Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21470 Brassica napus
A07p14870 Brassica napus
A08p28730 Brassica napus
A09p42810 Brassica napus
Aa31LG4G7770 Aethionema arabicum
Aa31LG6G9160 Aethionema arabicum
Aa31LG7G5900 Aethionema arabicum
Actinidia02609 Actinidia chinensis
Actinidia23067 Actinidia chinensis
Actinidia29456 Actinidia chinensis
Ah.16g110060 Amaranthus hybridus
AL1G35120 Arabidopsis lyrata
AL1G35240 Arabidopsis lyrata
AL1G51230 Arabidopsis lyrata
AL2G37860 Arabidopsis lyrata
Aqoxy6G00175 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2A8LJJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4JJ535 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92CKA2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.93615D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EP6Q0T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PN7YYE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UWNN8R Arachis hypogaea
AT1G21920 Arabidopsis thaliana
AT1G77660 Arabidopsis thaliana
Atru.chr13.1413 Acer truncatum
AUR62004722 Chenopodium quinoa
AUR62023641 Chenopodium quinoa
BcaB03g11886 Brassica carinata
BcaB03g14248 Brassica carinata
BcaB03g15937 Brassica carinata
BcaB05g25065 Brassica carinata
BcaB07g32189 Brassica carinata
BcaC03g15757 Brassica carinata
BcaC05g26117 Brassica carinata
BcaC06g34915 Brassica carinata
BcaC07g39129 Brassica carinata
BcaC07g42580 Brassica carinata
BcaC08g47598 Brassica carinata
BcaNung06769 Brassica carinata
BolC2t09511H Brassica oleracea
BolC5t30793H Brassica oleracea
BolC6t40185H Brassica oleracea
BolC6t40188H Brassica oleracea
BolC7t42714H Brassica oleracea
BolC8t49760H Brassica oleracea
BraA02t07170Z Brassica rapa
BraA07t29229Z Brassica rapa
BraA08t34803Z Brassica rapa
BraA09t39756Z Brassica rapa
C02p34950 Brassica napus
C05p20970 Brassica napus
C06p51660 Brassica napus
C07p21830 Brassica napus
C08p21190 Brassica napus
CAN.G1396.6 Capsicum annuum
CAN.G513.4 Capsicum annuum
CANSAT25G2477 Cannabis sativa
CARHR022270 Cardamine hirsuta
CARHR071160 Cardamine hirsuta
Carub.0001s2139 Capsella rubella
Carub.0002s2454 Capsella rubella
Ca_10563_v3 Cicer arietinum L.
Ca_13580_v3 Cicer arietinum L.
Cc10_g10980 Coffea canephora
CDE05G0806 Ceratophyllum demersum
CDE05G3506 Ceratophyllum demersum
Cfa015992 Carpinus fangiana
Ciclev10001096m.g Citrus clementina
CiPaw.05G224100 Carya illinoinensis
CiPaw.06G027300 Carya illinoinensis
ClCG08G005420 Citrullus lanatus
ClCG11G015620 Citrullus lanatus
COL.COLO4_12199 Corchorus olitorius
Cpa.g.sc36.34 Carica papaya
CsaV3_4G028400 Cucumis sativus L.
CsaV3_6G003600 Cucumis sativus L.
CSS0003863 Camellia sinensis var. sinensis
CSS0003929 Camellia sinensis var. sinensis
CSS0028880 Camellia sinensis var. sinensis
DCAR_014104 Daucus carota
DCAR_017396 Daucus carota
Dinv27338 Davidia involucrata
Dinv40396 Davidia involucrata
Duzib041G0514 Durio zibethinus
Duzib093G1970 Durio zibethinus
EL10Ac1g00009 Beta vulgaris
Eucgr.F03771 Eucalyptus grandis
FAN15G1710 Fragaria x ananassa
FAN20G0128 Fragaria x ananassa
FAN24G3078 Fragaria x ananassa
FAN27G3075 Fragaria x ananassa
FvH4_2g26570 Fragaria vesca
Glyma.04G251700 Glycine max
Glyma.06G111100 Glycine max
Glyma.14G147000 Glycine max
Gohir.A05G233600 Gossypium hirsutum
Gohir.A06G042700 Gossypium hirsutum
Gohir.D05G236000 Gossypium hirsutum
Gohir.D06G043600 Gossypium hirsutum
Gorai.009G244300 Gossypium raimondii
Gorai.010G048700 Gossypium raimondii
