Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p37070 Brassica napus
A09p45700 Brassica napus
Aa31LG10G7680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.817 Anthoceros agrestis
Actinidia05415 Actinidia chinensis
Ah.15g090710 Amaranthus hybridus
AL5G33390 Arabidopsis lyrata
Aqoxy2G01092 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33QXTL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3HD1EN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AZ092E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F1289G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYHZ2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q0CWXY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZQ0IV1 Arachis hypogaea
AT3G52610 Arabidopsis thaliana
ATR0820G118 Amborella trichopoda
Atru.chr8.1472 Acer truncatum
Atru.chr8.1473 Acer truncatum
AUR62006202 Chenopodium quinoa
AUR62037016 Chenopodium quinoa
BcaB01g00353 Brassica carinata
BcaC01g06156 Brassica carinata
BcaC07g39630 Brassica carinata
BolC8t50405H Brassica oleracea
BraA09t40031Z Brassica rapa
C03p18630 Brassica napus
C04p53000 Brassica napus
C08p27900 Brassica napus
CAN.G334.11 Capsicum annuum
CAN.G397.69 Capsicum annuum
CAN.G78.106 Capsicum annuum
CANSAT64G2227 Cannabis sativa
CARHR162430 Cardamine hirsuta
Carub.0005s1903 Capsella rubella
Ca_00893_v3 Cicer arietinum L.
Ca_08899_v3 Cicer arietinum L.
Ca_09017_v3 Cicer arietinum L.
Cc06_g06030 Coffea canephora
Cc06_g06050 Coffea canephora
CDE06G0320 Ceratophyllum demersum
CDE08G1063 Ceratophyllum demersum
Cfa016627 Carpinus fangiana
Cfa016628 Carpinus fangiana
Cfa016629 Carpinus fangiana
Ciclev10011628m.g Citrus clementina
Ciclev10011692m.g Citrus clementina
CiPaw.09G015800 Carya illinoinensis
CiPaw.09G015900 Carya illinoinensis
CiPaw.10G010700 Carya illinoinensis
ClCG10G018820 Citrullus lanatus
ClCG10G018830 Citrullus lanatus
COL.COLO4_09760 Corchorus olitorius
COL.COLO4_29696 Corchorus olitorius
COL.COLO4_29697 Corchorus olitorius
Cpa.g.sc104.111 Carica papaya
Cpa.g.sc104.112 Carica papaya
CsaV3_3G037400 Cucumis sativus L.
CsaV3_3G037410 Cucumis sativus L.
CSS0011107 Camellia sinensis var. sinensis
CSS0018589 Camellia sinensis var. sinensis
CSS0033394 Camellia sinensis var. sinensis
DCAR_013404 Daucus carota
Dinv21187 Davidia involucrata
Dinv31702 Davidia involucrata
Duzib093G0087 Durio zibethinus
Duzib093G1779 Durio zibethinus
Duzib106G1259 Durio zibethinus
Duzib106G1624 Durio zibethinus
Duzib128G0984 Durio zibethinus
ECA246G1476 Erigeron canadensis
ECA246G4112 Erigeron canadensis
ECA248G0622 Erigeron canadensis
EL10Ac7g16898 Beta vulgaris
Eucgr.A02649 Eucalyptus grandis
FAN02G1791 Fragaria x ananassa
FAN05G4850 Fragaria x ananassa
FAN09G2352 Fragaria x ananassa
FAN09G2679 Fragaria x ananassa
FAN14G0655 Fragaria x ananassa
FvH4_6g19190 Fragaria vesca
Glyma.02G202000 Glycine max
Glyma.02G202100 Glycine max
Glyma.10G074600 Glycine max
Glyma.10G074700 Glycine max
Gohir.A04G065100 Gossypium hirsutum
Gohir.A09G140100 Gossypium hirsutum
Gohir.A09G140200 Gossypium hirsutum
Gohir.D04G098600 Gossypium hirsutum
Gohir.D09G134300 Gossypium hirsutum
Gohir.D09G134400 Gossypium hirsutum
Gorai.006G154100 Gossypium raimondii
Gorai.006G154200 Gossypium raimondii
Gorai.009G400800 Gossypium raimondii
GSVIVG01033869001 Vitis vinifera
GSVIVG01033870001 Vitis vinifera
HanXRQChr01g0010071 Helianthus annuus
HanXRQChr01g0010081 Helianthus annuus
HanXRQChr09g0260051 Helianthus annuus
HanXRQChr13g0388791 Helianthus annuus
HanXRQChr17g0542701 Helianthus annuus
