Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02810 Brassica napus
A03p63930 Brassica napus
A07p03180 Brassica napus
A08p21610 Brassica napus
A09p11560 Brassica napus
Aa31LG6G12860 Aethionema arabicum
Actinidia02367 Actinidia chinensis
Actinidia15450 Actinidia chinensis
Actinidia17008 Actinidia chinensis
Actinidia27234 Actinidia chinensis
AL3G50780 Arabidopsis lyrata
Aqoxy6G02126 Aquilegia oxysepala
AT2G17770 Arabidopsis thaliana
AT4G35900 Arabidopsis thaliana
Atru.chr13.244 Acer truncatum
Atru.chr3.881 Acer truncatum
AUR62018275 Chenopodium quinoa
BcaB03g16550 Brassica carinata
BcaB07g31705 Brassica carinata
BcaC01g00527 Brassica carinata
BcaC04g22944 Brassica carinata
BcaC06g36320 Brassica carinata
BcaNung00784 Brassica carinata
BcaNung04885 Brassica carinata
BcaNung05055 Brassica carinata
BolC1t00299H Brassica oleracea
BolC3t20356H Brassica oleracea
BolC7t40942H Brassica oleracea
BolC7t46566H Brassica oleracea
BolC9t54251H Brassica oleracea
BraA01t00264Z Brassica rapa
BraA03t15462Z Brassica rapa
BraA07t28114Z Brassica rapa
BraA08t34108Z Brassica rapa
BraA09t36795Z Brassica rapa
BraA09t36802Z Brassica rapa
C01p03140 Brassica napus
C03p80970 Brassica napus
C07p05420 Brassica napus
C07p61400 Brassica napus
C09p13610 Brassica napus
CAN.G890.4 Capsicum annuum
CANSAT01G0941 Cannabis sativa
CANSAT25G2479 Cannabis sativa
CARHR108160 Cardamine hirsuta
CARHR244290 Cardamine hirsuta
Carub.0003s3191 Capsella rubella
Carub.0007s0433 Capsella rubella
Cc07_g11170 Coffea canephora
Cc10_g01330 Coffea canephora
CDE09G0805 Ceratophyllum demersum
Cfa007016 Carpinus fangiana
Cfa013989 Carpinus fangiana
Ciclev10003845m.g Citrus clementina
CiPaw.07G145300 Carya illinoinensis
CiPaw.08G068400 Carya illinoinensis
CiPaw.08G127600 Carya illinoinensis
ClCG10G000520 Citrullus lanatus
COL.COLO4_22478 Corchorus olitorius
COL.COLO4_26108 Corchorus olitorius
COL.COLO4_26500 Corchorus olitorius
Cpa.g.sc26.287 Carica papaya
Cpa.g.sc6.298 Carica papaya
CsaV3_3G000600 Cucumis sativus L.
DCAR_022938 Daucus carota
Dinv08561 Davidia involucrata
Dinv39546 Davidia involucrata
Dinv40128 Davidia involucrata
Duzib093G0576 Durio zibethinus
Duzib147G1072 Durio zibethinus
Duzib264G0309 Durio zibethinus
ECA232G3395 Erigeron canadensis
EL10Ac1g02139 Beta vulgaris
EL10Ac6g15162 Beta vulgaris
EL10Ac6g15165 Beta vulgaris
Eucgr.F01674 Eucalyptus grandis
Eucgr.J02482 Eucalyptus grandis
FAN15G0714 Fragaria x ananassa
FAN19G3075 Fragaria x ananassa
FAN20G2542 Fragaria x ananassa
FAN23G2926 Fragaria x ananassa
FAN26G3159 Fragaria x ananassa
FAN27G3080 Fragaria x ananassa
FAN28G0558 Fragaria x ananassa
FvH4_1g11270 Fragaria vesca
FvH4_2g38080 Fragaria vesca
Glyma.01G163500 Glycine max
Glyma.02G045500 Glycine max
Glyma.11G080000 Glycine max
Glyma.16G123451 Glycine max
Gohir.A01G109700 Gossypium hirsutum
Gohir.A02G173200 Gossypium hirsutum
Gohir.A05G184500 Gossypium hirsutum
Gohir.A05G256250 Gossypium hirsutum
Gohir.A11G172900 Gossypium hirsutum
Gohir.D01G096500 Gossypium hirsutum
Gohir.D03G006700 Gossypium hirsutum
Gohir.D05G187300 Gossypium hirsutum
Gohir.D05G258000 Gossypium hirsutum
Gohir.D11G179900 Gossypium hirsutum
Gorai.002G122200 Gossypium raimondii
Gorai.003G007000 Gossypium raimondii
Gorai.007G191800 Gossypium raimondii
Gorai.009G192500 Gossypium raimondii
Gorai.009G269300 Gossypium raimondii
GSVIVG01006332001 Vitis vinifera
GSVIVG01009970001 Vitis vinifera
