Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p36470 Brassica napus
Aa31LG11G4920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1098 Anthoceros agrestis
Actinidia29853 Actinidia chinensis
Actinidia38037 Actinidia chinensis
Actinidia38038 Actinidia chinensis
Actinidia38039 Actinidia chinensis
Ah.13g075160 Amaranthus hybridus
AL6G37830 Arabidopsis lyrata
AL6G37840 Arabidopsis lyrata
Aqoxy6G00921 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F136KG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P3G561 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TMG43S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XPY7J2 Arachis hypogaea
AT5G25900 Arabidopsis thaliana
ATR0297G001 Amborella trichopoda
ATR0705G191 Amborella trichopoda
ATR0789G099 Amborella trichopoda
ATR0799G001 Amborella trichopoda
ATR1144G001 Amborella trichopoda
Atru.chr13.598 Acer truncatum
AUR62035325 Chenopodium quinoa
AUR62035923 Chenopodium quinoa
BolC7t44733H Brassica oleracea
BraA06t26570Z Brassica rapa
C07p42020 Brassica napus
CAN.G371.84 Capsicum annuum
CANSAT11G0813 Cannabis sativa
CARHR187520 Cardamine hirsuta
Carub.0006s2365 Capsella rubella
Ca_01007_v3 Cicer arietinum L.
Cc00_g28260 Coffea canephora
Cc10_g03710 Coffea canephora
CDE07G0336 Ceratophyllum demersum
CDE07G0863 Ceratophyllum demersum
Cfa018486 Carpinus fangiana
Ciclev10000884m.g Citrus clementina
Ciclev10000902m.g Citrus clementina
Ciclev10001179m.g Citrus clementina
CiPaw.16G051300 Carya illinoinensis
ClCG05G019490 Citrullus lanatus
Cpa.g.sc357.4 Carica papaya
Cpa.g.sc357.5 Carica papaya
Cpa.g.sc357.6 Carica papaya
CsaV3_4G033930 Cucumis sativus L.
CSS0008797 Camellia sinensis var. sinensis
CSS0041517 Camellia sinensis var. sinensis
DCAR_019485 Daucus carota
DCAR_019486 Daucus carota
DCAR_019489 Daucus carota
DCAR_020942 Daucus carota
DCAR_020943 Daucus carota
Dinv36012 Davidia involucrata
Dinv39355 Davidia involucrata
Duzib093G0466 Durio zibethinus
ECA232G1737 Erigeron canadensis
ECA232G2773 Erigeron canadensis
ECA232G3746 Erigeron canadensis
ECA246G2720 Erigeron canadensis
EL10Ac3g06760 Beta vulgaris
Eucgr.F02396 Eucalyptus grandis
Eucgr.F02398 Eucalyptus grandis
FAN15G1250 Fragaria x ananassa
FAN15G3076 Fragaria x ananassa
FAN20G2375 Fragaria x ananassa
FAN27G3412 Fragaria x ananassa
FvH4_2g22670 Fragaria vesca
FvH4_2g40650 Fragaria vesca
Glyma.13G371400 Glycine max
Glyma.15G002200 Glycine max
Gohir.A05G199066 Gossypium hirsutum
Gohir.A06G015200 Gossypium hirsutum
Gohir.D05G201760 Gossypium hirsutum
Gohir.D06G013300 Gossypium hirsutum
Gorai.009G207500 Gossypium raimondii
Gorai.010G015900 Gossypium raimondii
GSVIVG01009583001 Vitis vinifera
HanXRQChr09g0268311 Helianthus annuus
HanXRQChr09g0268801 Helianthus annuus
HanXRQChr09g0268821 Helianthus annuus
HanXRQChr13g0416911 Helianthus annuus
HanXRQChr13g0416921 Helianthus annuus
Haze_17587 Corylus avellana
Hma1.2p1_0023F.1_g015320 Hydrangea macrophylla
Hma1.2p1_0023F.1_g015330 Hydrangea macrophylla
Hma1.2p1_0260F.1_g104540 Hydrangea macrophylla
HPP92_007630 Vanilla planifolia
HPP92_007661 Vanilla planifolia
Hund26610 Selenicereus undatus
Hund26611 Selenicereus undatus
Lalb_Chr01g0011861 Lupinus albus
Lalb_Chr24g0392801 Lupinus albus
Lj3g0015404 Lotus japonicus
Lj3g0017085 Lotus japonicus
Lj3g0020783 Lotus japonicus
Lj3g0023986 Lotus japonicus
Lj4A48T66 Lonicera japonica
Lj4A778G47 Lonicera japonica
Lj4C778G9 Lonicera japonica
Lsat_1_v5_gn_4_123261 Lactuca sativa
Lsat_1_v5_gn_4_123301 Lactuca sativa
