Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p35310 Brassica napus
Aa31LG8G1390 Aethionema arabicum
Actinidia20782 Actinidia chinensis
Actinidia20783 Actinidia chinensis
Actinidia26012 Actinidia chinensis
Ah.08g209790 Amaranthus hybridus
Ah.08g217060 Amaranthus hybridus
AL3G26370 Arabidopsis lyrata
AL3G26390 Arabidopsis lyrata
AL6G10250 Arabidopsis lyrata
Aqoxy2G00755 Aquilegia oxysepala
Aqoxy2G00756 Aquilegia oxysepala
Aqoxy2G01821 Aquilegia oxysepala
Aqoxy466s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4SYW8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8PX6PB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R859Y3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2XVT6 Arachis hypogaea
AT3G14140 Arabidopsis thaliana
AT3G14160 Arabidopsis thaliana
AT5G01780 Arabidopsis thaliana
ATR0681G237 Amborella trichopoda
Atru.chr1.4099 Acer truncatum
Atru.chr8.2366 Acer truncatum
AUR62006332 Chenopodium quinoa
AUR62026370 Chenopodium quinoa
BcaC05g29120 Brassica carinata
BolC5t34026H Brassica oleracea
BraA05t22341Z Brassica rapa
C05p53490 Brassica napus
CANSAT56G3367 Cannabis sativa
CARHR089000 Cardamine hirsuta
CARHR089020 Cardamine hirsuta
CARHR212140 Cardamine hirsuta
Carub.0003s1375 Capsella rubella
Carub.0006s0005 Capsella rubella
Ca_19529_v3 Cicer arietinum L.
CBR_g8828 Chara braunii
Cc04_g00980 Coffea canephora
Cfa003499 Carpinus fangiana
Cfa003500 Carpinus fangiana
Ciclev10012606m.g Citrus clementina
Ciclev10026191m.g Citrus clementina
Ciclev10027411m.g Citrus clementina
CiPaw.02G133500 Carya illinoinensis
CiPaw.09G217500 Carya illinoinensis
ClCG04G006530 Citrullus lanatus
ClCG07G014130 Citrullus lanatus
COL.COLO4_30813 Corchorus olitorius
COL.COLO4_36103 Corchorus olitorius
Cpa.g.sc33.100 Carica papaya
Cre09.g412350 Chlamydomonas reinhardtii
CsaV3_3G031290 Cucumis sativus L.
CsaV3_4G026990 Cucumis sativus L.
CsaV3_UNG227930 Cucumis sativus L.
CSS0017792 Camellia sinensis var. sinensis
DCAR_018657 Daucus carota
DCAR_026427 Daucus carota
DCAR_030030 Daucus carota
Dinv20404 Davidia involucrata
Dinv25297 Davidia involucrata
Duzib212G0416 Durio zibethinus
ECA236G3221 Erigeron canadensis
ECA236G3904 Erigeron canadensis
ECA248G1373 Erigeron canadensis
ECA248G2738 Erigeron canadensis
EL10Ac7g16448 Beta vulgaris
EL10Ac7g17042 Beta vulgaris
Eucgr.J02616 Eucalyptus grandis
FAN02G0703 Fragaria x ananassa
FAN02G2897 Fragaria x ananassa
FAN05G1161 Fragaria x ananassa
FAN05G3016 Fragaria x ananassa
FAN05G3049 Fragaria x ananassa
FAN09G0950 Fragaria x ananassa
FAN09G1190 Fragaria x ananassa
FAN14G0422 Fragaria x ananassa
FAN14G1485 Fragaria x ananassa
FvH4_6g10460 Fragaria vesca
FvH4_6g35240 Fragaria vesca
Glyma.01G129600 Glycine max
Glyma.19G263000 Glycine max
Glyma.20G056000 Glycine max
Gohir.A06G194000 Gossypium hirsutum
Gohir.A10G148300 Gossypium hirsutum
Gohir.D06G201800 Gossypium hirsutum
Gohir.D10G118300 Gossypium hirsutum
Gorai.010G235600 Gossypium raimondii
Gorai.011G130100 Gossypium raimondii
GSVIVG01016708001 Vitis vinifera
GSVIVG01030225001 Vitis vinifera
HanXRQChr01g0029601 Helianthus annuus
HanXRQChr04g0109961 Helianthus annuus
HanXRQChr04g0109971 Helianthus annuus
HanXRQChr04g0110031 Helianthus annuus
HanXRQChr06g0164981 Helianthus annuus
HanXRQChr06g0165001 Helianthus annuus
HanXRQChr09g0266581 Helianthus annuus
HanXRQChr09g0268341 Helianthus annuus
HanXRQChr09g0271921 Helianthus annuus
HanXRQChr09g0271941 Helianthus annuus
