Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20030 Brassica napus
A04p06710 Brassica napus
A04p27810 Brassica napus
A05p09550 Brassica napus
A07p21190 Brassica napus
A09p45850 Brassica napus
Aa31LG5G21450 Aethionema arabicum
AL4G32430 Arabidopsis lyrata
AL5G33550 Arabidopsis lyrata
Aqoxy2G01218 Aquilegia oxysepala
Aqoxy4G02806 Aquilegia oxysepala
Aqoxy5G00910 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3KS0IU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V8S7TV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W71F47 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YCS2XP Arachis hypogaea
AT3G52770 Arabidopsis thaliana
ATR0820G297 Amborella trichopoda
Atru.chr12.1006 Acer truncatum
BcaB01g00341 Brassica carinata
BcaB01g00342 Brassica carinata
BcaB01g03851 Brassica carinata
BcaB02g07817 Brassica carinata
BcaB02g08554 Brassica carinata
BcaB02g09363 Brassica carinata
BcaB06g28928 Brassica carinata
BcaC01g05667 Brassica carinata
BcaC02g07614 Brassica carinata
BcaC02g07615 Brassica carinata
BcaC02g09220 Brassica carinata
BcaC02g11743 Brassica carinata
BcaC07g39642 Brassica carinata
BcaC08g44595 Brassica carinata
BNapus_Darmor_BZH_scaffold_239p00010 Brassica napus
BolC3t14744H Brassica oleracea
BolC4t22830H Brassica oleracea
BolC4t25595H Brassica oleracea
BolC4t28009H Brassica oleracea
BolC6t37250H Brassica oleracea
BolC8t50417H Brassica oleracea
BraA03t11254Z Brassica rapa
BraA04t16375Z Brassica rapa
BraA04t18273Z Brassica rapa
BraA05t19908Z Brassica rapa
BraA07t29806Z Brassica rapa
BraA09t40047Z Brassica rapa
C03p23480 Brassica napus
C04p11810 Brassica napus
C04p40170 Brassica napus
C04p65310 Brassica napus
C06p20670 Brassica napus
C08p28060 Brassica napus
CAN.G397.29 Capsicum annuum
CAN.G730.29 Capsicum annuum
CANSAT80G2147 Cannabis sativa
CARHR130590 Cardamine hirsuta
CARHR162650 Cardamine hirsuta
Carub.0004s1807 Capsella rubella
Carub.0005s1925 Capsella rubella
Ca_26655_v3 Cicer arietinum L.
Cc06_g05630 Coffea canephora
Cfa011263 Carpinus fangiana
Cfa016591 Carpinus fangiana
Ciclev10013416m.g Citrus clementina
Ciclev10033849m.g Citrus clementina
CiPaw.09G012500 Carya illinoinensis
CiPaw.10G008200 Carya illinoinensis
CiPaw.13G038600 Carya illinoinensis
ClCG10G019100 Citrullus lanatus
COL.COLO4_29771 Corchorus olitorius
Cpa.g.sc5.39 Carica papaya
CsaV3_3G037150 Cucumis sativus L.
CSS0011540 Camellia sinensis var. sinensis
CSS0017316 Camellia sinensis var. sinensis
CSS0023349 Camellia sinensis var. sinensis
DCAR_003370 Daucus carota
DCAR_009156 Daucus carota
DCAR_013380 Daucus carota
Dinv21222 Davidia involucrata
Duzib093G2149 Durio zibethinus
Duzib128G1587 Durio zibethinus
ECA238G0205 Erigeron canadensis
EL10Ac7g16935 Beta vulgaris
Eucgr.A01509 Eucalyptus grandis
Eucgr.G02695 Eucalyptus grandis
Eucgr.K02053 Eucalyptus grandis
FAN02G1444 Fragaria x ananassa
FAN05G2543 Fragaria x ananassa
FAN05G5428 Fragaria x ananassa
FAN09G1364 Fragaria x ananassa
FAN14G4582 Fragaria x ananassa
FvH4_6g18440 Fragaria vesca
Glyma.03G194300 Glycine max
Glyma.10G071100 Glycine max
Glyma.13G153018 Glycine max
Glyma.19G194100 Glycine max
Gohir.A01G207150 Gossypium hirsutum
Gohir.A04G064385 Gossypium hirsutum
Gohir.A09G138700 Gossypium hirsutum
Gohir.A12G092744 Gossypium hirsutum
Gohir.D01G196550 Gossypium hirsutum
Gohir.D04G100900 Gossypium hirsutum
Gohir.D12G091360 Gossypium hirsutum
Gorai.002G240800 Gossypium raimondii
