Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p12750 Brassica napus
A10p24430 Brassica napus
A10p24890 Brassica napus
Aa31LG11G15410 Aethionema arabicum
Aa31LG3G14350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.605 Anthoceros agrestis
Actinidia22119 Actinidia chinensis
Actinidia30590 Actinidia chinensis
Actinidia36245 Actinidia chinensis
Ah.03g136390 Amaranthus hybridus
Ah.09g236390 Amaranthus hybridus
Ah.14g088790 Amaranthus hybridus
AL6G23930 Arabidopsis lyrata
AL6G24630 Arabidopsis lyrata
Aqoxy6G00186 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea
AT5G13310 Arabidopsis thaliana
AT5G13970 Arabidopsis thaliana
ATR0582G197 Amborella trichopoda
Atru.chr12.1405 Acer truncatum
Atru.chr6.2693 Acer truncatum
AUR62012502 Chenopodium quinoa
AUR62014693 Chenopodium quinoa
AUR62017428 Chenopodium quinoa
AUR62037825 Chenopodium quinoa
BcaC01g02664 Brassica carinata
BcaC04g19123 Brassica carinata
BcaC04g20129 Brassica carinata
BcaC09g48308 Brassica carinata
BcaNung03374 Brassica carinata
BolC1t05110H Brassica oleracea
BolC2t08454H Brassica oleracea
BolC3t17016H Brassica oleracea
BolC3t18480H Brassica oleracea
BolC7t42848H Brassica oleracea
BolC9t53871H Brassica oleracea
BolC9t59151H Brassica oleracea
BraA05t20213Z Brassica rapa
BraA10t44509Z Brassica rapa
BraA10t44552Z Brassica rapa
C01p04570 Brassica napus
C01p51670 Brassica napus
C03p62180 Brassica napus
C07p23110 Brassica napus
C08p31050 Brassica napus
C08p33300 Brassica napus
C09p09610 Brassica napus
C09p11640 Brassica napus
C09p44800 Brassica napus
C09p60140 Brassica napus
C09p63160 Brassica napus
C09p63750 Brassica napus
CAN.G1061.1 Capsicum annuum
CAN.G7.8 Capsicum annuum
CANSAT64G2275 Cannabis sativa
CARHR199410 Cardamine hirsuta
CARHR199420 Cardamine hirsuta
CARHR200130 Cardamine hirsuta
Carub.0006s1148 Capsella rubella
Carub.0006s1216 Capsella rubella
Ca_08145_v3 Cicer arietinum L.
CBR_g34048 Chara braunii
Cc07_g01280 Coffea canephora
CDE05G0540 Ceratophyllum demersum
CDE05G1535 Ceratophyllum demersum
Cfa007165 Carpinus fangiana
Cfa009444 Carpinus fangiana
Ciclev10005064m.g Citrus clementina
Ciclev10015333m.g Citrus clementina
CiPaw.04G001500 Carya illinoinensis
CiPaw.06G109000 Carya illinoinensis
ClCG05G012630 Citrullus lanatus
COL.COLO4_13374 Corchorus olitorius
COL.COLO4_21771 Corchorus olitorius
Cpa.g.sc38.89 Carica papaya
Cpa.g.sc70.68 Carica papaya
CsaV3_3G027780 Cucumis sativus L.
CSS0018885 Camellia sinensis var. sinensis
CSS0041611 Camellia sinensis var. sinensis
CSS0045312 Camellia sinensis var. sinensis
DCAR_002970 Daucus carota
Dinv01473 Davidia involucrata
Dinv19304 Davidia involucrata
Dinv25618 Davidia involucrata
Duzib132G1102 Durio zibethinus
Duzib147G0361 Durio zibethinus
Duzib187G1855 Durio zibethinus
ECA234G2936 Erigeron canadensis
ECA246G3772 Erigeron canadensis
EL10Ac6g13403 Beta vulgaris
EL10Ac8g20553 Beta vulgaris
Eucgr.I02446 Eucalyptus grandis
FAN05G4320 Fragaria x ananassa
FAN05G4592 Fragaria x ananassa
FAN05G5138 Fragaria x ananassa
FAN05G5404 Fragaria x ananassa
FAN07G0868 Fragaria x ananassa
FAN09G0861 Fragaria x ananassa
FAN12G1414 Fragaria x ananassa
FAN14G0132 Fragaria x ananassa
FAN14G1380 Fragaria x ananassa
FAN17G1075 Fragaria x ananassa
FvH4_4g22730 Fragaria vesca
FvH4_6g20211 Fragaria vesca
FvH4_6g54290 Fragaria vesca
