Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03220 Brassica napus
A10p23250 Brassica napus
Aa31LG11G13800 Aethionema arabicum
Actinidia17606 Actinidia chinensis
Actinidia18081 Actinidia chinensis
Actinidia26271 Actinidia chinensis
AL6G26620 Arabidopsis lyrata
Aqoxy1G03531 Aquilegia oxysepala
Aqoxy3G03729 Aquilegia oxysepala
Aqoxy3G03730 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6PTW1V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JWHM9L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SVI1UB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WJSS10 Arachis hypogaea
AT5G15780 Arabidopsis thaliana
ATR0827G162 Amborella trichopoda
Atru.chr8.632 Acer truncatum
Atru.chr8.633 Acer truncatum
Atru.chr8.639 Acer truncatum
AUR62009478 Chenopodium quinoa
AUR62023157 Chenopodium quinoa
BcaC03g18449 Brassica carinata
BcaC04g18938 Brassica carinata
BcaNung02204 Brassica carinata
BolC2t06720H Brassica oleracea
BolC9t58973H Brassica oleracea
BraA02t05293Z Brassica rapa
BraA10t44393Z Brassica rapa
C02p07970 Brassica napus
C09p61320 Brassica napus
CAN.G427.4 Capsicum annuum
CAN.G497.56 Capsicum annuum
CANSAT64G0201 Cannabis sativa
CARHR197550 Cardamine hirsuta
Carub.0006s1393 Capsella rubella
Cc07_g04510 Coffea canephora
Ciclev10012100m.g Citrus clementina
CiPaw.03G082700 Carya illinoinensis
CiPaw.04G052000 Carya illinoinensis
ClCG07G016060 Citrullus lanatus
ClCG11G004980 Citrullus lanatus
COL.COLO4_19736 Corchorus olitorius
COL.COLO4_19737 Corchorus olitorius
Cpa.g.sc541.5 Carica papaya
CsaV3_4G010050 Cucumis sativus L.
CsaV3_5G038710 Cucumis sativus L.
CSS0002115 Camellia sinensis var. sinensis
CSS0026022 Camellia sinensis var. sinensis
CSS0050346 Camellia sinensis var. sinensis
DCAR_011012 Daucus carota
DCAR_025455 Daucus carota
DCAR_025456 Daucus carota
Dinv33868 Davidia involucrata
Dinv34907 Davidia involucrata
Duzib138G1365 Durio zibethinus
Duzib138G1918 Durio zibethinus
Duzib211G0567 Durio zibethinus
ECA232G1221 Erigeron canadensis
ECA238G2003 Erigeron canadensis
EL10Ac2g04439 Beta vulgaris
Eucgr.J01410 Eucalyptus grandis
FAN02G1536 Fragaria x ananassa
FAN02G3939 Fragaria x ananassa
FAN05G0575 Fragaria x ananassa
FAN05G3920 Fragaria x ananassa
FAN09G2798 Fragaria x ananassa
FAN09G3792 Fragaria x ananassa
FAN14G2959 Fragaria x ananassa
FAN14G4737 Fragaria x ananassa
FvH4_6g46330 Fragaria vesca
FvH4_6g46340 Fragaria vesca
Glyma.08G251500 Glycine max
Glyma.13G051700 Glycine max
Glyma.13G051900 Glycine max
Glyma.18G274200 Glycine max
Glyma.19G034900 Glycine max
Glyma.19G035600 Glycine max
Glyma.19G035700 Glycine max
Gohir.A07G179300 Gossypium hirsutum
Gohir.A07G179500 Gossypium hirsutum
Gohir.A11G159900 Gossypium hirsutum
Gohir.D07G186200 Gossypium hirsutum
Gohir.D07G186300 Gossypium hirsutum
Gohir.D11G166000 Gossypium hirsutum
Gorai.001G206700 Gossypium raimondii
Gorai.001G206900 Gossypium raimondii
Gorai.007G177000 Gossypium raimondii
GSVIVG01036543001 Vitis vinifera
HanXRQChr14g0452501 Helianthus annuus
HanXRQChr15g0464801 Helianthus annuus
HanXRQChr15g0489341 Helianthus annuus
Haze_14379 Corylus avellana
Hma1.2p1_0448F.1_g154830 Hydrangea macrophylla
Hma1.2p1_1837F.1_g304780 Hydrangea macrophylla
HPP92_008278 Vanilla planifolia
Hund13673 Selenicereus undatus
Hund16236 Selenicereus undatus
Lalb_Chr02g0158801 Lupinus albus
Lj1g0001231 Lotus japonicus
Lj2g0016580 Lotus japonicus
Lj4A124T57 Lonicera japonica
Lsat_1_v5_gn_2_90181 Lactuca sativa
Lsat_1_v5_gn_4_173421 Lactuca sativa
Manes.02G059700 Manihot esculenta