GSVIVG01008898001 Vitis vinifera
Haze_00474 Corylus avellana
HPP92_002177 Vanilla planifolia
HPP92_002223 Vanilla planifolia
HPP92_002224 Vanilla planifolia
HPP92_013329 Vanilla planifolia
HPP92_027208 Vanilla planifolia
Hund16844 Selenicereus undatus
Hund27038 Selenicereus undatus
Lalb_Chr00c21g0406201 Lupinus albus
Lalb_Chr04g0253371 Lupinus albus
Lalb_Chr08g0241541 Lupinus albus
Lalb_Chr11g0065791 Lupinus albus
Lalb_Chr17g0343861 Lupinus albus
Lj1g0023829 Lotus japonicus
Lj1g0025637 Lotus japonicus
Lj4A620T13 Lonicera japonica
Lj7A337G22 Lonicera japonica
Manes.02G161300 Manihot esculenta
Manes.18G075500 Manihot esculenta
MBI03_g33018_MAGBIO Magnolia biondii
MBI06_g44270_MAGBIO Magnolia biondii
MD08G1166700 Malus domestica
MD15G1352900 Malus domestica
Medtr3g072650 Medicago truncatula
Medtr5g058920 Medicago truncatula
MELO3C010462.2 Cucumis melo
MELO3C011588.2 Cucumis melo
Migut.C01147 Erythranthe guttata
Migut.N03296 Erythranthe guttata
MSTRG.1458 Avicennia marina
MSTRG.22417 Avicennia marina
MSTRG.24156 Avicennia marina
Nitab4.5_0000633g0150 Nicotiana tabacum
Nitab4.5_0001035g0050 Nicotiana tabacum
Nitab4.5_0001926g0040 Nicotiana tabacum
Nitab4.5_0008211g0010 Nicotiana tabacum
Nn5g28190 Nelumbo nucifera
Oeu017281.1 Olea europaea
Oeu026140.1 Olea europaea
Oeu026141.1 Olea europaea
Oeu040429.1 Olea europaea
Os08g0469700 Oryza sativa ssp. japonica
Os09g0453900 Oryza sativa ssp. japonica
Peaxi162Scf00051g00625 Petunia axillaris
PGR042G0694 Punica granatum
PGSC0003DMG400000917 Solanum tuberosum
PGSC0003DMG400017560 Solanum tuberosum
Phvul.009G123000 Phaseolus vulgaris
Potri.002G085900 Populus trichocarpa
Potri.005G175800 Populus trichocarpa
Prupe.1G501200 Prunus persica
Psat2g077720 Pisum sativum
Psat5g120760 Pisum sativum
PSO170G6269 Papaver somniferum
PSO782G3162 Papaver somniferum
QL09p035692 Quercus lobata
QL09p051094 Quercus lobata
RcHm_v2.0_Chr6g0295441 Rosa chinensis
RhsimUnG0094600 Rhododendron simsii
Sabra02G0067300 Salix brachista
Sabra05G0132400 Salix brachista
SalBow6G5532 Salvia bowleyana
SalBow6G6365 Salvia bowleyana
SalBow7G2783 Salvia bowleyana
Sc01g0001330 Simmondsia chinensis
Sc23g0000790 Simmondsia chinensis
Sed0001675 Sechium edule
Sed0020239 Sechium edule
SGA_v2.0_scaffold24G10475 Striga asiatica
SGA_v2.0_scaffold28G12011 Striga asiatica
SGA_v2.0_scaffold52G18980 Striga asiatica
Solyc06g060410.3 Solanum lycopersicum
Solyc11g013010.2 Solanum lycopersicum
Sopen06g020550 Solanum pennellii
Sopen11g007750 Solanum pennellii
Sp1g19460 Schrenkiella parvula
Sp5g32830 Schrenkiella parvula
SpUn0008_0010 Schrenkiella parvula
SpUn0176_0010 Schrenkiella parvula
TAR376G0801 Trochodendron aralioides
TAR381G0087 Trochodendron aralioides
TAR628G1291 Trochodendron aralioides
THA.LOC104800228 Tarenaya hassleriana
THA.LOC104809769 Tarenaya hassleriana
THA.LOC104817173 Tarenaya hassleriana
Thecc.08G121800 Theobroma cacao
Thhalv10007661m.g Eutrema salsugineum
Thhalv10018575m.g Eutrema salsugineum
TPR.G22989 Trifolium pratense
TPR.G31631 Trifolium pratense
TWI12G1480 Tripterygium wilfordii
TWI36G0704 Tripterygium wilfordii
TWI56G0133 Tripterygium wilfordii
unitig_0.g2122 Utricularia gibba
unitig_747.g21489 Utricularia gibba
vmacro00817 Vaccinium macrocarpon
VMungo1309G0116 Vigna mungo
VMungo1309G0359 Vigna mungo
Zm00001eb037930 Zea mays
Zm00001eb100460 Zea mays
Zm00001eb176590 Zea mays

User provided reference genes

Program Settings