Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p35790 Brassica napus
A09p66600 Brassica napus
A10p05630 Brassica napus
Aa31LG1G6350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3149 Anthoceros agrestis
Actinidia32630 Actinidia chinensis
Actinidia32631 Actinidia chinensis
Ah.01g002410 Amaranthus hybridus
AL1G17230 Arabidopsis lyrata
Aqoxy4G02458 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.99UL3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H173G9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UVU1B7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0JIV8 Arachis hypogaea
AT1G07110 Arabidopsis thaliana
ATR0681G099 Amborella trichopoda
Atru.chr3.4168 Acer truncatum
AUR62025049 Chenopodium quinoa
AUR62041217 Chenopodium quinoa
BcaB01g02467 Brassica carinata
BcaB02g06745 Brassica carinata
BcaB02g06747 Brassica carinata
BcaB03g13407 Brassica carinata
BcaC05g24676 Brassica carinata
BcaC07g42027 Brassica carinata
BcaC07g42443 Brassica carinata
BcaC07g42444 Brassica carinata
BolC5t29289H Brassica oleracea
BolC8t47077H Brassica oleracea
BolC8t52609H Brassica oleracea
BraA08t35486Z Brassica rapa
BraA09t42000Z Brassica rapa
BraA10t42824Z Brassica rapa
C05p05170 Brassica napus
C08p02820 Brassica napus
C08p50810 Brassica napus
CAN.G1095.9 Capsicum annuum
CANSAT54G2389 Cannabis sativa
CARHR006800 Cardamine hirsuta
Carub.0001s0639 Capsella rubella
Carub.0001s3494 Capsella rubella
Ca_05629_v3 Cicer arietinum L.
Ca_14964_v3 Cicer arietinum L.
Cc01_g14510 Coffea canephora
CDE06G0062 Ceratophyllum demersum
CDE12G0129 Ceratophyllum demersum
CDE12G0377 Ceratophyllum demersum
Cfa011730 Carpinus fangiana
Cfa024020 Carpinus fangiana
Cfa025454 Carpinus fangiana
Cfa026335 Carpinus fangiana
Ciclev10027872m.g Citrus clementina
CiPaw.13G074400 Carya illinoinensis
CiPaw.14G057100 Carya illinoinensis
ClCG02G019450 Citrullus lanatus
COL.COLO4_11092 Corchorus olitorius
COL.COLO4_33733 Corchorus olitorius
Cpa.g.sc2.426 Carica papaya
Cpa.g.sc2.427 Carica papaya
Cre16.g652150 Chlamydomonas reinhardtii
Cre16.g691888 Chlamydomonas reinhardtii
CsaV3_6G016080 Cucumis sativus L.
CSS0022626 Camellia sinensis var. sinensis
CSS0023090 Camellia sinensis var. sinensis
CSS0049027 Camellia sinensis var. sinensis
DCAR_007359 Daucus carota
Dinv07104 Davidia involucrata
Dinv09644 Davidia involucrata
Dinv28665 Davidia involucrata
Duzib150G1198 Durio zibethinus
Duzib168G0330 Durio zibethinus
ECA247G1043 Erigeron canadensis
ECA248G0301 Erigeron canadensis
EL10Ac9g22391 Beta vulgaris
Eucgr.J01899 Eucalyptus grandis
FAN21G3397 Fragaria x ananassa
FAN25G2774 Fragaria x ananassa
FvH4_3g39080 Fragaria vesca
Glyma.02G228700 Glycine max
Glyma.06G028800 Glycine max
Glyma.11G169700 Glycine max
Glyma.11G172200 Glycine max
Glyma.14G195700 Glycine max
Glyma.17G189950 Glycine max
Glyma.18G060600 Glycine max
Gohir.A03G028500 Gossypium hirsutum
Gohir.A07G160200 Gossypium hirsutum
Gohir.A10G178966 Gossypium hirsutum
Gohir.D03G140100 Gossypium hirsutum
Gorai.003G146900 Gossypium raimondii
GSVIVG01024699001 Vitis vinifera
HanXRQChr01g0011671 Helianthus annuus
HanXRQChr05g0144901 Helianthus annuus
HanXRQChr08g0229081 Helianthus annuus
HanXRQChr08g0229151 Helianthus annuus
HanXRQChr10g0315241 Helianthus annuus
HanXRQChr16g0518361 Helianthus annuus
Haze_24369 Corylus avellana
Haze_27150 Corylus avellana
Hma1.2p1_0223F.1_g094300 Hydrangea macrophylla
Hma1.2p1_1747F.1_g300540 Hydrangea macrophylla
Hma1.2p1_1981F.1_g309920 Hydrangea macrophylla
HPP92_006766 Vanilla planifolia
