Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00090 Brassica napus
A04p15910 Brassica napus
A08p24020 Brassica napus
Aa31LG6G16430 Aethionema arabicum
Aa31LG7G15540 Aethionema arabicum
Actinidia00597 Actinidia chinensis
AL4G10230 Arabidopsis lyrata
AL7G10640 Arabidopsis lyrata
Aqoxy5G01798 Aquilegia oxysepala
Aqoxy5G01799 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6SU9IG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M74JA5 Arachis hypogaea
AT2G21140 Arabidopsis thaliana
AT4G38770 Arabidopsis thaliana
ATR0810G037 Amborella trichopoda
Atru.chr5.3229 Acer truncatum
Atru.chr5.3230 Acer truncatum
AUR62010091 Chenopodium quinoa
AUR62013087 Chenopodium quinoa
BcaB03g12224 Brassica carinata
BcaC01g00253 Brassica carinata
BcaNung01299 Brassica carinata
BolC1t00017H Brassica oleracea
BolC3t19984H Brassica oleracea
BolC4t26634H Brassica oleracea
BraA01t00013Z Brassica rapa
BraA08t34359Z Brassica rapa
C01p00120 Brassica napus
C03p77310 Brassica napus
C04p50360 Brassica napus
CAN.G104.8 Capsicum annuum
CAN.G588.28 Capsicum annuum
CANSAT25G1598 Cannabis sativa
CARHR111970 Cardamine hirsuta
CARHR294460 Cardamine hirsuta
Carub.0004s0016 Capsella rubella
Carub.0007s0062 Capsella rubella
Ca_19004_v3 Cicer arietinum L.
Cc02_g16490 Coffea canephora
Cc02_g16500 Coffea canephora
CDE08G0629 Ceratophyllum demersum
Cfa005186 Carpinus fangiana
Ciclev10028101m.g Citrus clementina
Ciclev10029326m.g Citrus clementina
Ciclev10029494m.g Citrus clementina
CiPaw.05G077500 Carya illinoinensis
CiPaw.06G125100 Carya illinoinensis
ClCG00G004470 Citrullus lanatus
ClCG02G004300 Citrullus lanatus
ClCG02G011360 Citrullus lanatus
ClCG02G011540 Citrullus lanatus
COL.COLO4_17258 Corchorus olitorius
Cpa.g.sc37.189 Carica papaya
CsaV3_2G015730 Cucumis sativus L.
CSS0033713 Camellia sinensis var. sinensis
CSS0038966 Camellia sinensis var. sinensis
DCAR_003701 Daucus carota
DCAR_003702 Daucus carota
DCAR_003704 Daucus carota
DCAR_022953 Daucus carota
Dinv04967 Davidia involucrata
Duzib052G0176 Durio zibethinus
Duzib099G0001 Durio zibethinus
Duzib132G0547 Durio zibethinus
Duzib248G1175 Durio zibethinus
ECA234G1895 Erigeron canadensis
ECA246G0279 Erigeron canadensis
EL10Ac9g21436 Beta vulgaris
Eucgr.I01377 Eucalyptus grandis
Eucgr.L01869 Eucalyptus grandis
FAN15G0502 Fragaria x ananassa
FAN20G1603 Fragaria x ananassa
FAN24G0785 Fragaria x ananassa
FAN27G1129 Fragaria x ananassa
FvH4_2g01970 Fragaria vesca
Glyma.04G005400 Glycine max
Gohir.A01G164100 Gossypium hirsutum
Gohir.A04G122900 Gossypium hirsutum
Gohir.D01G156000 Gossypium hirsutum
Gohir.D04G164900 Gossypium hirsutum
Gorai.002G193500 Gossypium raimondii
Gorai.012G153300 Gossypium raimondii
GSVIVG01024076001 Vitis vinifera
GSVIVG01024079001 Vitis vinifera
GSVIVG01024081001 Vitis vinifera
HanXRQChr07g0186871 Helianthus annuus
HanXRQChr10g0289061 Helianthus annuus
HanXRQChr10g0290731 Helianthus annuus
HanXRQChr10g0294871 Helianthus annuus
HanXRQChr10g0294881 Helianthus annuus
Haze_02195 Corylus avellana
Hma1.2p1_4000F.1_g338120 Hydrangea macrophylla
HPP92_022646 Vanilla planifolia
Hund00043 Selenicereus undatus
Lalb_Chr01g0001331 Lupinus albus
Lalb_Chr03g0024711 Lupinus albus
Lj3g0005308 Lotus japonicus
Lj5A184G34 Lonicera japonica
Lj9A389T67 Lonicera japonica
Lsat_1_v5_gn_3_45680 Lactuca sativa
Lsat_1_v5_gn_4_74680 Lactuca sativa
Manes.11G090200 Manihot esculenta
MBI05_g25817_MAGBIO Magnolia biondii
MBI05_g26896_MAGBIO Magnolia biondii
MBI05_g26897_MAGBIO Magnolia biondii