HanXRQChr09g0271961 Helianthus annuus
HanXRQChr09g0271981 Helianthus annuus
HanXRQChr09g0272851 Helianthus annuus
HanXRQChr09g0276501 Helianthus annuus
HanXRQChr09g0276511 Helianthus annuus
HanXRQChr09g0276521 Helianthus annuus
HanXRQChr11g0341861 Helianthus annuus
HanXRQChr16g0530091 Helianthus annuus
HanXRQChr16g0530101 Helianthus annuus
HanXRQChr16g0530111 Helianthus annuus
HanXRQChr17g0552801 Helianthus annuus
HanXRQChr17g0552811 Helianthus annuus
Haze_16082 Corylus avellana
Haze_16259 Corylus avellana
Haze_21126 Corylus avellana
Hma1.2p1_0532F.1_g173480 Hydrangea macrophylla
Hma1.2p1_1349F.1_g277370 Hydrangea macrophylla
Hma1.2p1_1514F.1_g288140 Hydrangea macrophylla
HPP92_000038 Vanilla planifolia
HPP92_012636 Vanilla planifolia
HPP92_012637 Vanilla planifolia
Hund05719 Selenicereus undatus
Hund19805 Selenicereus undatus
Lalb_Chr04g0261141 Lupinus albus
Lalb_Chr12g0207541 Lupinus albus
Lj1g0027521 Lotus japonicus
Lj2C63G5 Lonicera japonica
Lj2C63G6 Lonicera japonica
Lj3g0025566 Lotus japonicus
Lj5A32G58 Lonicera japonica
Manes.11G015800 Manihot esculenta
MBI15_g26242_MAGBIO Magnolia biondii
MBI15_g40704_MAGBIO Magnolia biondii
MCO15G667 Micromonas commoda
MD04G1170200 Malus domestica
MD09G1177300 Malus domestica
MD12G1184200 Malus domestica
Medtr4g029340 Medicago truncatula
MELO3C025799.2 Cucumis melo
MELO3C026046.2 Cucumis melo
Migut.I01109 Erythranthe guttata
Migut.J00071 Erythranthe guttata
Migut.J00784 Erythranthe guttata
MSTRG.10928 Avicennia marina
MSTRG.5521 Avicennia marina
Nn2g15179 Nelumbo nucifera
Oeu006739.1 Olea europaea
Oeu056517.1 Olea europaea
Oeu064882.1 Olea europaea
Os03g0816500 Oryza sativa ssp. japonica
PGR004G1582 Punica granatum
PGR102G0693 Punica granatum
Phvul.001G131400 Phaseolus vulgaris
Phvul.009G262600 Phaseolus vulgaris
Potri.003G070000 Populus trichocarpa
Potri.003G070100 Populus trichocarpa
Potri.016G132300 Populus trichocarpa
Pp3c15_12450 Physcomitrium patens
Prupe.3G036700 Prunus persica
Prupe.6G289000 Prunus persica
Psat1g115360 Pisum sativum
Psat5g189880 Pisum sativum
Psat7g228080 Pisum sativum
PSO339G1865 Papaver somniferum
PSO384G1766 Papaver somniferum
QL05p002051 Quercus lobata
QL05p003212 Quercus lobata
QL07p033230 Quercus lobata
RcHm_v2.0_Chr2g0146601 Rosa chinensis
RcHm_v2.0_Chr3g0461361 Rosa chinensis
Rhsim04G0123200 Rhododendron simsii
Rhsim12G0211800 Rhododendron simsii
Sabra03G0041200 Salix brachista
Sabra04G0150300 Salix brachista
SalBow6G4487 Salvia bowleyana
SalBow6G5848 Salvia bowleyana
Sc02g0000760 Simmondsia chinensis
Sc10g0007940 Simmondsia chinensis
Sed0001633 Sechium edule
Sed0009033 Sechium edule
SEGI_13750 Sequoiadendron giganteum
SEGI_16548 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33317 Striga asiatica
SHI25217 Sapria himalayana
Sp3g12400 Schrenkiella parvula
TAR633G0659 Trochodendron aralioides
TAR633G1730 Trochodendron aralioides
THA.LOC104815616 Tarenaya hassleriana
THA.LOC104823314 Tarenaya hassleriana
Thecc.04G156400 Theobroma cacao
Thecc.06G125900 Theobroma cacao
Thhalv10014289m.g Eutrema salsugineum
Thhalv10020706m.g Eutrema salsugineum
TPR.G27720 Trifolium pratense
TPR.G5008 Trifolium pratense
TWI14G1117 Tripterygium wilfordii
vmacro08933 Vaccinium macrocarpon
vmacro22021 Vaccinium macrocarpon
VMungo0331G1094 Vigna mungo
VMungo0331G2034 Vigna mungo
VMungo0647G2172 Vigna mungo
VMungo0720G1619 Vigna mungo
VMungo1309G0789 Vigna mungo
Zm00001eb212020 Zea mays

User provided reference genes

Program Settings