Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22500 Brassica napus
A03p37900 Brassica napus
A05p36530 Brassica napus
A07p44200 Brassica napus
Aa31LG10G190 Aethionema arabicum
Aa31LG4G1930 Aethionema arabicum
Aa31LG8G210 Aethionema arabicum
Ah.06g186930 Amaranthus hybridus
AL1G64260 Arabidopsis lyrata
AL2G39520 Arabidopsis lyrata
AL3G24660 Arabidopsis lyrata
Aqoxy1G01600 Aquilegia oxysepala
Aqoxy4G00055 Aquilegia oxysepala
AT1G56020 Arabidopsis thaliana
AT1G79060 Arabidopsis thaliana
AT3G12970 Arabidopsis thaliana
ATR1098G156 Amborella trichopoda
Atru.chr2.1885 Acer truncatum
AUR62035506 Chenopodium quinoa
AUR62041924 Chenopodium quinoa
BcaB02g08663 Brassica carinata
BcaB04g18740 Brassica carinata
BcaB04g18742 Brassica carinata
BcaB05g25170 Brassica carinata
BcaB06g25497 Brassica carinata
BcaB07g33177 Brassica carinata
BcaC01g04046 Brassica carinata
BcaC03g15862 Brassica carinata
BcaC05g29221 Brassica carinata
BcaC08g43669 Brassica carinata
BcaC08g43670 Brassica carinata
BcaC08g47469 Brassica carinata
BolC2t09631H Brassica oleracea
BolC3t16872H Brassica oleracea
BolC5t34164H Brassica oleracea
BolC6t36173H Brassica oleracea
BolC6t40311H Brassica oleracea
BraA02t07254Z Brassica rapa
BraA03t12944Z Brassica rapa
BraA05t22454Z Brassica rapa
BraA07t31928Z Brassica rapa
BraSC56t46389Z Brassica rapa
C02p36170 Brassica napus
C03p46000 Brassica napus
C05p54950 Brassica napus
C06p10920 Brassica napus
C06p52930 Brassica napus
CAN.G492.68 Capsicum annuum
CAN.G943.30 Capsicum annuum
CANSAT56G2341 Cannabis sativa
CARHR045750 Cardamine hirsuta
CARHR072730 Cardamine hirsuta
CARHR087500 Cardamine hirsuta
Carub.0001s4461 Capsella rubella
Carub.0002s2593 Capsella rubella
Carub.0003s1231 Capsella rubella
Ca_03691_v3 Cicer arietinum L.
Cc05_g15980 Coffea canephora
CDE02G3174 Ceratophyllum demersum
CDE02G4756 Ceratophyllum demersum
CDE03G0417 Ceratophyllum demersum
CDE04G2574 Ceratophyllum demersum
CDE06G2593 Ceratophyllum demersum
CDE12G0640 Ceratophyllum demersum
Cfa019437 Carpinus fangiana
Ciclev10020533m.g Citrus clementina
CiPaw.11G069100 Carya illinoinensis
CiPaw.12G011400 Carya illinoinensis
ClCG07G010650 Citrullus lanatus
ClCG11G016320 Citrullus lanatus
COL.COLO4_05068 Corchorus olitorius
Cpa.g.sc10.34 Carica papaya
CsaV3_4G007650 Cucumis sativus L.
DCAR_013748 Daucus carota
DCAR_016819 Daucus carota
Dinv42522 Davidia involucrata
Duzib187G0305 Durio zibethinus
Duzib213G0602 Durio zibethinus
Duzib268G0800 Durio zibethinus
ECA240G3043 Erigeron canadensis
EL10Ac4g08557 Beta vulgaris
Eucgr.F03185 Eucalyptus grandis
FAN11G3371 Fragaria x ananassa
FAN16G0606 Fragaria x ananassa
FAN21G3059 Fragaria x ananassa
FAN25G3092 Fragaria x ananassa
FvH4_3g16010 Fragaria vesca
Glyma.08G173100 Glycine max
Glyma.15G254400 Glycine max
Gohir.A01G037400 Gossypium hirsutum
Gohir.A08G232800 Gossypium hirsutum
Gohir.A13G153200 Gossypium hirsutum
Gohir.D01G024700 Gossypium hirsutum
Gohir.D08G253000 Gossypium hirsutum
Gohir.D13G157800 Gossypium hirsutum
Gorai.002G033200 Gossypium raimondii
Gorai.004G269800 Gossypium raimondii
Gorai.013G178500 Gossypium raimondii
GSVIVG01020462001 Vitis vinifera
HanXRQChr03g0078121 Helianthus annuus
HanXRQChr05g0160621 Helianthus annuus
HanXRQChr13g0409331 Helianthus annuus
HanXRQChr14g0459911 Helianthus annuus
Haze_08530 Corylus avellana
