Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11620 Brassica napus
A08p14120 Brassica napus
Aa31LG3G9020 Aethionema arabicum
Aa31LG6G1780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.860 Anthoceros agrestis
Actinidia01270 Actinidia chinensis
Ah.07g206510 Amaranthus hybridus
Ah.10g037700 Amaranthus hybridus
AL7G34990 Arabidopsis lyrata
AL8G27210 Arabidopsis lyrata
Aqoxy3G02000 Aquilegia oxysepala
Aqoxy4G00165 Aquilegia oxysepala
Aqoxy5G04073 Aquilegia oxysepala
Aqoxy5G04074 Aquilegia oxysepala
Aqoxy66s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G8Q6Z7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGR1ZK Arachis hypogaea
AT4G19100 Arabidopsis thaliana
AT5G52780 Arabidopsis thaliana
ATR0582G091 Amborella trichopoda
ATR0829G128 Amborella trichopoda
Atru.chr1.345 Acer truncatum
Atru.chr6.1483 Acer truncatum
AUR62021112 Chenopodium quinoa
AUR62031429 Chenopodium quinoa
BcaB04g18520 Brassica carinata
BcaB05g21980 Brassica carinata
BcaC01g00589 Brassica carinata
BcaC03g14501 Brassica carinata
BolC2t08075H Brassica oleracea
BolC3t20441H Brassica oleracea
BraA02t06225Z Brassica rapa
BraA08t33406Z Brassica rapa
C02p19390 Brassica napus
C03p81700 Brassica napus
CAN.G126.33 Capsicum annuum
CAN.G947.40 Capsicum annuum
CANSAT25G0511 Cannabis sativa
CANSAT64G0423 Cannabis sativa
CARHR225980 Cardamine hirsuta
CARHR265730 Cardamine hirsuta
Carub.0007s2206 Capsella rubella
Carub.0008s1294 Capsella rubella
CBR_g8730 Chara braunii
Cc02_g02310 Coffea canephora
Cc08_g05240 Coffea canephora
CDE11G0413 Ceratophyllum demersum
CDE12G0118 Ceratophyllum demersum
Cfa018689 Carpinus fangiana
Ciclev10002455m.g Citrus clementina
Ciclev10006017m.g Citrus clementina
CiPaw.06G003800 Carya illinoinensis
CiPaw.12G071300 Carya illinoinensis
ClCG05G008430 Citrullus lanatus
ClCG10G001090 Citrullus lanatus
Cpa.g.sc107.118 Carica papaya
Cpa.g.sc24.23 Carica papaya
Cre07.g329000 Chlamydomonas reinhardtii
CsaV3_2G013300 Cucumis sativus L.
CsaV3_3G001110 Cucumis sativus L.
CsaV3_7G028240 Cucumis sativus L.
CSS0009353 Camellia sinensis var. sinensis
CSS0026752 Camellia sinensis var. sinensis
CSS0030393 Camellia sinensis var. sinensis
CSS0035284 Camellia sinensis var. sinensis
DCAR_016562 Daucus carota
Dinv35260 Davidia involucrata
Duzib084G1422 Durio zibethinus
Duzib205G0845 Durio zibethinus
Duzib205G1896 Durio zibethinus
ECA246G3095 Erigeron canadensis
EL10Ac2g04538 Beta vulgaris
EL10Ac3g05410 Beta vulgaris
Eucgr.A02724 Eucalyptus grandis
Eucgr.A02725 Eucalyptus grandis
Eucgr.D02600 Eucalyptus grandis
FAN01G0289 Fragaria x ananassa
FAN03G1557 Fragaria x ananassa
FAN03G2410 Fragaria x ananassa
FAN04G2569 Fragaria x ananassa
FAN06G2350 Fragaria x ananassa
FAN06G4291 Fragaria x ananassa
FAN08G2084 Fragaria x ananassa
FAN10G1033 Fragaria x ananassa
FAN10G2497 Fragaria x ananassa
FAN13G2864 Fragaria x ananassa
FAN18G0357 Fragaria x ananassa
FAN18G2092 Fragaria x ananassa
FvH4_5g23870 Fragaria vesca
FvH4_7g30320 Fragaria vesca
Glyma.01G148800 Glycine max
Glyma.09G144551 Glycine max
Glyma.09G212600 Glycine max
Glyma.16G177800 Glycine max
Gohir.A06G015800 Gossypium hirsutum
Gohir.A06G015850 Gossypium hirsutum
Gohir.A08G150500 Gossypium hirsutum
Gohir.D06G013800 Gossypium hirsutum
Gohir.D06G014000 Gossypium hirsutum
Gohir.D08G171600 Gossypium hirsutum
Gorai.004G178900 Gossypium raimondii
Gorai.010G016400 Gossypium raimondii
Gorai.010G016500 Gossypium raimondii
GSVIVG01018633001 Vitis vinifera
