Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18380 Brassica napus
A05p12580 Brassica napus
Aa31LG5G4180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1998 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3139 Anthoceros agrestis
Actinidia16126 Actinidia chinensis
Actinidia18991 Actinidia chinensis
Ah.11g047800 Amaranthus hybridus
AL4G28590 Arabidopsis lyrata
Aqoxy6G00786 Aquilegia oxysepala
Aqoxy6G02351 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0NDH2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.54SFA6 Arachis hypogaea
AT2G33040 Arabidopsis thaliana
ATR0730G108 Amborella trichopoda
Atru.chr9.581 Acer truncatum
AUR62008524 Chenopodium quinoa
AUR62021565 Chenopodium quinoa
BcaB01g01791 Brassica carinata
BcaB01g03960 Brassica carinata
BcaB01g03961 Brassica carinata
BcaB02g10520 Brassica carinata
BcaB05g22783 Brassica carinata
BcaB06g28495 Brassica carinata
BcaB06g28649 Brassica carinata
BcaC01g05883 Brassica carinata
BcaC02g07863 Brassica carinata
BcaC02g11373 Brassica carinata
BcaC02g11374 Brassica carinata
BcaC02g11376 Brassica carinata
BcaC08g44984 Brassica carinata
BcaC08g47262 Brassica carinata
BcaC08g47264 Brassica carinata
BolC3t14530H Brassica oleracea
BolC4t23195H Brassica oleracea
BolC4t27737H Brassica oleracea
BolC6t40073H Brassica oleracea
BolC6t40074H Brassica oleracea
BraA03t11101Z Brassica rapa
BraA04t18045Z Brassica rapa
BraA05t20195Z Brassica rapa
C03p21450 Brassica napus
C04p16450 Brassica napus
C06p26150 Brassica napus
C06p50470 Brassica napus
C06p50480 Brassica napus
C06p50490 Brassica napus
CAN.G1228.27 Capsicum annuum
CANSAT80G2201 Cannabis sativa
CARHR126960 Cardamine hirsuta
CARHR126980 Cardamine hirsuta
CARHR127000 Cardamine hirsuta
CARHR127030 Cardamine hirsuta
Carub.0004s1452 Capsella rubella
Ca_21165_v3 Cicer arietinum L.
CBR_g4476 Chara braunii
Cc03_g13130 Coffea canephora
CDE02G3519 Ceratophyllum demersum
CDE05G1000 Ceratophyllum demersum
Cfa019330 Carpinus fangiana
Cfa022512 Carpinus fangiana
Ciclev10021169m.g Citrus clementina
CiPaw.11G053100 Carya illinoinensis
CiPaw.11G053200 Carya illinoinensis
ClCG04G011820 Citrullus lanatus
COL.COLO4_06862 Corchorus olitorius
Cpa.g.sc25.176 Carica papaya
Cre15.g635850 Chlamydomonas reinhardtii
CsaV3_1G005960 Cucumis sativus L.
CSS0041329 Camellia sinensis var. sinensis
DCAR_002146 Daucus carota
DCAR_023345 Daucus carota
Dinv17411 Davidia involucrata
Dinv22783 Davidia involucrata
Dinv33826 Davidia involucrata
Duzib068G1237 Durio zibethinus
Duzib084G1273 Durio zibethinus
Duzib205G0199 Durio zibethinus
ECA233G0034 Erigeron canadensis
EL10Ac5g11127 Beta vulgaris
Eucgr.B00589 Eucalyptus grandis
FAN08G0721 Fragaria x ananassa
FAN13G2646 Fragaria x ananassa
FAN18G2096 Fragaria x ananassa
FvH4_5g13860 Fragaria vesca
Glyma.04G162800 Glycine max
Glyma.06G203200 Glycine max
Gohir.A03G070000 Gossypium hirsutum
Gohir.A07G068700 Gossypium hirsutum
Gohir.A12G182500 Gossypium hirsutum
Gohir.D03G096600 Gossypium hirsutum
Gohir.D06G107050 Gossypium hirsutum
Gohir.D07G073200 Gossypium hirsutum
Gohir.D12G185600 Gossypium hirsutum
Gorai.001G077400 Gossypium raimondii
Gorai.003G101200 Gossypium raimondii
Gorai.004G104400 Gossypium raimondii
Gorai.008G199000 Gossypium raimondii
Gorai.010G121700 Gossypium raimondii
GSVIVG01007868001 Vitis vinifera
HanXRQChr09g0246001 Helianthus annuus
HanXRQChr09g0248401 Helianthus annuus
HanXRQChr09g0248501 Helianthus annuus
HanXRQChr09g0248511 Helianthus annuus
