Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p24120 Brassica napus
A03p32150 Brassica napus
A10p00320 Brassica napus
Aa31LG1G11070 Aethionema arabicum
Aa31LG5G460 Aethionema arabicum
Aa31LG5G470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1010 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.998 Anthoceros agrestis
Actinidia33422 Actinidia chinensis
Ah.05g180660 Amaranthus hybridus
AL1G10210 Arabidopsis lyrata
AL1G10650 Arabidopsis lyrata
AL6G52960 Arabidopsis lyrata
Aqoxy7G00326 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6AK6JC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.74NP28 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.74QZJ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI504D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KB1I4I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KX913X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QL50AS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UANN5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZVY5TW Arachis hypogaea
AT1G01710 Arabidopsis thaliana
AT4G00520 Arabidopsis thaliana
ATR0680G356 Amborella trichopoda
Atru.chr5.459 Acer truncatum
AUR62004348 Chenopodium quinoa
AUR62022554 Chenopodium quinoa
BcaB01g02157 Brassica carinata
BcaB01g02160 Brassica carinata
BcaB01g02197 Brassica carinata
BcaB03g13607 Brassica carinata
BcaC01g06871 Brassica carinata
BcaC03g16040 Brassica carinata
BcaC04g24162 Brassica carinata
BcaNung05354 Brassica carinata
BolC2t09816H Brassica oleracea
BolC3t16188H Brassica oleracea
BolC5t28825H Brassica oleracea
BraA02t07405Z Brassica rapa
BraA03t12385Z Brassica rapa
BraA10t42310Z Brassica rapa
C02p38000 Brassica napus
C03p39170 Brassica napus
C05p00330 Brassica napus
CAN.G78.57 Capsicum annuum
CAN.G78.58 Capsicum annuum
CAN.G78.59 Capsicum annuum
CANSAT56G4221 Cannabis sativa
CARHR000630 Cardamine hirsuta
CARHR248670 Cardamine hirsuta
Carub.0001s0050 Capsella rubella
Carub.0006s3675 Capsella rubella
Ca_07910_v3 Cicer arietinum L.
Ca_23637_v3 Cicer arietinum L.
Ca_27001_v3 Cicer arietinum L.
Cc02_g37920 Coffea canephora
CDE11G0862 Ceratophyllum demersum
Cfa022652 Carpinus fangiana
Ciclev10020242m.g Citrus clementina
CiPaw.01G060400 Carya illinoinensis
CiPaw.01G060500 Carya illinoinensis
CiPaw.01G060600 Carya illinoinensis
ClCG05G001560 Citrullus lanatus
COL.COLO4_12706 Corchorus olitorius
Cpa.g.sc18.250 Carica papaya
CsaV3_3G008950 Cucumis sativus L.
CSS0020727 Camellia sinensis var. sinensis
DCAR_006927 Daucus carota
DCAR_015970 Daucus carota
DCAR_025188 Daucus carota
Dinv43809 Davidia involucrata
Duzib133G0362 Durio zibethinus
Duzib138G1725 Durio zibethinus
ECA236G4888 Erigeron canadensis
EL10Ac1g00424 Beta vulgaris
Eucgr.E00141 Eucalyptus grandis
FAN01G2146 Fragaria x ananassa
FAN06G3044 Fragaria x ananassa
FAN06G4684 Fragaria x ananassa
FAN10G4309 Fragaria x ananassa
FvH4_7g14192 Fragaria vesca
Glyma.03G009800 Glycine max
Glyma.07G071300 Glycine max
Glyma.09G260200 Glycine max
Glyma.18G232000 Glycine max
Glyma.18G232100 Glycine max
Glyma.18G232200 Glycine max
Glyma.18G232300 Glycine max
Gohir.A11G088400 Gossypium hirsutum
Gohir.D11G092700 Gossypium hirsutum
Gorai.007G099000 Gossypium raimondii
GSVIVG01026913001 Vitis vinifera
HanXRQChr04g0103041 Helianthus annuus
HanXRQChr04g0121471 Helianthus annuus
HanXRQChr04g0121591 Helianthus annuus
HanXRQChr04g0121601 Helianthus annuus
HanXRQChr06g0170071 Helianthus annuus
