sativa ssp. japonica
Os06g0139900 Oryza sativa ssp. japonica
Peaxi162Scf00000g00649 Petunia axillaris
Peaxi162Scf00320g00122 Petunia axillaris
PGR044G1928 Punica granatum
PGSC0003DMG400009772 Solanum tuberosum
PGSC0003DMG400013685 Solanum tuberosum
PGSC0003DMG400020027 Solanum tuberosum
PGSC0003DMG400037137 Solanum tuberosum
PGSC0003DMG400038195 Solanum tuberosum
PGSC0003DMG400042943 Solanum tuberosum
Phvul.009G103400 Phaseolus vulgaris
Potri.006G077900 Populus trichocarpa
Potri.018G145900 Populus trichocarpa
Pp3c18_17380 Physcomitrium patens
PRCOL_00005615 Prasinoderma coloniale
PRCOL_00006052 Prasinoderma coloniale
Prupe.1G065200 Prunus persica
Prupe.1G456200 Prunus persica
Psat5g024560 Pisum sativum
PSO170G5091 Papaver somniferum
PSO210G2204 Papaver somniferum
QL01p024860 Quercus lobata
QL12p025844 Quercus lobata
RcHm_v2.0_Chr2g0148551 Rosa chinensis
RcHm_v2.0_Chr6g0299991 Rosa chinensis
RcHm_v2.0_Chr6g0305401 Rosa chinensis
Rhsim01G0218400 Rhododendron simsii
Rhsim03G0268700 Rhododendron simsii
RhsimUnG0051400 Rhododendron simsii
Sabra06G0058900 Salix brachista
Sabra18G0120300 Salix brachista
Sabra18G0127800 Salix brachista
SalBow6G4635 Salvia bowleyana
Sc06g0001250 Simmondsia chinensis
Sed0022704 Sechium edule
Sed0024231 Sechium edule
SEGI_32352 Sequoiadendron giganteum
SEGI_36081 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09610 Striga asiatica
SGA_v2.0_scaffold450G51802 Striga asiatica
SMO117G0031 Selaginella moellendorffii
Solyc07g016200.3 Solanum lycopersicum
Sopen05g027780 Solanum pennellii
Sopen07g005910 Solanum pennellii
Sp7g29150 Schrenkiella parvula
TAR383G0138 Trochodendron aralioides
TAR383G1016 Trochodendron aralioides
TAR636G3035 Trochodendron aralioides
THA.LOC104803586 Tarenaya hassleriana
THA.LOC104819924 Tarenaya hassleriana
Thecc.09G002600 Theobroma cacao
Thhalv10026126m.g Eutrema salsugineum
TPR.G12492 Trifolium pratense
TWI34G1105 Tripterygium wilfordii
TWI63G0177 Tripterygium wilfordii
unitig_578.g16397 Utricularia gibba
vmacro15777 Vaccinium macrocarpon
VMungo1309G0072 Vigna mungo
Zm00001eb270240 Zea mays
Zm00001eb377530 Zea mays

User provided reference genes

Program Settings