Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11730 Brassica napus
Aa31LG7G360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1382 Anthoceros agrestis
Actinidia08955 Actinidia chinensis
Actinidia15973 Actinidia chinensis
Actinidia15974 Actinidia chinensis
Ah.09g224100 Amaranthus hybridus
AL1G27850 Arabidopsis lyrata
Aqoxy7G02456 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H7Z4S8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JM4LQW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MWAB5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NFA80P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3C7Q8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TB3UR8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YII6YD Arachis hypogaea
AT1G15740 Arabidopsis thaliana
ATR0767G175 Amborella trichopoda
Atru.chr1.2849 Acer truncatum
Atru.chr7.2012 Acer truncatum
AUR62011226 Chenopodium quinoa
AUR62020008 Chenopodium quinoa
BcaC05g25516 Brassica carinata
BolC5t30122H Brassica oleracea
BraA06t24343Z Brassica rapa
C05p13880 Brassica napus
CAN.G125.26 Capsicum annuum
CAN.G1281.4 Capsicum annuum
CAN.G407.25 Capsicum annuum
CAN.G426.10 Capsicum annuum
CAN.G509.10 Capsicum annuum
CAN.G551.67 Capsicum annuum
CANSAT11G0288 Cannabis sativa
CANSAT56G3261 Cannabis sativa
CARHR016230 Cardamine hirsuta
Carub.0001s1551 Capsella rubella
Ca_12515_v3 Cicer arietinum L.
Ca_21637_v3 Cicer arietinum L.
Cc04_g04660 Coffea canephora
Cc06_g07660 Coffea canephora
CDE05G0968 Ceratophyllum demersum
Ciclev10025249m.g Citrus clementina
CiPaw.01G250600 Carya illinoinensis
CiPaw.02G158600 Carya illinoinensis
ClCG09G003110 Citrullus lanatus
COL.COLO4_11855 Corchorus olitorius
COL.COLO4_33367 Corchorus olitorius
Cpa.g.sc46.67 Carica papaya
CsaV3_7G032160 Cucumis sativus L.
CSS0014218 Camellia sinensis var. sinensis
DCAR_025527 Daucus carota
Dinv30637 Davidia involucrata
Dinv36449 Davidia involucrata
Dinv41445 Davidia involucrata
Duzib150G0304 Durio zibethinus
Duzib150G0604 Durio zibethinus
Duzib160G0541 Durio zibethinus
Duzib187G1093 Durio zibethinus
Duzib235G0043 Durio zibethinus
ECA246G4877 Erigeron canadensis
EL10Ac8g18785 Beta vulgaris
Eucgr.J03087 Eucalyptus grandis
FAN02G1685 Fragaria x ananassa
FAN05G3872 Fragaria x ananassa
FAN06G3182 Fragaria x ananassa
FAN06G4763 Fragaria x ananassa
FAN09G2631 Fragaria x ananassa
FAN10G2861 Fragaria x ananassa
FAN10G3145 Fragaria x ananassa
FAN14G3167 Fragaria x ananassa
FAN26G2276 Fragaria x ananassa
FAN28G0525 Fragaria x ananassa
FvH4_1g02020 Fragaria vesca
FvH4_6g29180 Fragaria vesca
FvH4_7g04581 Fragaria vesca
Glyma.07G028300 Glycine max
Glyma.08G214500 Glycine max
Glyma.13G163500 Glycine max
Glyma.13G367200 Glycine max
Glyma.15G006200 Glycine max
Glyma.17G107400 Glycine max
Gohir.A08G090300 Gossypium hirsutum
Gohir.A10G072100 Gossypium hirsutum
Gohir.D08G101300 Gossypium hirsutum
Gohir.D10G079000 Gossypium hirsutum
Gorai.004G109300 Gossypium raimondii
Gorai.011G085800 Gossypium raimondii
GSVIVG01012857001 Vitis vinifera
GSVIVG01017472001 Vitis vinifera
HanXRQChr09g0274781 Helianthus annuus
HanXRQChr17g0570311 Helianthus annuus
Haze_16605 Corylus avellana
Haze_16606 Corylus avellana
Hma1.2p1_0461F.1_g157700 Hydrangea macrophylla
HPP92_017331 Vanilla planifolia
HPP92_027277 Vanilla planifolia
Hund00496 Selenicereus undatus
Hund21595 Selenicereus undatus
Lalb_Chr01g0012261 Lupinus albus
Lalb_Chr12g0198401 Lupinus albus
Lj3g0011414 Lotus japonicus
Lj3g0027196 Lotus japonicus