Glyma.16G047900 Glycine max
Glyma.19G103400 Glycine max
Gohir.A03G152100 Gossypium hirsutum
Gohir.A07G232700 Gossypium hirsutum
Gohir.D02G175200 Gossypium hirsutum
Gohir.D07G239900 Gossypium hirsutum
Gorai.001G276100 Gossypium raimondii
Gorai.005G196800 Gossypium raimondii
GSVIVG01001080001 Vitis vinifera
HanXRQChr12g0384731 Helianthus annuus
HanXRQChr17g0550921 Helianthus annuus
Haze_12496 Corylus avellana
Haze_14949 Corylus avellana
Hma1.2p1_0421F.1_g149960 Hydrangea macrophylla
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla
HPP92_006450 Vanilla planifolia
HPP92_027984 Vanilla planifolia
Hund04187 Selenicereus undatus
Hund23589 Selenicereus undatus
Lalb_Chr14g0364121 Lupinus albus
Lalb_Chr22g0359971 Lupinus albus
Lj1g0011786 Lotus japonicus
Lj6P837T11 Lonicera japonica
Lj7A617T72 Lonicera japonica
Lsat_1_v5_gn_0_41321 Lactuca sativa
Lsat_1_v5_gn_4_1521 Lactuca sativa
Lsat_1_v5_gn_5_86841 Lactuca sativa
Manes.08G101800 Manihot esculenta
Manes.09G187602 Manihot esculenta
Manes.11G076800 Manihot esculenta
Mapoly0001s0546 Marchantia polymorpha
MBI07_g41898_MAGBIO Magnolia biondii
MD09G1002700 Malus domestica
MD13G1129900 Malus domestica
MD17G1006900 Malus domestica
Medtr7g084070 Medicago truncatula
MELO3C014781.2 Cucumis melo
Migut.E00693 Erythranthe guttata
MSTRG.2062 Avicennia marina
Nitab4.5_0002116g0010 Nicotiana tabacum
Nitab4.5_0005424g0010 Nicotiana tabacum
Nn4g22138 Nelumbo nucifera
Oeu027918.1 Olea europaea
Os04g0397400 Oryza sativa ssp. japonica
Peaxi162Scf00171g00621 Petunia axillaris
PGR142G1656 Punica granatum
PGSC0003DMG400004243 Solanum tuberosum
PGSC0003DMG400021424 Solanum tuberosum
Phvul.001G084300 Phaseolus vulgaris
Potri.002G238100 Populus trichocarpa
Potri.003G163100 Populus trichocarpa
Potri.014G143800 Populus trichocarpa
Pp3c5_23700 Physcomitrium patens
Prupe.1G216200 Prunus persica
Prupe.3G313500 Prunus persica
Psat3g093320 Pisum sativum
PSO017G0829 Papaver somniferum
PSO478G4908 Papaver somniferum
QL02p069539 Quercus lobata
QL03p049546 Quercus lobata
RcHm_v2.0_Chr2g0176501 Rosa chinensis
RcHm_v2.0_Chr3g0475791 Rosa chinensis
RcHm_v2.0_Chr4g0428951 Rosa chinensis
Rhsim08G0039200 Rhododendron simsii
Rhsim12G0017700 Rhododendron simsii
Sabra02G0181500 Salix brachista
Sabra03G0118600 Salix brachista
SalBow6G4465 Salvia bowleyana
SalBow6G5409 Salvia bowleyana
Sc03g0005220 Simmondsia chinensis
Sc17g0006750 Simmondsia chinensis
Sed0002814 Sechium edule
Sed0021165 Sechium edule
SGA_v2.0_scaffold306G48013 Striga asiatica
Solyc02g091940.3 Solanum lycopersicum
Solyc04g024520.3 Solanum lycopersicum
Sopen02g036510 Solanum pennellii
Sopen04g017060 Solanum pennellii
Sp6g30030 Schrenkiella parvula
Sp6g30680 Schrenkiella parvula
TAR374G0325 Trochodendron aralioides
TAR475G0001 Trochodendron aralioides
THA.LOC104825281 Tarenaya hassleriana
THA.LOC104825464 Tarenaya hassleriana
Thecc.02G193300 Theobroma cacao
Thecc.04G047800 Theobroma cacao
Thhalv10013725m.g Eutrema salsugineum
Thhalv10013755m.g Eutrema salsugineum
TWI32G0366 Tripterygium wilfordii
TWI36G1473 Tripterygium wilfordii
TWI75G1860 Tripterygium wilfordii
unitig_22.g5626 Utricularia gibba
vmacro01023 Vaccinium macrocarpon
vmacro18379 Vaccinium macrocarpon
VMungo1383G3656 Vigna mungo
Zm00001eb084870 Zea mays
Zm00001eb421370 Zea mays

User provided reference genes

Program Settings