GSVIVG01028843001 Vitis vinifera
HanXRQChr15g0494141 Helianthus annuus
HanXRQChr17g0539321 Helianthus annuus
Haze_07073 Corylus avellana
Haze_16128 Corylus avellana
Hma1.2p1_0274F.1_g110050 Hydrangea macrophylla
Hma1.2p1_0560F.1_g178720 Hydrangea macrophylla
Hma1.2p1_0784F.1_g217065 Hydrangea macrophylla
HPP92_024513 Vanilla planifolia
Lalb_Chr03g0034941 Lupinus albus
Lalb_Chr05g0215471 Lupinus albus
Lalb_Chr16g0380801 Lupinus albus
Lj1P1006T28 Lonicera japonica
Lj2g0011165 Lotus japonicus
Lj2g0012173 Lotus japonicus
Lj7P145T38 Lonicera japonica
Lsat_1_v5_gn_3_28081 Lactuca sativa
Manes.14G021700 Manihot esculenta
Manes.15G187200 Manihot esculenta
Mapoly0029s0024 Marchantia polymorpha
MBI04_g15070_MAGBIO Magnolia biondii
MCO10G295 Micromonas commoda
MD01G1209300 Malus domestica
MD06G1014500 Malus domestica
MD07G1279500 Malus domestica
Medtr5g027010 Medicago truncatula
Medtr6g051780 Medicago truncatula
MELO3C006958.2 Cucumis melo
MELO3C013801.2 Cucumis melo
Migut.A00549 Erythranthe guttata
Migut.F00283 Erythranthe guttata
MSTRG.25722 Avicennia marina
Nitab4.5_0002637g0020 Nicotiana tabacum
Nitab4.5_0006014g0070 Nicotiana tabacum
Nn1g01667 Nelumbo nucifera
Nn3g19243 Nelumbo nucifera
Oeu007806.1 Olea europaea
Oeu061665.1 Olea europaea
Os06g0319800 Oryza sativa ssp. japonica
Os10g0533100 Oryza sativa ssp. japonica
Peaxi162Scf00444g00223 Petunia axillaris
Peaxi162Scf00876g00412 Petunia axillaris
PGR031G3038 Punica granatum
PGR042G0026 Punica granatum
PGSC0003DMG400009497 Solanum tuberosum
PGSC0003DMG400029432 Solanum tuberosum
Phvul.002G131600 Phaseolus vulgaris
Phvul.004G106700 Phaseolus vulgaris
Potri.001G132001 Populus trichocarpa
Potri.004G072900 Populus trichocarpa
Pp3c21_19650 Physcomitrium patens
PRCOL_00000813 Prasinoderma coloniale
Prupe.2G301700 Prunus persica
Prupe.5G021700 Prunus persica
Psat2g141680 Pisum sativum
Psat3g171080 Pisum sativum
PSO063G3994 Papaver somniferum
PSO210G7576 Papaver somniferum
PSO782G2648 Papaver somniferum
PSO832G0866 Papaver somniferum
QL09p012629 Quercus lobata
QL12p000867 Quercus lobata
RcHm_v2.0_Chr1g0378471 Rosa chinensis
RcHm_v2.0_Chr7g0213261 Rosa chinensis
Rhsim03G0191800 Rhododendron simsii
Sabra01G0101800 Salix brachista
Sabra04G0047900 Salix brachista
SalBow4G1591 Salvia bowleyana
Sc07g0008380 Simmondsia chinensis
Sed0009193 Sechium edule
Sed0011954 Sechium edule
SEGI_40194 Sequoiadendron giganteum
SEGI_40625 Sequoiadendron giganteum
SGA_v2.0_scaffold89G27413 Striga asiatica
Solyc03g007860.1 Solanum lycopersicum
Solyc12g096100.2 Solanum lycopersicum
Sopen03g003800 Solanum pennellii
Sp6g14920 Schrenkiella parvula
Sp7g17800 Schrenkiella parvula
TAR374G1551 Trochodendron aralioides
TAR629G2516 Trochodendron aralioides
THA.LOC104811010 Tarenaya hassleriana
THA.LOC104811949 Tarenaya hassleriana
Thecc.03G185300 Theobroma cacao
Thecc.03G316600 Theobroma cacao
Thhalv10014707m.g Eutrema salsugineum
Thhalv10026226m.g Eutrema salsugineum
TPR.G29136 Trifolium pratense
TPR.G9170 Trifolium pratense
TWI23G1330 Tripterygium wilfordii
TWI32G1087 Tripterygium wilfordii
TWI34G1850 Tripterygium wilfordii
TWI34G1904 Tripterygium wilfordii
unitig_0.g2467 Utricularia gibba
unitig_748.g7406 Utricularia gibba
vmacro00069 Vaccinium macrocarpon
vmacro06622 Vaccinium macrocarpon
VMungo0464G0593 Vigna mungo
VMungo1215G2665 Vigna mungo
Zm00001eb021830 Zea mays
Zm00001eb403420 Zea mays

User provided reference genes

Program Settings