Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p28300 Brassica napus
A06p06390 Brassica napus
A09p18510 Brassica napus
Aa31LG1G5280 Aethionema arabicum
Aa31LG2G10920 Aethionema arabicum
Actinidia19627 Actinidia chinensis
Actinidia19629 Actinidia chinensis
Actinidia29626 Actinidia chinensis
Ah.07g202760 Amaranthus hybridus
AL1G20260 Arabidopsis lyrata
AL2G18190 Arabidopsis lyrata
Aqoxy5G01378 Aquilegia oxysepala
Aqoxy5G01379 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1WVB8B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.30MVJR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.53Z6YZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CZ6CK7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ET429J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3DRUP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S3SE83 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TQJ3R9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UL2XNL Arachis hypogaea
AT1G09710 Arabidopsis thaliana
AT1G58220 Arabidopsis thaliana
ATR0582G130 Amborella trichopoda
Atru.chr13.1006 Acer truncatum
AUR62002401 Chenopodium quinoa
AUR62014349 Chenopodium quinoa
AUR62019092 Chenopodium quinoa
AUR62023790 Chenopodium quinoa
BcaB04g20193 Brassica carinata
BcaC04g22121 Brassica carinata
BcaC09g49499 Brassica carinata
BolC1t03546H Brassica oleracea
BolC5t29530H Brassica oleracea
BolC9t55230H Brassica oleracea
BraA01t02959Z Brassica rapa
BraA06t23850Z Brassica rapa
BraA09t37477Z Brassica rapa
C01p35850 Brassica napus
C05p07790 Brassica napus
C09p23120 Brassica napus
CAN.G193.10 Capsicum annuum
CAN.G475.23 Capsicum annuum
CAN.G806.11 Capsicum annuum
CANSAT35G1730 Cannabis sativa
CARHR009680 Cardamine hirsuta
CARHR053790 Cardamine hirsuta
Carub.0001s0905 Capsella rubella
Carub.0002s0638 Capsella rubella
Ca_23436_v3 Cicer arietinum L.
Ca_29526_v3 Cicer arietinum L.
CBR_g9135 Chara braunii
Cc10_g15920 Coffea canephora
CDE05G3064 Ceratophyllum demersum
CDE11G0791 Ceratophyllum demersum
Cfa009865 Carpinus fangiana
Cfa013800 Carpinus fangiana
Ciclev10000622m.g Citrus clementina
CiPaw.07G165000 Carya illinoinensis
CiPaw.08G055800 Carya illinoinensis
CiPaw.14G112200 Carya illinoinensis
ClCG08G011640 Citrullus lanatus
ClCG11G014590 Citrullus lanatus
Cpa.g.sc21.26 Carica papaya
CsaV3_2G030210 Cucumis sativus L.
CsaV3_3G048000 Cucumis sativus L.
CSS0012387 Camellia sinensis var. sinensis
CSS0018207 Camellia sinensis var. sinensis
CSS0036226 Camellia sinensis var. sinensis
DCAR_012853 Daucus carota
DCAR_012854 Daucus carota
DCAR_019315 Daucus carota
Dinv42609 Davidia involucrata
Duzib041G0541 Durio zibethinus
Duzib093G0230 Durio zibethinus
ECA246G1786 Erigeron canadensis
EL10Ac1g00993 Beta vulgaris
EL10Ac3g06093 Beta vulgaris
Eucgr.F02154 Eucalyptus grandis
FAN04G1055 Fragaria x ananassa
FAN08G0387 Fragaria x ananassa
FAN12G3643 Fragaria x ananassa
FAN12G3747 Fragaria x ananassa
FAN13G1335 Fragaria x ananassa
FAN18G0012 Fragaria x ananassa
FvH4_4g17970 Fragaria vesca
FvH4_5g34820 Fragaria vesca
Glyma.02G214600 Glycine max
Glyma.04G095300 Glycine max
Glyma.06G097100 Glycine max
Gohir.A01G126500 Gossypium hirsutum
Gohir.D01G114100 Gossypium hirsutum
Gorai.002G139000 Gossypium raimondii
GSVIVG01009184001 Vitis vinifera
HanXRQChr05g0163341 Helianthus annuus
HanXRQChr15g0484821 Helianthus annuus
Haze_07807 Corylus avellana
Haze_22463 Corylus avellana
Haze_23237 Corylus avellana
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla
