Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42640 Brassica napus
Aa31LG1G18720 Aethionema arabicum
Aa31LG9G930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2626 Anthoceros agrestis
Actinidia16193 Actinidia chinensis
Actinidia35294 Actinidia chinensis
Actinidia36786 Actinidia chinensis
Actinidia37253 Actinidia chinensis
Ah.15g095330 Amaranthus hybridus
AL7G49030 Arabidopsis lyrata
AL8G40360 Arabidopsis lyrata
Aqoxy5G03585 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1ZZG3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2XD07Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AN2TAK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8INVP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EV1HEV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EW7TJJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IW1VVW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M32IQ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PLK8LK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.THGE5Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8QTTL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z9T13B Arachis hypogaea
AT5G40710 Arabidopsis thaliana
AT5G63280 Arabidopsis thaliana
ATR0723G044 Amborella trichopoda
Atru.chr6.2474 Acer truncatum
Atru.chr9.1007 Acer truncatum
AUR62001275 Chenopodium quinoa
AUR62018229 Chenopodium quinoa
AUR62025731 Chenopodium quinoa
BcaB07g29680 Brassica carinata
BcaC03g18189 Brassica carinata
BcaC03g18190 Brassica carinata
BcaC03g18192 Brassica carinata
BcaC05g28957 Brassica carinata
BcaC05g28958 Brassica carinata
BolC2t12314H Brassica oleracea
BolC3t14658H Brassica oleracea
BolC5t33837H Brassica oleracea
BolC6t38937H Brassica oleracea
BraA02t09192Z Brassica rapa
C02p16130 Brassica napus
C02p62550 Brassica napus
C04p51790 Brassica napus
C05p51520 Brassica napus
C06p38380 Brassica napus
C09p52320 Brassica napus
CAN.G352.7 Capsicum annuum
CANSAT64G0613 Cannabis sativa
CANSAT80G1098 Cannabis sativa
CARHR213800 Cardamine hirsuta
CARHR277130 Cardamine hirsuta
Carub.0008s2403 Capsella rubella
Ca_05565_v3 Cicer arietinum L.
Ca_14750_v3 Cicer arietinum L.
CBR_g52069 Chara braunii
Cc04_g10450 Coffea canephora
CDE02G1324 Ceratophyllum demersum
CDE09G1349 Ceratophyllum demersum
Cfa007288 Carpinus fangiana
Cfa018894 Carpinus fangiana
Ciclev10016239m.g Citrus clementina
Ciclev10020738m.g Citrus clementina
CiPaw.04G032500 Carya illinoinensis
CiPaw.11G012200 Carya illinoinensis
ClCG05G013160 Citrullus lanatus
ClCG06G017640 Citrullus lanatus
ClCG06G017650 Citrullus lanatus
COL.COLO4_29261 Corchorus olitorius
Cpa.g.sc130.47 Carica papaya
Cpa.g.sc4.69 Carica papaya
CsaV3_1G000800 Cucumis sativus L.
CsaV3_3G027390 Cucumis sativus L.
CSS0047112 Camellia sinensis var. sinensis
DCAR_007468 Daucus carota
DCAR_026208 Daucus carota
Dinv11107 Davidia involucrata
Dinv38473 Davidia involucrata
Duzib205G2021 Durio zibethinus
Duzib264G0961 Durio zibethinus
ECA247G0476 Erigeron canadensis
EL10Ac7g18071 Beta vulgaris
Eucgr.J02278 Eucalyptus grandis
Eucgr.K02758 Eucalyptus grandis
FAN02G0219 Fragaria x ananassa
FAN04G1323 Fragaria x ananassa
FAN05G1134 Fragaria x ananassa
FAN08G1495 Fragaria x ananassa
FAN14G1266 Fragaria x ananassa
FAN18G1106 Fragaria x ananassa
FvH4_5g07330 Fragaria vesca
FvH4_6g52420 Fragaria vesca
Glyma.08G319000 Glycine max
Glyma.13G086300 Glycine max
Glyma.14G168600 Glycine max
Glyma.18G094500 Glycine max
Gohir.A05G342200 Gossypium hirsutum
Gohir.A07G053700 Gossypium hirsutum
