Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26860 Brassica napus
Aa31LG9G14230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2682 Anthoceros agrestis
Actinidia21322 Actinidia chinensis
Actinidia23810 Actinidia chinensis
Ah.06g188530 Amaranthus hybridus
AL6G42100 Arabidopsis lyrata
Aqoxy6G00217 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IJ94GX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JPFK87 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VCNM2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0XLBA Arachis hypogaea
AT4G08330 Arabidopsis thaliana
ATR0743G272 Amborella trichopoda
Atru.chr13.1461 Acer truncatum
Atru.chr13.1483 Acer truncatum
Atru.chr6.3490 Acer truncatum
AUR62000558 Chenopodium quinoa
AUR62006909 Chenopodium quinoa
AUR62014338 Chenopodium quinoa
AUR62019080 Chenopodium quinoa
BcaB05g23940 Brassica carinata
BcaC03g16448 Brassica carinata
BolSC33t60637H Brassica oleracea
BraA02t07697Z Brassica rapa
C02p42680 Brassica napus
CAN.G264.5 Capsicum annuum
CANSAT25G3576 Cannabis sativa
CANSAT25G3664 Cannabis sativa
CARHR259420 Cardamine hirsuta
Carub.0006s2689 Capsella rubella
Ca_12617_v3 Cicer arietinum L.
Cc10_g11880 Coffea canephora
Ciclev10002808m.g Citrus clementina
CiPaw.05G221600 Carya illinoinensis
CiPaw.06G030900 Carya illinoinensis
ClCG11G015750 Citrullus lanatus
COL.COLO4_36312 Corchorus olitorius
Cpa.g.sc37.41 Carica papaya
Cpa.g.sc64.87 Carica papaya
CsaV3_4G028260 Cucumis sativus L.
CSS0003781 Camellia sinensis var. sinensis
CSS0032864 Camellia sinensis var. sinensis
CSS0046765 Camellia sinensis var. sinensis
Dinv07220 Davidia involucrata
Dinv07260 Davidia involucrata
Duzib041G0745 Durio zibethinus
Duzib093G0952 Durio zibethinus
Duzib116G0828 Durio zibethinus
Duzib133G0034 Durio zibethinus
EL10Ac1g01010 Beta vulgaris
EL10Ac4g09660 Beta vulgaris
Eucgr.F04352 Eucalyptus grandis
Eucgr.K02349 Eucalyptus grandis
FAN15G0091 Fragaria x ananassa
FAN15G0686 Fragaria x ananassa
FAN20G1789 Fragaria x ananassa
FAN24G1923 Fragaria x ananassa
FAN27G0698 Fragaria x ananassa
FAN27G2034 Fragaria x ananassa
FvH4_2g17280 Fragaria vesca
FvH4_2g26960 Fragaria vesca
Glyma.04G249800 Glycine max
Glyma.05G195800 Glycine max
Glyma.06G113100 Glycine max
Glyma.07G060200 Glycine max
Glyma.08G003400 Glycine max
Glyma.13G079000 Glycine max
Glyma.14G150300 Glycine max
Gohir.A01G189000 Gossypium hirsutum
Gohir.A05G268800 Gossypium hirsutum
Gohir.A06G044800 Gossypium hirsutum
Gohir.A11G144700 Gossypium hirsutum
Gohir.D01G180500 Gossypium hirsutum
Gohir.D05G270700 Gossypium hirsutum
Gohir.D06G045300 Gossypium hirsutum
Gohir.D11G152366 Gossypium hirsutum
Gorai.002G222100 Gossypium raimondii
Gorai.009G283300 Gossypium raimondii
Gorai.010G050300 Gossypium raimondii
GSVIVG01008867001 Vitis vinifera
GSVIVG01022376001 Vitis vinifera
HanXRQChr04g0125231 Helianthus annuus
Haze_00442 Corylus avellana
Hma1.2p1_0161F.1_g071770 Hydrangea macrophylla
Hma1.2p1_0597F.1_g186580 Hydrangea macrophylla
Hma1.2p1_0619F.1_g190390 Hydrangea macrophylla
HPP92_013878 Vanilla planifolia
HPP92_013888 Vanilla planifolia
HPP92_015766 Vanilla planifolia
HPP92_018105 Vanilla planifolia
HPP92_019003 Vanilla planifolia
Hund17293 Selenicereus undatus
Hund21783 Selenicereus undatus
Hund26810 Selenicereus undatus
Lalb_Chr04g0253431 Lupinus albus
Lalb_Chr07g0184161 Lupinus albus
Lalb_Chr10g0101671 Lupinus albus
Lalb_Chr11g0065901 Lupinus albus
Lj1g0013118 Lotus japonicus
Lj1g0019913 Lotus japonicus