Hma1.2p1_0125F.1_g058840 Hydrangea macrophylla
Hma1.2p1_0616F.1_g189970 Hydrangea macrophylla
Hma1.2p1_2397F.1_g321340 Hydrangea macrophylla
HPP92_016140 Vanilla planifolia
Hund04947 Selenicereus undatus
Hund17284 Selenicereus undatus
Lalb_Chr08g0242551 Lupinus albus
Lalb_Chr11g0064951 Lupinus albus
Lalb_Chr23g0270031 Lupinus albus
Lj1g0027025 Lotus japonicus
Lj4A717G27 Lonicera japonica
Lj4A717T32 Lonicera japonica
Lj4A737G58 Lonicera japonica
Lj4A88T36 Lonicera japonica
LjContig00408g0021434 Lotus japonicus
Lsat_1_v5_gn_6_104940 Lactuca sativa
Lsat_1_v5_gn_9_74001 Lactuca sativa
Manes.02G144600 Manihot esculenta
Manes.18G058300 Manihot esculenta
Mapoly0014s0193 Marchantia polymorpha
MBI16_g19592_MAGBIO Magnolia biondii
MD08G1198900 Malus domestica
MD15G1385800 Malus domestica
MD15G1386000 Malus domestica
Medtr3g100180 Medicago truncatula
Medtr8g024690 Medicago truncatula
MELO3C003521.2 Cucumis melo
MELO3C011083.2 Cucumis melo
Migut.A00432 Erythranthe guttata
Migut.F01437 Erythranthe guttata
MSTRG.11807 Avicennia marina
Nitab4.5_0000048g0150 Nicotiana tabacum
Nitab4.5_0000048g0160 Nicotiana tabacum
Nitab4.5_0000048g0170 Nicotiana tabacum
Nitab4.5_0000131g0210 Nicotiana tabacum
Nitab4.5_0000354g0150 Nicotiana tabacum
Nitab4.5_0001607g0150 Nicotiana tabacum
Nitab4.5_0005913g0020 Nicotiana tabacum
Nn1g05581 Nelumbo nucifera
Oeu018565.2 Olea europaea
Oeu040388.1 Olea europaea
Os02g0551400 Oryza sativa ssp. japonica
Peaxi162Scf00160g01038 Petunia axillaris
Peaxi162Scf00454g00323 Petunia axillaris
PGR031G0455 Punica granatum
PGR042G0823 Punica granatum
PGSC0003DMG400002048 Solanum tuberosum
PGSC0003DMG400009342 Solanum tuberosum
Phvul.008G182100 Phaseolus vulgaris
Phvul.009G036300 Phaseolus vulgaris
Potri.002G106500 Populus trichocarpa
Pp3c8_16730 Physcomitrium patens
Prupe.1G532600 Prunus persica
Prupe.1G532700 Prunus persica
Psat2g065280 Pisum sativum
Psat5g049040 Pisum sativum
Psat6g236040 Pisum sativum
PSO170G3999 Papaver somniferum
PSO210G3859 Papaver somniferum
PSO478G0048 Papaver somniferum
PSO478G0452 Papaver somniferum
PSO478G0631 Papaver somniferum
PSO478G2921 Papaver somniferum
PSO478G3694 Papaver somniferum
PSO782G3079 Papaver somniferum
PSO782G3353 Papaver somniferum
QL01p017023 Quercus lobata
QL09p017848 Quercus lobata
RcHm_v2.0_Chr7g0235501 Rosa chinensis
Rhsim07G0212100 Rhododendron simsii
Sabra02G0083800 Salix brachista
Sabra05G0119500 Salix brachista
SalBow4G2315 Salvia bowleyana
Sc15g0002710 Simmondsia chinensis
Sc26g0002970 Simmondsia chinensis
Sed0014936 Sechium edule
Sed0024254 Sechium edule
Sed0025417 Sechium edule
SEGI_24455 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40665 Striga asiatica
SHI20376 Sapria himalayana
SHI20380 Sapria himalayana
SHI20381 Sapria himalayana
Solyc04g076360.4 Solanum lycopersicum
Solyc12g087970.2 Solanum lycopersicum
Sopen00g008100 Solanum pennellii
Sopen12g030000 Solanum pennellii
Sp1g08300 Schrenkiella parvula
Sp2g05390 Schrenkiella parvula
TAR376G1177 Trochodendron aralioides
TAR628G1108 Trochodendron aralioides
THA.LOC104816794 Tarenaya hassleriana
Thecc.08G071400 Theobroma cacao
Thhalv10024079m.g Eutrema salsugineum
TPR.G35908 Trifolium pratense
TPR.G6339 Trifolium pratense
TWI36G0459 Tripterygium wilfordii
TWI56G0998 Tripterygium wilfordii
unitig_32.g10947 Utricularia gibba
vmacro04648 Vaccinium macrocarpon
VMungo0647G1715 Vigna mungo
VMungo1309G0838 Vigna mungo
VMungo1309G1101 Vigna mungo
Zm00001eb181960 Zea mays
Zm00001eb243450 Zea mays

User provided reference genes

Program Settings