Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42810 Brassica napus
A02p42850 Brassica napus
A06p30150 Brassica napus
Aa31LG1G18420 Aethionema arabicum
Actinidia25563 Actinidia chinensis
Ah.11g045510 Amaranthus hybridus
AL3G40400 Arabidopsis lyrata
AL8G40600 Arabidopsis lyrata
Aqoxy1G03157 Aquilegia oxysepala
Aqoxy1G03342 Aquilegia oxysepala
Aqoxy2G00205 Aquilegia oxysepala
Aqoxy5G03311 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6Z7KQ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C4UAPE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3UYEB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QFJ6TS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3TYQS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XMC2I2 Arachis hypogaea
AT5G63520 Arabidopsis thaliana
ATR0561G042 Amborella trichopoda
ATR0561G074 Amborella trichopoda
ATR0561G214 Amborella trichopoda
ATR0561G235 Amborella trichopoda
Atru.chr6.1822 Acer truncatum
AUR62029583 Chenopodium quinoa
AUR62038854 Chenopodium quinoa
BcaB02g09754 Brassica carinata
BcaB07g29692 Brassica carinata
BcaC01g06930 Brassica carinata
BcaC03g18211 Brassica carinata
BolC2t12350H Brassica oleracea
BolC3t18546H Brassica oleracea
BraA02t09207Z Brassica rapa
BraA06t25966Z Brassica rapa
C02p62780 Brassica napus
C03p62920 Brassica napus
CAN.G676.19 Capsicum annuum
CANSAT80G0326 Cannabis sativa
CANSAT80G2651 Cannabis sativa
CARHR277380 Cardamine hirsuta
Carub.0008s2425 Capsella rubella
Ca_16056_v3 Cicer arietinum L.
Cc01_g02380 Coffea canephora
CDE06G2031 Ceratophyllum demersum
Cfa018776 Carpinus fangiana
Ciclev10031319m.g Citrus clementina
Ciclev10033680m.g Citrus clementina
CiPaw.11G005500 Carya illinoinensis
ClCG03G003870 Citrullus lanatus
COL.COLO4_07119 Corchorus olitorius
COL.COLO4_07120 Corchorus olitorius
Cpa.g.sc13.92 Carica papaya
Cpa.g.sc4.169 Carica papaya
CSS0012678 Camellia sinensis var. sinensis
DCAR_016380 Daucus carota
DCAR_016382 Daucus carota
DCAR_021629 Daucus carota
DCAR_021631 Daucus carota
DCAR_021633 Daucus carota
Dinv23165 Davidia involucrata
Duzib068G1443 Durio zibethinus
Duzib084G0716 Durio zibethinus
Duzib205G1086 Durio zibethinus
ECA247G1358 Erigeron canadensis
EL10Ac5g11389 Beta vulgaris
Eucgr.B00095 Eucalyptus grandis
Eucgr.B00098 Eucalyptus grandis
Eucgr.F00440 Eucalyptus grandis
Eucgr.L01506 Eucalyptus grandis
FAN04G0895 Fragaria x ananassa
FAN04G2439 Fragaria x ananassa
FAN08G2527 Fragaria x ananassa
FAN13G1110 Fragaria x ananassa
FAN13G2783 Fragaria x ananassa
FAN18G2108 Fragaria x ananassa
FAN18G4277 Fragaria x ananassa
FvH4_5g08560 Fragaria vesca
FvH4_5g08570 Fragaria vesca
Glyma.04G196900 Glycine max
Glyma.06G168700 Glycine max
Gohir.A03G053200 Gossypium hirsutum
Gohir.A03G053300 Gossypium hirsutum
Gohir.D03G113600 Gossypium hirsutum
Gohir.D03G113900 Gossypium hirsutum
Gorai.003G119900 Gossypium raimondii
Gorai.003G120100 Gossypium raimondii
GSVIVG01008557001 Vitis vinifera
HanXRQChr00c0029g0571191 Helianthus annuus
HanXRQChr01g0000031 Helianthus annuus
HanXRQChr02g0034301 Helianthus annuus
HanXRQChr02g0034311 Helianthus annuus
HanXRQChr02g0034321 Helianthus annuus
HanXRQChr02g0034341 Helianthus annuus
HanXRQChr04g0099631 Helianthus annuus
HanXRQChr04g0099641 Helianthus annuus
HanXRQChr04g0099651 Helianthus annuus
HanXRQChr04g0099661 Helianthus annuus
HanXRQChr10g0317761 Helianthus annuus
HanXRQChr13g0403611 Helianthus annuus
HanXRQChr13g0407821 Helianthus annuus
HanXRQChr13g0407851 Helianthus annuus
HanXRQChr13g0407891 Helianthus annuus