Gorai.006G156000 Gossypium raimondii
Gorai.008G098900 Gossypium raimondii
Gorai.009G404100 Gossypium raimondii
GSVIVG01011278001 Vitis vinifera
GSVIVG01033826001 Vitis vinifera
HanXRQChr02g0051411 Helianthus annuus
HanXRQChr06g0183271 Helianthus annuus
HanXRQChr13g0402021 Helianthus annuus
Haze_02515 Corylus avellana
Haze_05346 Corylus avellana
Haze_19591 Corylus avellana
Hma1.2p1_0084F.1_g043630 Hydrangea macrophylla
Hma1.2p1_0232F.1_g097830 Hydrangea macrophylla
Hma1.2p1_0356F.1_g134050 Hydrangea macrophylla
HPP92_000004 Vanilla planifolia
HPP92_000039 Vanilla planifolia
HPP92_012635 Vanilla planifolia
Lalb_Chr02g0154991 Lupinus albus
Lalb_Chr20g0111941 Lupinus albus
Lalb_Chr21g0315791 Lupinus albus
Lalb_Chr25g0288531 Lupinus albus
Lj1g0000501 Lotus japonicus
Lj5g0024704 Lotus japonicus
Lsat_1_v5_gn_2_24580 Lactuca sativa
Lsat_1_v5_gn_6_24141 Lactuca sativa
Manes.08G024100 Manihot esculenta
Manes.09G056502 Manihot esculenta
Manes.10G058400 Manihot esculenta
MBI01_g47405_MAGBIO Magnolia biondii
MD12G1023500 Malus domestica
MD14G1020700 Malus domestica
Medtr1g060310 Medicago truncatula
Medtr2g039220 Medicago truncatula
Medtr2g439220 Medicago truncatula
Medtr2g439240 Medicago truncatula
Medtr7g029195 Medicago truncatula
Medtr7g104410 Medicago truncatula
MELO3C009461.2 Cucumis melo
Migut.J01052 Erythranthe guttata
Migut.L01772 Erythranthe guttata
MSTRG.5836 Avicennia marina
Nitab4.5_0001437g0150 Nicotiana tabacum
Nitab4.5_0001725g0010 Nicotiana tabacum
Nitab4.5_0002400g0080 Nicotiana tabacum
Nitab4.5_0003774g0050 Nicotiana tabacum
Nn2g14121 Nelumbo nucifera
Nn6g34941 Nelumbo nucifera
Oeu009227.1 Olea europaea
Oeu061778.1 Olea europaea
Os02g0530500 Oryza sativa ssp. japonica
Os04g0411200 Oryza sativa ssp. japonica
Os12g0151600 Oryza sativa ssp. japonica
Peaxi162Scf00040g10112 Petunia axillaris
Peaxi162Scf00173g00054 Petunia axillaris
PGR004G2902 Punica granatum
PGR142G3916 Punica granatum
PGSC0003DMG400002695 Solanum tuberosum
Phvul.007G229000 Phaseolus vulgaris
Potri.006G083201 Populus trichocarpa
Potri.008G021766 Populus trichocarpa
Potri.010G237600 Populus trichocarpa
Prupe.2G079600 Prunus persica
Prupe.7G113000 Prunus persica
Psat3g033920 Pisum sativum
Psat6g080880 Pisum sativum
PSO384G1242 Papaver somniferum
QL07p039321 Quercus lobata
RcHm_v2.0_Chr3g0472971 Rosa chinensis
Rhsim03G0076500 Rhododendron simsii
SalBow3G2714 Salvia bowleyana
SalBow6G4739 Salvia bowleyana
Sc20g0006220 Simmondsia chinensis
Sed0007233 Sechium edule
Sed0011638 Sechium edule
SHI23956 Sapria himalayana
Solyc09g009620.1 Solanum lycopersicum
Solyc11g007100.1 Solanum lycopersicum
Sopen09g004380 Solanum pennellii
Sopen11g003020 Solanum pennellii
Sp4g18540 Schrenkiella parvula
Sp5g09560 Schrenkiella parvula
TAR623G1482 Trochodendron aralioides
TAR633G1257 Trochodendron aralioides
TAR636G1359 Trochodendron aralioides
THA.LOC109116419 Tarenaya hassleriana
Thecc.05G086800 Theobroma cacao
Thecc.10G106800 Theobroma cacao
Thhalv10011130m.g Eutrema salsugineum
Thhalv10017499m.g Eutrema salsugineum
TPR.G19518 Trifolium pratense
TPR.G19520 Trifolium pratense
TPR.G31117 Trifolium pratense
TWI74G1584 Tripterygium wilfordii
unitig_27.g25402 Utricularia gibba
unitig_30.g34057 Utricularia gibba
unitig_744.g24695 Utricularia gibba
unitig_749.g14295 Utricularia gibba
Zm00001eb084040 Zea mays
Zm00001eb242710 Zea mays
Zm00001eb421890 Zea mays

User provided reference genes

Program Settings