HPP92_006767 Vanilla planifolia
HPP92_013781 Vanilla planifolia
Hund08127 Selenicereus undatus
Lalb_Chr15g0083041 Lupinus albus
Lalb_Chr17g0345221 Lupinus albus
Lj1A130T38 Lonicera japonica
Lj2A1086G63 Lonicera japonica
Lj2A1086T64 Lonicera japonica
Lj6g0001244 Lotus japonicus
LjContig00141g0002673 Lotus japonicus
Lsat_1_v5_gn_5_172641 Lactuca sativa
Lsat_1_v5_gn_9_19140 Lactuca sativa
Manes.18G141800 Manihot esculenta
Mapoly0056s0097 Marchantia polymorpha
MBI15_g21757_MAGBIO Magnolia biondii
MBI15_g29380_MAGBIO Magnolia biondii
MCO01G554 Micromonas commoda
MCO04G290 Micromonas commoda
MD03G1064800 Malus domestica
MD03G1179800 Malus domestica
MD11G1068700 Malus domestica
MD11G1068800 Malus domestica
Medtr3g464770 Medicago truncatula
Medtr5g071900 Medicago truncatula
Medtr8g066450 Medicago truncatula
MELO3C026830.2 Cucumis melo
Migut.N00780 Erythranthe guttata
Migut.O00636 Erythranthe guttata
MSTRG.12679 Avicennia marina
MSTRG.17878 Avicennia marina
Nitab4.5_0000752g0070 Nicotiana tabacum
Nitab4.5_0000839g0080 Nicotiana tabacum
Nitab4.5_0002352g0010 Nicotiana tabacum
Nn2g10926 Nelumbo nucifera
Oeu051518.1 Olea europaea
Os03g0294200 Oryza sativa ssp. japonica
Os05g0164100 Oryza sativa ssp. japonica
Peaxi162Scf00540g00022 Petunia axillaris
PGR119G0996 Punica granatum
PGSC0003DMG400030370 Solanum tuberosum
Phvul.006G069900 Phaseolus vulgaris
Phvul.008G259400 Phaseolus vulgaris
Potri.001G279100 Populus trichocarpa
Potri.009G073800 Populus trichocarpa
Pp3c16_2340 Physcomitrium patens
Pp3c19_20300 Physcomitrium patens
Pp3c21_10950 Physcomitrium patens
Pp3c25_1530 Physcomitrium patens
PRCOL_00004422 Prasinoderma coloniale
PRCOL_00005130 Prasinoderma coloniale
Prupe.6G053800 Prunus persica
Psat2g055960 Pisum sativum
Psat5g157680 Pisum sativum
PSO017G4706 Papaver somniferum
PSO170G0130 Papaver somniferum
PSO302G0047 Papaver somniferum
QL01p039122 Quercus lobata
QL11p027666 Quercus lobata
RcHm_v2.0_Chr5g0070401 Rosa chinensis
Rhsim13G0067500 Rhododendron simsii
Sabra09G0055800 Salix brachista
SalBow2G2371 Salvia bowleyana
Sc21g0000200 Simmondsia chinensis
Sed0000995 Sechium edule
SEGI_02687 Sequoiadendron giganteum
SEGI_03083 Sequoiadendron giganteum
SEGI_07736 Sequoiadendron giganteum
SEGI_19911 Sequoiadendron giganteum
SEGI_20353 Sequoiadendron giganteum
SEGI_24147 Sequoiadendron giganteum
SEGI_28657 Sequoiadendron giganteum
SEGI_30930 Sequoiadendron giganteum
SEGI_31563 Sequoiadendron giganteum
SEGI_40801 Sequoiadendron giganteum
SEGI_41300 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32908 Striga asiatica
SGA_v2.0_scaffold146G36142 Striga asiatica
SMO174G0065 Selaginella moellendorffii
SMO244G0010 Selaginella moellendorffii
Solyc06g082150.4 Solanum lycopersicum
Sopen06g033530 Solanum pennellii
Sp1g05820 Schrenkiella parvula
Sp1g05830 Schrenkiella parvula
TAR623G0703 Trochodendron aralioides
TAR633G0774 Trochodendron aralioides
TAR636G0028 Trochodendron aralioides
TAR636G3324 Trochodendron aralioides
THA.LOC104800751 Tarenaya hassleriana
THA.LOC104815810 Tarenaya hassleriana
Thecc.09G352300 Theobroma cacao
Thhalv10006901m.g Eutrema salsugineum
TPR.G10945 Trifolium pratense
TPR.G13719 Trifolium pratense
TPR.G32920 Trifolium pratense
TPR.G5069 Trifolium pratense
TWI31G0289 Tripterygium wilfordii
TWI79G1066 Tripterygium wilfordii
unitig_60.g25551 Utricularia gibba
unitig_60.g25552 Utricularia gibba
vmacro02947 Vaccinium macrocarpon
VMungo0540G1658 Vigna mungo
Zm00001eb013550 Zea mays
Zm00001eb282250 Zea mays

User provided reference genes

Program Settings