Hma1.2p1_0193F.1_g084510 Hydrangea macrophylla
HPP92_011020 Vanilla planifolia
HPP92_013988 Vanilla planifolia
HPP92_016667 Vanilla planifolia
HPP92_016668 Vanilla planifolia
Lalb_Chr01g0007051 Lupinus albus
Lalb_Chr03g0031581 Lupinus albus
Lalb_Chr19g0133441 Lupinus albus
Lalb_Chr25g0285141 Lupinus albus
Lj1P904T3 Lonicera japonica
Lj3g0009945 Lotus japonicus
Lsat_1_v5_gn_7_72140 Lactuca sativa
Manes.06G169800 Manihot esculenta
MBI02_g25678_MAGBIO Magnolia biondii
MBI18_g28204_MAGBIO Magnolia biondii
MD05G1215900 Malus domestica
MD10G1198500 Malus domestica
Medtr2g069770 Medicago truncatula
MELO3C016176.2 Cucumis melo
Migut.H01699 Erythranthe guttata
Migut.M01564 Erythranthe guttata
MSTRG.13058 Avicennia marina
MSTRG.16116 Avicennia marina
MSTRG.7055 Avicennia marina
Nitab4.5_0000611g0080 Nicotiana tabacum
Nitab4.5_0001749g0060 Nicotiana tabacum
Nitab4.5_0007742g0010 Nicotiana tabacum
Nn1g07590 Nelumbo nucifera
Nn7g37824 Nelumbo nucifera
Nn7g37825 Nelumbo nucifera
Oeu003838.1 Olea europaea
Oeu017793.1 Olea europaea
Oeu034569.1 Olea europaea
Oeu047952.1 Olea europaea
Oeu056998.1 Olea europaea
Os01g0888022 Oryza sativa ssp. japonica
Os02g0165500 Oryza sativa ssp. japonica
Os04g0618950 Oryza sativa ssp. japonica
Os06g0675200 Oryza sativa ssp. japonica
Os12g0610300 Oryza sativa ssp. japonica
Peaxi162Scf00232g01110 Petunia axillaris
PGR004G2404 Punica granatum
PGR031G1087 Punica granatum
PGR042G1409 Punica granatum
PGR102G0582 Punica granatum
PGSC0003DMG400011275 Solanum tuberosum
PGSC0003DMG400022132 Solanum tuberosum
Phvul.005G055800 Phaseolus vulgaris
Potri.005G098300 Populus trichocarpa
Potri.007G065200 Populus trichocarpa
Prupe.4G143300 Prunus persica
Psat1g002640 Pisum sativum
PSO541G4195 Papaver somniferum
PSO675G7316 Papaver somniferum
QL04p074651 Quercus lobata
RcHm_v2.0_Chr5g0026971 Rosa chinensis
Rhsim04G0006000 Rhododendron simsii
Sabra05G0080700 Salix brachista
Sabra07G0052800 Salix brachista
Sc03g0007900 Simmondsia chinensis
Sed0006922 Sechium edule
Sed0028071 Sechium edule
SEGI_10387 Sequoiadendron giganteum
SEGI_26176 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40226 Striga asiatica
SGA_v2.0_scaffold92G28146 Striga asiatica
SHI21373 Sapria himalayana
Solyc07g066350.1 Solanum lycopersicum
Solyc10g005610.2 Solanum lycopersicum
Sopen07g034530 Solanum pennellii
Sopen10g001580 Solanum pennellii
Sp1g41630 Schrenkiella parvula
Sp3g11120 Schrenkiella parvula
Sp5g34110 Schrenkiella parvula
TAR627G0521 Trochodendron aralioides
TAR629G0110 Trochodendron aralioides
THA.LOC104808115 Tarenaya hassleriana
THA.LOC104812352 Tarenaya hassleriana
THA.LOC104815712 Tarenaya hassleriana
Thecc.07G155900 Theobroma cacao
Thhalv10012288m.g Eutrema salsugineum
Thhalv10018666m.g Eutrema salsugineum
Thhalv10021938m.g Eutrema salsugineum
TPR.G9748 Trifolium pratense
TWI38G1331 Tripterygium wilfordii
TWI38G1432 Tripterygium wilfordii
unitig_0.g974 Utricularia gibba
unitig_26.g10083 Utricularia gibba
unitig_61.g26127 Utricularia gibba
unitig_749.g13701 Utricularia gibba
unitig_8.g4769 Utricularia gibba
VMungo1080G1310 Vigna mungo
Zm00001eb070500 Zea mays
Zm00001eb135880 Zea mays
Zm00001eb207420 Zea mays
Zm00001eb224830 Zea mays
Zm00001eb232780 Zea mays
Zm00001eb273950 Zea mays
Zm00001eb431090 Zea mays

User provided reference genes

Program Settings