Lj4g0018391 Lotus japonicus
Lj9A497T71 Lonicera japonica
Lsat_1_v5_gn_1_116221 Lactuca sativa
Lsat_1_v5_gn_4_88160 Lactuca sativa
Lsat_1_v5_gn_5_8861 Lactuca sativa
Manes.04G108700 Manihot esculenta
Manes.11G061100 Manihot esculenta
Manes.14G119228 Manihot esculenta
Mapoly0032s0095 Marchantia polymorpha
MBI14_g24987_MAGBIO Magnolia biondii
MCO10G095 Micromonas commoda
MD02G1018400 Malus domestica
MD15G1162400 Malus domestica
MD17G1216900 Malus domestica
MD17G1217000 Malus domestica
Medtr4g009870 Medicago truncatula
Medtr4g009873 Medicago truncatula
Medtr4g116170 Medicago truncatula
MELO3C023445.2 Cucumis melo
Migut.I00738 Erythranthe guttata
MSTRG.11160 Avicennia marina
MSTRG.22764 Avicennia marina
Nitab4.5_0001017g0020 Nicotiana tabacum
Nitab4.5_0002286g0090 Nicotiana tabacum
Nitab4.5_0002322g0060 Nicotiana tabacum
Nitab4.5_0002329g0140 Nicotiana tabacum
Nitab4.5_0008536g0030 Nicotiana tabacum
Nitab4.5_0009284g0020 Nicotiana tabacum
Nn2g12188 Nelumbo nucifera
Nn8g39646 Nelumbo nucifera
Oeu027837.1 Olea europaea
Oeu029903.1 Olea europaea
Os02g0613200 Oryza sativa ssp. japonica
Os04g0503500 Oryza sativa ssp. japonica
Peaxi162Scf00088g00618 Petunia axillaris
Peaxi162Scf00332g00127 Petunia axillaris
Peaxi162Scf01694g00019 Petunia axillaris
PGR031G1162 Punica granatum
PGSC0003DMG400007912 Solanum tuberosum
PGSC0003DMG400030688 Solanum tuberosum
Phvul.003G172400 Phaseolus vulgaris
Phvul.010G157600 Phaseolus vulgaris
Potri.006G061700 Populus trichocarpa
Pp3c4_3150 Physcomitrium patens
Pp3c8_1510 Physcomitrium patens
Prupe.3G092900 Prunus persica
Prupe.7G252400 Prunus persica
Psat0s520g0120 Pisum sativum
Psat0s571g0080 Pisum sativum
Psat1g109200 Pisum sativum
Psat1g123960 Pisum sativum
Psat7g257800 Pisum sativum
PSO017G3211 Papaver somniferum
PSO170G6803 Papaver somniferum
QL02p090717 Quercus lobata
QL05p032608 Quercus lobata
RcHm_v2.0_Chr1g0325881 Rosa chinensis
RcHm_v2.0_Chr2g0087081 Rosa chinensis
RcHm_v2.0_Chr2g0134401 Rosa chinensis
RcHm_v2.0_Chr5g0037401 Rosa chinensis
RcHm_v2.0_Chr6g0252571 Rosa chinensis
Rhsim12G0189300 Rhododendron simsii
Sabra06G0044400 Salix brachista
SalBow7G0810 Salvia bowleyana
SalBow7G3482 Salvia bowleyana
Sc08g0006030 Simmondsia chinensis
Sed0010441 Sechium edule
Sed0016861 Sechium edule
SEGI_28212 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05885 Striga asiatica
SGA_v2.0_scaffold37G14747 Striga asiatica
SGA_v2.0_scaffold38G14981 Striga asiatica
SHI02098 Sapria himalayana
SMO200G0229 Selaginella moellendorffii
Solyc03g117420.4 Solanum lycopersicum
Solyc07g007400.3 Solanum lycopersicum
Solyc07g007410.4 Solanum lycopersicum
Solyc07g007420.3 Solanum lycopersicum
Solyc12g009870.2 Solanum lycopersicum
Sopen03g036300 Solanum pennellii
Sopen07g003470 Solanum pennellii
Sp1g14030 Schrenkiella parvula
TAR383G0111 Trochodendron aralioides
TAR626G1829 Trochodendron aralioides
THA.LOC104808198 Tarenaya hassleriana
THA.LOC104812464 Tarenaya hassleriana
Thecc.06G033100 Theobroma cacao
Thecc.09G137400 Theobroma cacao
Thhalv10007169m.g Eutrema salsugineum
TPR.G27284 Trifolium pratense
TPR.G38632 Trifolium pratense
TPR.G7990 Trifolium pratense
TWI12G0888 Tripterygium wilfordii
TWI32G1011 Tripterygium wilfordii
TWI75G0489 Tripterygium wilfordii
unitig_699.g19089 Utricularia gibba
vmacro16874 Vaccinium macrocarpon
VMungo0251G3388 Vigna mungo
VMungo0331G0010 Vigna mungo
VMungo0459G0001 Vigna mungo
Zm00001eb078100 Zea mays
Zm00001eb247040 Zea mays

User provided reference genes

Program Settings