Lj3g0018377 Lotus japonicus
Lj4g0019423 Lotus japonicus
Lj4P627T24 Lonicera japonica
Lj7P340T28 Lonicera japonica
Lju12250C0T7 Lonicera japonica
Lsat_1_v5_gn_1_10021 Lactuca sativa
Lsat_1_v5_gn_5_176181 Lactuca sativa
Manes.02G163400 Manihot esculenta
Manes.13G057400 Manihot esculenta
Manes.18G077306 Manihot esculenta
Mapoly0166s0008 Marchantia polymorpha
MBI11_g05791_MAGBIO Magnolia biondii
MD08G1162700 Malus domestica
MD10G1145900 Malus domestica
MD15G1348300 Malus domestica
Medtr1g030060 Medicago truncatula
Medtr3g088030 Medicago truncatula
Medtr8g094790 Medicago truncatula
MELO3C010478.2 Cucumis melo
Migut.C01126 Erythranthe guttata
Migut.H01237 Erythranthe guttata
Migut.N00692 Erythranthe guttata
MSTRG.14138 Avicennia marina
MSTRG.25383 Avicennia marina
Nitab4.5_0001187g0040 Nicotiana tabacum
Nitab4.5_0001344g0050 Nicotiana tabacum
Nitab4.5_0001905g0020 Nicotiana tabacum
Nn1g08798 Nelumbo nucifera
Nn3g19971 Nelumbo nucifera
Nn5g28288 Nelumbo nucifera
Oeu017298.1 Olea europaea
Oeu059436.2 Olea europaea
Os01g0833400 Oryza sativa ssp. japonica
Os05g0126800 Oryza sativa ssp. japonica
Peaxi162Scf00079g00248 Petunia axillaris
Peaxi162Scf00304g00221 Petunia axillaris
PGR044G0115 Punica granatum
PGR044G1945 Punica granatum
PGR083G2718 Punica granatum
PGR102G2107 Punica granatum
PGSC0003DMG400006659 Solanum tuberosum
Phvul.002G276300 Phaseolus vulgaris
Phvul.008G161200 Phaseolus vulgaris
Phvul.009G125000 Phaseolus vulgaris
Potri.002G083600 Populus trichocarpa
Potri.005G070600 Populus trichocarpa
Potri.005G178000 Populus trichocarpa
Potri.014G197000 Populus trichocarpa
Prupe.1G497200 Prunus persica
Prupe.8G184300 Prunus persica
Psat5g087400 Pisum sativum
Psat6g041160 Pisum sativum
Psat7g043280 Pisum sativum
PSO017G2558 Papaver somniferum
PSO170G4666 Papaver somniferum
PSO528G0096 Papaver somniferum
QL09p034593 Quercus lobata
RcHm_v2.0_Chr6g0281781 Rosa chinensis
RcHm_v2.0_Chr6g0295821 Rosa chinensis
Rhsim01G0246600 Rhododendron simsii
Rhsim06G0103500 Rhododendron simsii
Sabra02G0065600 Salix brachista
Sabra05G0057400 Salix brachista
Sabra14G0133400 Salix brachista
SalBow1G0828 Salvia bowleyana
SalBow1G3156 Salvia bowleyana
SalBow1G8517 Salvia bowleyana
SalBow1G8741 Salvia bowleyana
SalBow7G0223 Salvia bowleyana
SalBow7G3799 Salvia bowleyana
Sed0000027 Sechium edule
SGA_v2.0_scaffold120G33021 Striga asiatica
SGA_v2.0_scaffold159G37562 Striga asiatica
SGA_v2.0_scaffold52G18966 Striga asiatica
SHI08457 Sapria himalayana
SMO119G0032 Selaginella moellendorffii
Solyc04g071630.3 Solanum lycopersicum
Solyc06g048850.3 Solanum lycopersicum
Sopen04g027620 Solanum pennellii
Sopen06g015140 Solanum pennellii
Sp6g09610 Schrenkiella parvula
TAR381G1109 Trochodendron aralioides
TAR636G0511 Trochodendron aralioides
THA.LOC104806822 Tarenaya hassleriana
THA.LOC104808821 Tarenaya hassleriana
THA.LOC104817332 Tarenaya hassleriana
THA.LOC104819508 Tarenaya hassleriana
THA.LOC104826640 Tarenaya hassleriana
Thecc.01G205400 Theobroma cacao
Thecc.08G125400 Theobroma cacao
Thhalv10029030m.g Eutrema salsugineum
TPR.G25816 Trifolium pratense
TPR.G37390 Trifolium pratense
TWI32G0782 Tripterygium wilfordii
TWI36G1015 Tripterygium wilfordii
TWI36G1333 Tripterygium wilfordii
TWI74G0103 Tripterygium wilfordii
unitig_46.g18103 Utricularia gibba
unitig_94.g28335 Utricularia gibba
VMungo0251G0521 Vigna mungo
VMungo1309G0419 Vigna mungo
Zm00001eb289950 Zea mays
Zm00001eb354990 Zea mays
Zm00001eb368310 Zea mays

User provided reference genes

Program Settings