Gohir.D04G080400 Gossypium hirsutum
Gohir.D07G058100 Gossypium hirsutum
Gorai.001G061600 Gossypium raimondii
Gorai.003G153400 Gossypium raimondii
Gorai.012G090700 Gossypium raimondii
GSVIVG01003967001 Vitis vinifera
GSVIVG01007546001 Vitis vinifera
HanXRQChr04g0100731 Helianthus annuus
Haze_07278 Corylus avellana
Haze_14805 Corylus avellana
Hma1.2p1_0046F.1_g027570 Hydrangea macrophylla
HPP92_021371 Vanilla planifolia
Hund05644 Selenicereus undatus
Lalb_Chr13g0297431 Lupinus albus
Lalb_Chr15g0081431 Lupinus albus
Lj4g0019567 Lotus japonicus
Lj5C100T14 Lonicera japonica
Lj6g0014345 Lotus japonicus
Lsat_1_v5_gn_1_29501 Lactuca sativa
Lsat_1_v5_gn_5_9541 Lactuca sativa
Manes.06G115000 Manihot esculenta
Manes.14G055400 Manihot esculenta
Manes.15G155700 Manihot esculenta
Mapoly0016s0064 Marchantia polymorpha
MBI11_g36296_MAGBIO Magnolia biondii
MCO05G523 Micromonas commoda
MD06G1153500 Malus domestica
MD06G1157300 Malus domestica
MD09G1018200 Malus domestica
MD14G1163900 Malus domestica
Medtr3g052770 Medicago truncatula
Medtr4g104230 Medicago truncatula
MELO3C014840.2 Cucumis melo
MELO3C026232.2 Cucumis melo
Migut.I00253 Erythranthe guttata
Migut.I00466 Erythranthe guttata
MSTRG.11295 Avicennia marina
Nitab4.5_0003282g0080 Nicotiana tabacum
Nitab4.5_0004750g0030 Nicotiana tabacum
Nn4g22463 Nelumbo nucifera
Oeu045481.1 Olea europaea
Os12g0233400 Oryza sativa ssp. japonica
Peaxi162Scf00089g00637 Petunia axillaris
PGR044G0111 Punica granatum
PGR083G1927 Punica granatum
PGSC0003DMG400015181 Solanum tuberosum
Phvul.006G046100 Phaseolus vulgaris
Phvul.008G170300 Phaseolus vulgaris
Potri.001G336500 Populus trichocarpa
Potri.015G090300 Populus trichocarpa
Pp3c20_14750 Physcomitrium patens
Pp3c23_14910 Physcomitrium patens
PRCOL_00003415 Prasinoderma coloniale
Prupe.3G298900 Prunus persica
Prupe.5G157300 Prunus persica
Psat4g062720 Pisum sativum
Psat5g174720 Pisum sativum
PSO063G7397 Papaver somniferum
PSO782G5587 Papaver somniferum
QL02p073044 Quercus lobata
QL02p073113 Quercus lobata
QL02p073211 Quercus lobata
QL10p005254 Quercus lobata
RcHm_v2.0_Chr2g0174061 Rosa chinensis
RcHm_v2.0_Chr7g0191231 Rosa chinensis
Rhsim08G0184900 Rhododendron simsii
Rhsim12G0171900 Rhododendron simsii
Sabra15G0112500 Salix brachista
Sabra16G0217300 Salix brachista
SalBow5G5513 Salvia bowleyana
SalBow5G5562 Salvia bowleyana
Sc03g0006920 Simmondsia chinensis
Sc03g0006980 Simmondsia chinensis
Sc04g0000980 Simmondsia chinensis
Sed0001198 Sechium edule
Sed0017360 Sechium edule
Sed0026914 Sechium edule
SEGI_38219 Sequoiadendron giganteum
SGA_v2.0_scaffold161G37857 Striga asiatica
SMO143G0157 Selaginella moellendorffii
Solyc03g111370.3 Solanum lycopersicum
Sopen03g030500 Solanum pennellii
Sp2g26400 Schrenkiella parvula
TAR371G0872 Trochodendron aralioides
TAR622G0704 Trochodendron aralioides
THA.LOC104821504 Tarenaya hassleriana
THA.LOC104825306 Tarenaya hassleriana
Thecc.03G122500 Theobroma cacao
Thecc.04G025900 Theobroma cacao
Thhalv10004713m.g Eutrema salsugineum
Thhalv10027883m.g Eutrema salsugineum
TPR.G33745 Trifolium pratense
TPR.G37445 Trifolium pratense
TWI14G0407 Tripterygium wilfordii
TWI39G1178 Tripterygium wilfordii
TWI56G0847 Tripterygium wilfordii
vmacro16707 Vaccinium macrocarpon
vmacro19240 Vaccinium macrocarpon
vmacro23152 Vaccinium macrocarpon
vmacro23153 Vaccinium macrocarpon
vmacro23158 Vaccinium macrocarpon
VMungo0540G0103 Vigna mungo
VMungo0647G1398 Vigna mungo
Zm00001eb411670 Zea mays

User provided reference genes

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