Haze_19632 Corylus avellana
HPP92_011906 Vanilla planifolia
HPP92_013813 Vanilla planifolia
Hund19910 Selenicereus undatus
Lalb_Chr01g0018091 Lupinus albus
Lalb_Chr02g0154851 Lupinus albus
Lj1g0022515 Lotus japonicus
Lj2A140T57 Lonicera japonica
Lj2C139T14 Lonicera japonica
Lj5g0008872 Lotus japonicus
Lsat_1_v5_gn_3_41420 Lactuca sativa
Lsat_1_v5_gn_3_41461 Lactuca sativa
Lsat_1_v5_gn_5_165181 Lactuca sativa
Manes.08G027000 Manihot esculenta
Mapoly0001s0257 Marchantia polymorpha
Mapoly0001s0549 Marchantia polymorpha
Mapoly0085s0083 Marchantia polymorpha
MBI17_g47234_MAGBIO Magnolia biondii
MD12G1027700 Malus domestica
MD12G1027900 Malus domestica
Medtr1g059760 Medicago truncatula
MELO3C009484.2 Cucumis melo
MELO3C009485.2 Cucumis melo
Migut.L01793 Erythranthe guttata
Migut.L01795 Erythranthe guttata
MSTRG.10376 Avicennia marina
MSTRG.26631 Avicennia marina
MSTRG.26632 Avicennia marina
Nitab4.5_0000692g0220 Nicotiana tabacum
Nn2g11539 Nelumbo nucifera
Nn2g14195 Nelumbo nucifera
Nn2g14197 Nelumbo nucifera
Nn6g34852 Nelumbo nucifera
Oeu047852.1 Olea europaea
Oeu047853.1 Olea europaea
Oeu056872.1 Olea europaea
Os01g0861900 Oryza sativa ssp. japonica
Peaxi162Scf00166g00126 Petunia axillaris
Peaxi162Scf00166g01214 Petunia axillaris
Peaxi162Scf00166g01215 Petunia axillaris
PGR004G0572 Punica granatum
PGSC0003DMG400008869 Solanum tuberosum
Phvul.007G226800 Phaseolus vulgaris
Phvul.007G226900 Phaseolus vulgaris
Potri.006G210800 Populus trichocarpa
Potri.006G210900 Populus trichocarpa
Potri.016G078000 Populus trichocarpa
Pp3c11_23550 Physcomitrium patens
Pp3c15_17540 Physcomitrium patens
Pp3c18_15210 Physcomitrium patens
Pp3c19_19870 Physcomitrium patens
Pp3c22_14270 Physcomitrium patens
Pp3c3_18850 Physcomitrium patens
Prupe.7G103700 Prunus persica
Prupe.7G103800 Prunus persica
Prupe.7G103900 Prunus persica
Psat3g031960 Pisum sativum
Psat6g079680 Pisum sativum
Psat6g079760 Pisum sativum
PSO339G5731 Papaver somniferum
PSO801G0276 Papaver somniferum
QL07p038545 Quercus lobata
QL07p038568 Quercus lobata
QL07p038577 Quercus lobata
RcHm_v2.0_Chr3g0474311 Rosa chinensis
Rhsim03G0073900 Rhododendron simsii
Sabra06G0162300 Salix brachista
Sabra06G0162400 Salix brachista
Sabra16G0082500 Salix brachista
SalBow3G0879 Salvia bowleyana
SalBow5G0001 Salvia bowleyana
SalBow5G0700 Salvia bowleyana
SalBow5G2270 Salvia bowleyana
SalBow5G3316 Salvia bowleyana
Sc02g0000360 Simmondsia chinensis
Sed0024944 Sechium edule
Sed0025091 Sechium edule
SEGI_00226 Sequoiadendron giganteum
SEGI_02887 Sequoiadendron giganteum
SEGI_22453 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06704 Striga asiatica
SGA_v2.0_scaffold184G39973 Striga asiatica
SMO148G0002 Selaginella moellendorffii
SMO351G0154 Selaginella moellendorffii
Solyc09g009990.4 Solanum lycopersicum
Sopen09g004740 Solanum pennellii
Sp5g09680 Schrenkiella parvula
TAR633G2357 Trochodendron aralioides
THA.LOC104799759 Tarenaya hassleriana
Thecc.05G091900 Theobroma cacao
Thecc.05G092000 Theobroma cacao
Thhalv10010329m.g Eutrema salsugineum
TPR.G14767 Trifolium pratense
TPR.G14768 Trifolium pratense
TPR.G23320 Trifolium pratense
TPR.G28323 Trifolium pratense
TPR.G40341 Trifolium pratense
TPR.G882 Trifolium pratense
TWI53G0128 Tripterygium wilfordii
TWI53G1850 Tripterygium wilfordii
unitig_578.g16017 Utricularia gibba
unitig_8.g4040 Utricularia gibba
vmacro07420 Vaccinium macrocarpon
VMungo0720G0194 Vigna mungo
VMungo0720G2613 Vigna mungo
Zm00001eb366820 Zea mays

User provided reference genes

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