HanXRQChr06g0170081 Helianthus annuus
Haze_15492 Corylus avellana
Haze_15493 Corylus avellana
HPP92_008506 Vanilla planifolia
Hund16926 Selenicereus undatus
Hund27282 Selenicereus undatus
Hund27283 Selenicereus undatus
Lalb_Chr17g0339681 Lupinus albus
Lalb_Chr19g0126941 Lupinus albus
Lalb_Chr19g0126951 Lupinus albus
Lj1g0000541 Lotus japonicus
Lj3g0018331 Lotus japonicus
Lj7A514T27 Lonicera japonica
Lj7A514T28 Lonicera japonica
Lj9A583T62 Lonicera japonica
Lsat_1_v5_gn_7_4420 Lactuca sativa
Lsat_1_v5_gn_7_4460 Lactuca sativa
Manes.01G257800 Manihot esculenta
Manes.05G035200 Manihot esculenta
Mapoly0016s0008 Marchantia polymorpha
MD01G1058300 Malus domestica
MD01G1058500 Malus domestica
MD01G1058600 Malus domestica
MD01G1058800 Malus domestica
MD01G1058900 Malus domestica
MD01G1059000 Malus domestica
MD01G1059100 Malus domestica
Medtr7g077400 Medicago truncatula
Medtr8g030920 Medicago truncatula
MELO3C006113.2 Cucumis melo
Migut.N01442 Erythranthe guttata
MSTRG.4857 Avicennia marina
Nitab4.5_0005277g0030 Nicotiana tabacum
Nitab4.5_0008002g0030 Nicotiana tabacum
Nn6g33439 Nelumbo nucifera
Oeu037304.1 Olea europaea
Oeu037305.1 Olea europaea
Os04g0558400 Oryza sativa ssp. japonica
Peaxi162Scf00020g00237 Petunia axillaris
PGSC0003DMG400000037 Solanum tuberosum
PGSC0003DMG400000166 Solanum tuberosum
PGSC0003DMG400000200 Solanum tuberosum
Phvul.008G065700 Phaseolus vulgaris
Phvul.010G098200 Phaseolus vulgaris
Potri.002G159150 Populus trichocarpa
Potri.014G083300 Populus trichocarpa
Pp3c10_19190 Physcomitrium patens
Pp3c12_25760 Physcomitrium patens
Pp3c14_7450 Physcomitrium patens
PRCOL_00006030 Prasinoderma coloniale
Prupe.2G169700 Prunus persica
Psat0s3577g0040 Pisum sativum
Psat0s3577g0120 Pisum sativum
Psat0s3577g0160 Pisum sativum
Psat0s3832g0040 Pisum sativum
Psat0s3832g0080 Pisum sativum
Psat4g154520 Pisum sativum
PSO063G6511 Papaver somniferum
PSO478G2412 Papaver somniferum
PSO478G3804 Papaver somniferum
PSO478G5134 Papaver somniferum
PSO782G0254 Papaver somniferum
PSO782G2636 Papaver somniferum
PSO782G5283 Papaver somniferum
QL05p057193 Quercus lobata
QL08p048955 Quercus lobata
QL08p048969 Quercus lobata
QL08p048978 Quercus lobata
QL08p048991 Quercus lobata
RcHm_v2.0_Chr1g0355121 Rosa chinensis
Rhsim13G0014400 Rhododendron simsii
Sabra14G0060600 Salix brachista
SalBow5G0930 Salvia bowleyana
SalBow5G3927 Salvia bowleyana
Sc23g0002940 Simmondsia chinensis
Sed0019127 Sechium edule
Sed0024794 Sechium edule
SEGI_17243 Sequoiadendron giganteum
SEGI_22600 Sequoiadendron giganteum
SGA_v2.0_scaffold43G16419 Striga asiatica
SHI13440 Sapria himalayana
SMO147G0196 Selaginella moellendorffii
SMO147G0373 Selaginella moellendorffii
SMO147G0381 Selaginella moellendorffii
SMO273G0019 Selaginella moellendorffii
Solyc01g094530.4 Solanum lycopersicum
Solyc01g094550.3 Solanum lycopersicum
Sopen01g038340 Solanum pennellii
Sopen01g038360 Solanum pennellii
Sp1g00600 Schrenkiella parvula
Sp6g00550 Schrenkiella parvula
TAR374G1710 Trochodendron aralioides
THA.LOC104814102 Tarenaya hassleriana
Thecc.01G360000 Theobroma cacao
Thhalv10007689m.g Eutrema salsugineum
Thhalv10029128m.g Eutrema salsugineum
TPR.G14856 Trifolium pratense
TPR.G15034 Trifolium pratense
TPR.G37800 Trifolium pratense
TPR.G40156 Trifolium pratense
TWI59G0062 Tripterygium wilfordii
unitig_22.g6719 Utricularia gibba
vmacro23203 Vaccinium macrocarpon
VMungo0331G1844 Vigna mungo
Zm00001eb429310 Zea mays

User provided reference genes

Program Settings