MBI07_g30979_MAGBIO Magnolia biondii
MBI12_g13713_MAGBIO Magnolia biondii
MBI14_g36171_MAGBIO Magnolia biondii
MBI15_g33041_MAGBIO Magnolia biondii
MBI16_g07038_MAGBIO Magnolia biondii
MBI16_g11017_MAGBIO Magnolia biondii
MBI16_g11621_MAGBIO Magnolia biondii
MBI18_g23803_MAGBIO Magnolia biondii
MBI18_g27928_MAGBIO Magnolia biondii
MBI19_g00148_MAGBIO Magnolia biondii
MD09G1074600 Malus domestica
MD09G1074800 Malus domestica
MD09G1075000 Malus domestica
MD09G1075400 Malus domestica
MD09G1075500 Malus domestica
MD16G1014300 Malus domestica
MD17G1066000 Malus domestica
Medtr6g015995 Medicago truncatula
Medtr7g016950 Medicago truncatula
MELO3C018892.2 Cucumis melo
MELO3C022051.2 Cucumis melo
Migut.K00883 Erythranthe guttata
MSTRG.15433 Avicennia marina
MSTRG.2972 Avicennia marina
Nitab4.5_0000154g0140 Nicotiana tabacum
Nitab4.5_0001339g0060 Nicotiana tabacum
Nitab4.5_0001434g0120 Nicotiana tabacum
Nitab4.5_0009899g0010 Nicotiana tabacum
Nn3g17524 Nelumbo nucifera
Oeu031836.1 Olea europaea
Oeu062183.1 Olea europaea
Os10g0205700 Oryza sativa ssp. japonica
Peaxi162Scf00020g02335 Petunia axillaris
Peaxi162Scf01002g00114 Petunia axillaris
PGR004G1231 Punica granatum
PGR042G0257 Punica granatum
PGSC0003DMG400001028 Solanum tuberosum
PGSC0003DMG400001380 Solanum tuberosum
Phvul.004G042600 Phaseolus vulgaris
Phvul.004G042700 Phaseolus vulgaris
Phvul.004G042800 Phaseolus vulgaris
Phvul.008G026300 Phaseolus vulgaris
Potri.004G114300 Populus trichocarpa
Potri.017G100600 Populus trichocarpa
Prupe.3G248600 Prunus persica
Prupe.3G248700 Prunus persica
Psat1g065120 Pisum sativum
Psat3g203200 Pisum sativum
PSO063G5324 Papaver somniferum
PSO782G2223 Papaver somniferum
QL02p065219 Quercus lobata
RcHm_v2.0_Chr2g0164801 Rosa chinensis
RcHm_v2.0_Chr2g0164841 Rosa chinensis
Rhsim08G0077500 Rhododendron simsii
Rhsim08G0077700 Rhododendron simsii
Rhsim10G0059400 Rhododendron simsii
Sabra04G0071400 Salix brachista
Sabra17G0086600 Salix brachista
SalBow1G2513 Salvia bowleyana
SalBow1G5190 Salvia bowleyana
Sc11g0008840 Simmondsia chinensis
Sed0000331 Sechium edule
Sed0002688 Sechium edule
Sed0005495 Sechium edule
SEGI_00399 Sequoiadendron giganteum
SEGI_14085 Sequoiadendron giganteum
SEGI_16110 Sequoiadendron giganteum
SEGI_16578 Sequoiadendron giganteum
SEGI_17214 Sequoiadendron giganteum
SEGI_22916 Sequoiadendron giganteum
SEGI_30342 Sequoiadendron giganteum
SEGI_33280 Sequoiadendron giganteum
SEGI_33454 Sequoiadendron giganteum
SEGI_34452 Sequoiadendron giganteum
SEGI_36083 Sequoiadendron giganteum
SEGI_39020 Sequoiadendron giganteum
SEGI_39801 Sequoiadendron giganteum
SGA_v2.0_scaffold148G36453 Striga asiatica
SMO172G0191 Selaginella moellendorffii
SMO356G0350 Selaginella moellendorffii
SMO358G0492 Selaginella moellendorffii
Solyc02g089250.4 Solanum lycopersicum
Solyc03g046580.1 Solanum lycopersicum
Sopen02g034040 Solanum pennellii
Sopen03g010780 Solanum pennellii
Sp6g28340 Schrenkiella parvula
TAR629G1921 Trochodendron aralioides
THA.LOC104805529 Tarenaya hassleriana
THA.LOC104820977 Tarenaya hassleriana
Thecc.04G106800 Theobroma cacao
Thecc.04G107000 Theobroma cacao
Thhalv10013771m.g Eutrema salsugineum
TPR.G15938 Trifolium pratense
TPR.G23379 Trifolium pratense
TWI34G1159 Tripterygium wilfordii
TWI60G0197 Tripterygium wilfordii
vmacro05612 Vaccinium macrocarpon
vmacro18125 Vaccinium macrocarpon
VMungo0464G0668 Vigna mungo
VMungo0464G1663 Vigna mungo
Zm00001eb196870 Zea mays

User provided reference genes

Program Settings