MBI05_g46239_MAGBIO Magnolia biondii
MBI09_g00986_MAGBIO Magnolia biondii
MD05G1116400 Malus domestica
MD10G1118600 Malus domestica
Medtr4g075333 Medicago truncatula
MELO3C013376.2 Cucumis melo
MELO3C020785.2 Cucumis melo
MSTRG.16857 Avicennia marina
MSTRG.20036 Avicennia marina
MSTRG.5426 Avicennia marina
Nitab4.5_0000283g0120 Nicotiana tabacum
Nitab4.5_0000956g0190 Nicotiana tabacum
Nitab4.5_0000980g0220 Nicotiana tabacum
Nitab4.5_0013889g0010 Nicotiana tabacum
Nn1g05901 Nelumbo nucifera
Nn5g29097 Nelumbo nucifera
Oeu008607.1 Olea europaea
Oeu008608.1 Olea europaea
Oeu010052.1 Olea europaea
Oeu010053.1 Olea europaea
Oeu046127.1 Olea europaea
Os03g0245200 Oryza sativa ssp. japonica
Os03g0245300 Oryza sativa ssp. japonica
Os07g0484900 Oryza sativa ssp. japonica
Os10g0148100 Oryza sativa ssp. japonica
Os10g0148700 Oryza sativa ssp. japonica
Os10g0149000 Oryza sativa ssp. japonica
Os10g0149100 Oryza sativa ssp. japonica
Os10g0149200 Oryza sativa ssp. japonica
Os10g0149400 Oryza sativa ssp. japonica
Os10g0149800 Oryza sativa ssp. japonica
Os10g0150000 Oryza sativa ssp. japonica
Os10g0150300 Oryza sativa ssp. japonica
Os10g0150400 Oryza sativa ssp. japonica
Os10g0150600 Oryza sativa ssp. japonica
Os10g0150700 Oryza sativa ssp. japonica
Os10g0150800 Oryza sativa ssp. japonica
Peaxi162Scf00362g00962 Petunia axillaris
Peaxi162Scf00538g00520 Petunia axillaris
PGR042G2254 Punica granatum
PGSC0003DMG400001243 Solanum tuberosum
PGSC0003DMG400001631 Solanum tuberosum
PGSC0003DMG400004441 Solanum tuberosum
Phvul.009G024900 Phaseolus vulgaris
Phvul.011G026700 Phaseolus vulgaris
Potri.004G168600 Populus trichocarpa
Potri.009G129900 Populus trichocarpa
Prupe.8G160900 Prunus persica
Psat7g138320 Pisum sativum
PSO170G2430 Papaver somniferum
PSO700G0002 Papaver somniferum
QL04p026366 Quercus lobata
QL04p095545 Quercus lobata
QL05p072824 Quercus lobata
QL09p030113 Quercus lobata
QL11p047628 Quercus lobata
RcHm_v2.0_Chr6g0245161 Rosa chinensis
Rhsim05G0063000 Rhododendron simsii
Rhsim11G0187900 Rhododendron simsii
Sabra04G0113000 Salix brachista
Sabra09G0099300 Salix brachista
SalBow3G2231 Salvia bowleyana
SalBow6G2103 Salvia bowleyana
SalBow6G3538 Salvia bowleyana
Sc08g0003160 Simmondsia chinensis
Sed0012527 Sechium edule
Sed0022693 Sechium edule
SEGI_31467 Sequoiadendron giganteum
SGA_v2.0_scaffold207G41882 Striga asiatica
SGA_v2.0_scaffold32G13229 Striga asiatica
SGA_v2.0_scaffold58G20458 Striga asiatica
Solyc10g054900.2 Solanum lycopersicum
Sopen01g053220 Solanum pennellii
Sopen10g024820 Solanum pennellii
Sopen10g024830 Solanum pennellii
Sopen10g024840 Solanum pennellii
Sp4g00290 Schrenkiella parvula
Sp7g37040 Schrenkiella parvula
TAR376G0773 Trochodendron aralioides
TAR628G0207 Trochodendron aralioides
THA.LOC104807787 Tarenaya hassleriana
THA.LOC104824774 Tarenaya hassleriana
Thecc.02G066700 Theobroma cacao
Thhalv10000244m.g Eutrema salsugineum
Thhalv10025123m.g Eutrema salsugineum
TPR.G17164 Trifolium pratense
TWI75G0647 Tripterygium wilfordii
TWI79G0740 Tripterygium wilfordii
unitig_0.g832 Utricularia gibba
unitig_21.g20802 Utricularia gibba
unitig_37.g12824 Utricularia gibba
unitig_60.g25871 Utricularia gibba
unitig_744.g24265 Utricularia gibba
vmacro02251 Vaccinium macrocarpon
vmacro17380 Vaccinium macrocarpon
VMungo1309G0179 Vigna mungo
Zm00001eb010490 Zea mays
Zm00001eb026460 Zea mays
Zm00001eb026500 Zea mays
Zm00001eb026530 Zea mays
Zm00001eb398790 Zea mays

User provided reference genes

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