Lsat_1_v5_gn_6_114080 Lactuca sativa
Manes.05G169000 Manihot esculenta
Mapoly0130s0003 Marchantia polymorpha
Mapoly0140s0010 Marchantia polymorpha
MD08G1039800 Malus domestica
MD08G1040000 Malus domestica
MD15G1034400 Malus domestica
MD15G1034700 Malus domestica
Medtr2g105360 Medicago truncatula
MELO3C016719.2 Cucumis melo
Migut.C00648 Erythranthe guttata
MSTRG.1318 Avicennia marina
MSTRG.22277 Avicennia marina
Nitab4.5_0000068g0130 Nicotiana tabacum
Nitab4.5_0002280g0060 Nicotiana tabacum
Nn1g02637 Nelumbo nucifera
Nn1g02638 Nelumbo nucifera
Nn1g02640 Nelumbo nucifera
Nn5g29392 Nelumbo nucifera
Nn5g31407 Nelumbo nucifera
Oeu020248.1 Olea europaea
Oeu028454.1 Olea europaea
Oeu047910.1 Olea europaea
Os06g0568600 Oryza sativa ssp. japonica
Os06g0569500 Oryza sativa ssp. japonica
Os06g0569900 Oryza sativa ssp. japonica
Os06g0570100 Oryza sativa ssp. japonica
Os06g0570566 Oryza sativa ssp. japonica
Os06g0570600 Oryza sativa ssp. japonica
Peaxi162Scf01514g00021 Petunia axillaris
PGR031G3781 Punica granatum
PGSC0003DMG401011679 Solanum tuberosum
PGSC0003DMG402011679 Solanum tuberosum
Phvul.005G183600 Phaseolus vulgaris
Potri.002G129700 Populus trichocarpa
Pp3c20_800 Physcomitrium patens
Pp3c20_830 Physcomitrium patens
Prupe.1G388500 Prunus persica
Psat5g308280 Pisum sativum
PSO063G6925 Papaver somniferum
PSO541G3721 Papaver somniferum
PSO675G4484 Papaver somniferum
PSO675G7937 Papaver somniferum
PSO717G0014 Papaver somniferum
PSO732G0590 Papaver somniferum
QL02p006388 Quercus lobata
QL02p006420 Quercus lobata
RcHm_v2.0_Chr6g0299941 Rosa chinensis
RcHm_v2.0_Chr6g0299961 Rosa chinensis
RcHm_v2.0_Chr6g0300021 Rosa chinensis
Rhsim07G0233700 Rhododendron simsii
Rhsim07G0233800 Rhododendron simsii
Rhsim07G0233900 Rhododendron simsii
Rhsim07G0234000 Rhododendron simsii
Sabra02G0101700 Salix brachista
SalBow4G0688 Salvia bowleyana
SalBow4G3256 Salvia bowleyana
SalBow6G0672 Salvia bowleyana
SalBow6G1166 Salvia bowleyana
SalBow6G3262 Salvia bowleyana
SalBow6G3480 Salvia bowleyana
SalBow6G4572 Salvia bowleyana
SalBow6G5930 Salvia bowleyana
SalBow7G3683 Salvia bowleyana
Sc15g0006540 Simmondsia chinensis
Sed0002142 Sechium edule
Sed0020084 Sechium edule
SEGI_01515 Sequoiadendron giganteum
SEGI_03899 Sequoiadendron giganteum
SEGI_06034 Sequoiadendron giganteum
SEGI_07102 Sequoiadendron giganteum
SEGI_25804 Sequoiadendron giganteum
SEGI_26040 Sequoiadendron giganteum
SEGI_36411 Sequoiadendron giganteum
SEGI_37043 Sequoiadendron giganteum
SEGI_40109 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07017 Striga asiatica
SGA_v2.0_scaffold14G07022 Striga asiatica
SGA_v2.0_scaffold14G07023 Striga asiatica
SGA_v2.0_scaffold28G11770 Striga asiatica
SMO239G0126 Selaginella moellendorffii
SMO307G0003 Selaginella moellendorffii
SMO367G0231 Selaginella moellendorffii
Solyc04g083160.2 Solanum lycopersicum
Sopen04g033160 Solanum pennellii
Sp2g21750 Schrenkiella parvula
TAR381G0743 Trochodendron aralioides
THA.LOC104803409 Tarenaya hassleriana
THA.LOC104806957 Tarenaya hassleriana
Thecc.08G016300 Theobroma cacao
Thhalv10004043m.g Eutrema salsugineum
TPR.G35981 Trifolium pratense
TWI56G0292 Tripterygium wilfordii
unitig_26.g9823 Utricularia gibba
unitig_26.g9824 Utricularia gibba
vmacro04475 Vaccinium macrocarpon
vmacro04476 Vaccinium macrocarpon
vmacro04477 Vaccinium macrocarpon
vmacro04478 Vaccinium macrocarpon
VMungo0647G2265 Vigna mungo
Zm00001eb385070 Zea mays
Zm00001eb385100 Zea mays

User provided reference genes

Program Settings