HanXRQChr13g0407901 Helianthus annuus
HanXRQChr13g0408751 Helianthus annuus
HanXRQChr13g0408761 Helianthus annuus
HanXRQChr13g0408771 Helianthus annuus
HanXRQChr13g0408781 Helianthus annuus
HanXRQChr13g0408791 Helianthus annuus
HanXRQChr13g0408811 Helianthus annuus
Haze_07162 Corylus avellana
Hma1.2p1_0014F.1_g009260 Hydrangea macrophylla
Hund10145 Selenicereus undatus
Lalb_Chr08g0237261 Lupinus albus
Lj1g0000526 Lotus japonicus
Lj1g0016208 Lotus japonicus
Lj5A94T49 Lonicera japonica
Lj5A94T50 Lonicera japonica
Lsat_1_v5_gn_1_33020 Lactuca sativa
Manes.06G120800 Manihot esculenta
Manes.06G120900 Manihot esculenta
Mapoly0019s0043 Marchantia polymorpha
MBI11_g22691_MAGBIO Magnolia biondii
MD06G1138900 Malus domestica
MD06G1139000 Malus domestica
MD06G1139200 Malus domestica
MD06G1139500 Malus domestica
MD06G1139600 Malus domestica
MD06G1139800 Malus domestica
MD14G1155100 Malus domestica
MD14G1155200 Malus domestica
Medtr3g099090 Medicago truncatula
Migut.I00368 Erythranthe guttata
Migut.I00547 Erythranthe guttata
Migut.K00759 Erythranthe guttata
Migut.N02143 Erythranthe guttata
Migut.N02168 Erythranthe guttata
Migut.N02169 Erythranthe guttata
Migut.O00357 Erythranthe guttata
MSTRG.11269 Avicennia marina
Nitab4.5_0000636g0090 Nicotiana tabacum
Nitab4.5_0007721g0020 Nicotiana tabacum
Nitab4.5_0012330g0020 Nicotiana tabacum
Nn4g22275 Nelumbo nucifera
Oeu061142.1 Olea europaea
Oeu061143.2 Olea europaea
Peaxi162Scf00130g00520 Petunia axillaris
PGR083G0510 Punica granatum
PGSC0003DMG400023730 Solanum tuberosum
PGSC0003DMG400027287 Solanum tuberosum
PGSC0003DMG400038085 Solanum tuberosum
Phvul.009G165200 Phaseolus vulgaris
Potri.004G005700 Populus trichocarpa
Potri.011G010100 Populus trichocarpa
Potri.011G010200 Populus trichocarpa
Potri.012G100500 Populus trichocarpa
Potri.012G100600 Populus trichocarpa
Potri.015G098700 Populus trichocarpa
Potri.015G098800 Populus trichocarpa
Prupe.5G149100 Prunus persica
Prupe.5G149200 Prunus persica
Psat5g052120 Pisum sativum
QL03p041468 Quercus lobata
QL03p041488 Quercus lobata
QL10p002524 Quercus lobata
QL10p002543 Quercus lobata
QL10p002570 Quercus lobata
QL10p010962 Quercus lobata
QL10p010971 Quercus lobata
RcHm_v2.0_Chr7g0189831 Rosa chinensis
Rhsim08G0191500 Rhododendron simsii
Sabra12G0073800 Salix brachista
Sabra12G0073900 Salix brachista
Sabra15G0119600 Salix brachista
Sabra15G0119700 Salix brachista
SalBow5G0035 Salvia bowleyana
Sc10g0010520 Simmondsia chinensis
Sc10g0010530 Simmondsia chinensis
Sed0021268 Sechium edule
SEGI_07717 Sequoiadendron giganteum
SEGI_12810 Sequoiadendron giganteum
SEGI_40826 Sequoiadendron giganteum
SGA_v2.0_scaffold383G50423 Striga asiatica
Solyc04g016130.3 Solanum lycopersicum
Solyc04g016150.2 Solanum lycopersicum
Solyc04g016160.4 Solanum lycopersicum
Solyc10g080020.3 Solanum lycopersicum
Sopen04g008200 Solanum pennellii
Sopen04g008210 Solanum pennellii
Sopen10g030630 Solanum pennellii
Sp2g26610 Schrenkiella parvula
TAR622G0196 Trochodendron aralioides
TAR622G0641 Trochodendron aralioides
THA.LOC104798939 Tarenaya hassleriana
THA.LOC104798940 Tarenaya hassleriana
Thecc.03G131500 Theobroma cacao
Thecc.03G131600 Theobroma cacao
Thhalv10004000m.g Eutrema salsugineum
Thhalv10004048m.g Eutrema salsugineum
TPR.G27817 Trifolium pratense
TPR.G496 Trifolium pratense
TWI14G0714 Tripterygium wilfordii
TWI39G0380 Tripterygium wilfordii
vmacro19124 Vaccinium macrocarpon
VMungo1309G1507 Vigna mungo
VMungo1309G3084 Vigna mungo

User provided reference genes

Program Settings