HanXRQChr05g0133741 Helianthus annuus
HanXRQChr15g0487141 Helianthus annuus
Haze_03715 Corylus avellana
Haze_22676 Corylus avellana
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla
Hma1.2p1_0561F.1_g178920 Hydrangea macrophylla
HPP92_012946 Vanilla planifolia
HPP92_022184 Vanilla planifolia
HPP92_022194 Vanilla planifolia
Hund05165 Selenicereus undatus
Hund16511 Selenicereus undatus
Lalb_Chr09g0321511 Lupinus albus
Lalb_Chr16g0377411 Lupinus albus
Lj1g0008463 Lotus japonicus
Lj1g0021038 Lotus japonicus
Lj2g0025662 Lotus japonicus
Lsat_1_v5_gn_4_145080 Lactuca sativa
Manes.01G149900 Manihot esculenta
Manes.02G109000 Manihot esculenta
Manes.05G144400 Manihot esculenta
Manes.18G012121 Manihot esculenta
MBI08_g06420_MAGBIO Magnolia biondii
MD02G1125100 Malus domestica
MD15G1008300 Malus domestica
MD15G1240800 Malus domestica
Medtr5g022780 Medicago truncatula
Medtr7g015990 Medicago truncatula
Medtr8g075130 Medicago truncatula
MELO3C013748.2 Cucumis melo
Migut.H02187 Erythranthe guttata
MSTRG.22349 Avicennia marina
MSTRG.24234 Avicennia marina
Nitab4.5_0000188g0190 Nicotiana tabacum
Nitab4.5_0001789g0110 Nicotiana tabacum
Nitab4.5_0002337g0180 Nicotiana tabacum
Nn2g14480 Nelumbo nucifera
Oeu012566.1 Olea europaea
Oeu020389.1 Olea europaea
Oeu033812.1 Olea europaea
Os08g0549600 Oryza sativa ssp. japonica
Os09g0540800 Oryza sativa ssp. japonica
Peaxi162Scf00328g00414 Petunia axillaris
Peaxi162Scf00439g00042 Petunia axillaris
PGR031G1921 Punica granatum
PGR083G0975 Punica granatum
PGR102G0808 Punica granatum
PGSC0003DMG400003652 Solanum tuberosum
PGSC0003DMG400023897 Solanum tuberosum
Phvul.002G105700 Phaseolus vulgaris
Phvul.003G266100 Phaseolus vulgaris
Phvul.009G018700 Phaseolus vulgaris
Potri.002G018400 Populus trichocarpa
Potri.005G109500 Populus trichocarpa
Potri.005G243400 Populus trichocarpa
Prupe.1G361100 Prunus persica
Prupe.7G173300 Prunus persica
Psat2g152560 Pisum sativum
PSO541G2637 Papaver somniferum
PSO675G4415 Papaver somniferum
QL02p012465 Quercus lobata
QL06p051331 Quercus lobata
RcHm_v2.0_Chr2g0098731 Rosa chinensis
RcHm_v2.0_Chr6g0303481 Rosa chinensis
Rhsim06G0017800 Rhododendron simsii
Rhsim08G0031400 Rhododendron simsii
Rhsim10G0207400 Rhododendron simsii
Sabra02G0014700 Salix brachista
Sabra05G0089800 Salix brachista
Sabra05G0188500 Salix brachista
SalBow3G1427 Salvia bowleyana
SalBow3G2852 Salvia bowleyana
Sc02g0008740 Simmondsia chinensis
Sc03g0003730 Simmondsia chinensis
Sed0019142 Sechium edule
SGA_v2.0_scaffold137G35070 Striga asiatica
Solyc02g061990.3 Solanum lycopersicum
Solyc02g083520.2 Solanum lycopersicum
Sopen02g012950 Solanum pennellii
Sopen02g028310 Solanum pennellii
Sp3g31180 Schrenkiella parvula
Sp7g33680 Schrenkiella parvula
TAR625G0644 Trochodendron aralioides
TAR628G1529 Trochodendron aralioides
THA.LOC104807508 Tarenaya hassleriana
THA.LOC104819740 Tarenaya hassleriana
Thecc.01G013300 Theobroma cacao
Thecc.08G048800 Theobroma cacao
Thhalv10023128m.g Eutrema salsugineum
Thhalv10025822m.g Eutrema salsugineum
TPR.G10558 Trifolium pratense
TPR.G19489 Trifolium pratense
TWI09G0177 Tripterygium wilfordii
TWI53G1588 Tripterygium wilfordii
unitig_26.g9887 Utricularia gibba
unitig_736.g22724 Utricularia gibba
VMungo0251G3205 Vigna mungo
VMungo1215G2112 Vigna mungo
VMungo1309G1226 Vigna mungo

User provided reference genes

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