HanXRQChr09g0248941 Helianthus annuus
HanXRQChr12g0374611 Helianthus annuus
HanXRQChr12g0374621 Helianthus annuus
Haze_05918 Corylus avellana
Haze_07721 Corylus avellana
Haze_07723 Corylus avellana
Haze_14434 Corylus avellana
Haze_27066 Corylus avellana
Hma1.2p1_0060F.1_g033120 Hydrangea macrophylla
Hma1.2p1_0774F.1_g216380 Hydrangea macrophylla
HPP92_009478 Vanilla planifolia
Hund02587 Selenicereus undatus
Hund09909 Selenicereus undatus
Lalb_Chr08g0246391 Lupinus albus
Lalb_Chr11g0061621 Lupinus albus
Lj1g0009894 Lotus japonicus
Lj5A102G94 Lonicera japonica
Lj5A435G20 Lonicera japonica
Lj9C471G2 Lonicera japonica
Lsat_1_v5_gn_8_121700 Lactuca sativa
Lsat_1_v5_gn_8_60340 Lactuca sativa
Manes.06G084900 Manihot esculenta
Manes.14G085400 Manihot esculenta
Mapoly0062s0010 Marchantia polymorpha
Mapoly0062s0085 Marchantia polymorpha
MBI11_g00916_MAGBIO Magnolia biondii
MBI13_g34044_MAGBIO Magnolia biondii
MCO01G597 Micromonas commoda
MD06G1202600 Malus domestica
MD14G1211800 Malus domestica
Medtr4g129790 Medicago truncatula
MELO3C002027.2 Cucumis melo
Migut.D01664 Erythranthe guttata
MSTRG.22966 Avicennia marina
Nitab4.5_0001485g0170 Nicotiana tabacum
Nitab4.5_0003660g0050 Nicotiana tabacum
Nitab4.5_0005072g0050 Nicotiana tabacum
Nitab4.5_0009401g0070 Nicotiana tabacum
Nn4g23423 Nelumbo nucifera
Nn8g40879 Nelumbo nucifera
Oeu014404.1 Olea europaea
Oeu061163.1 Olea europaea
Os10g0320400 Oryza sativa ssp. japonica
Peaxi162Scf00013g00630 Petunia axillaris
Peaxi162Scf00201g00237 Petunia axillaris
Peaxi162Scf00702g00035 Petunia axillaris
PGR083G0152 Punica granatum
PGSC0003DMG400024638 Solanum tuberosum
Phvul.009G191400 Phaseolus vulgaris
Potri.012G066100 Populus trichocarpa
Potri.015G057700 Populus trichocarpa
Pp3c18_8580 Physcomitrium patens
Pp3c19_11630 Physcomitrium patens
Pp3c19_5760 Physcomitrium patens
Pp3c21_11700 Physcomitrium patens
PRCOL_00000458 Prasinoderma coloniale
Prupe.5G204800 Prunus persica
Psat0s2642g0040 Pisum sativum
Psat0s2642g0080 Pisum sativum
Psat1g081800 Pisum sativum
Psat2g122480 Pisum sativum
Psat2g122600 Pisum sativum
PSO017G5003 Papaver somniferum
PSO478G0061 Papaver somniferum
QL10p019459 Quercus lobata
QL10p019470 Quercus lobata
QL10p019482 Quercus lobata
RcHm_v2.0_Chr7g0183071 Rosa chinensis
Rhsim08G0146100 Rhododendron simsii
Sabra15G0083800 Salix brachista
SalBow5G1734 Salvia bowleyana
Sc10g0009720 Simmondsia chinensis
Sc12g0006660 Simmondsia chinensis
Sed0007546 Sechium edule
SEGI_07328 Sequoiadendron giganteum
SEGI_10820 Sequoiadendron giganteum
SEGI_19317 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10961 Striga asiatica
SGA_v2.0_scaffold28G11757 Striga asiatica
SHI27070 Sapria himalayana
SHI36676 Sapria himalayana
SHI37440 Sapria himalayana
SMO367G0098 Selaginella moellendorffii
Solyc03g115110.4 Solanum lycopersicum
Sopen03g034180 Solanum pennellii
Sopen05g014100 Solanum pennellii
Sp4g15380 Schrenkiella parvula
TAR374G0254 Trochodendron aralioides
TAR622G0209 Trochodendron aralioides
TAR629G0740 Trochodendron aralioides
THA.LOC104801002 Tarenaya hassleriana
THA.LOC104826136 Tarenaya hassleriana
Thecc.03G101400 Theobroma cacao
Thhalv10016929m.g Eutrema salsugineum
TPR.G24877 Trifolium pratense
TWI60G0212 Tripterygium wilfordii
TWI81G0037 Tripterygium wilfordii
unitig_46.g18457 Utricularia gibba
vmacro17609 Vaccinium macrocarpon
VMungo1309G2770 Vigna mungo
Zm00001eb008610 Zea mays
Zm00001eb400220 Zea mays

User provided reference genes

Program Settings