Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23720 Brassica napus
A03p04940 Brassica napus
A10p26440 Brassica napus
Aa31LG3G15910 Aethionema arabicum
Aa31LG4G490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3014 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2366 Anthoceros agrestis
Actinidia13249 Actinidia chinensis
Actinidia15997 Actinidia chinensis
Actinidia22360 Actinidia chinensis
Ah.12g064040 Amaranthus hybridus
AL2G41310 Arabidopsis lyrata
AL6G21910 Arabidopsis lyrata
Aqoxy7G02100 Aquilegia oxysepala
Aqoxy7G03733 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.83LFDZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CWZP7X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJG6PN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M6130S Arachis hypogaea
AT1G80200 Arabidopsis thaliana
AT5G11280 Arabidopsis thaliana
ATR1156G058 Amborella trichopoda
Atru.chr1.3071 Acer truncatum
Atru.chr7.2388 Acer truncatum
AUR62011554 Chenopodium quinoa
AUR62016373 Chenopodium quinoa
AUR62024894 Chenopodium quinoa
AUR62030643 Chenopodium quinoa
BcaB01g06290 Brassica carinata
BcaB01g06298 Brassica carinata
BcaB01g06323 Brassica carinata
BcaB05g25287 Brassica carinata
BcaB05g25288 Brassica carinata
BcaB08g37075 Brassica carinata
BcaC02g10780 Brassica carinata
BcaC03g15993 Brassica carinata
BcaC04g19244 Brassica carinata
BolC4t24019H Brassica oleracea
BolC9t59382H Brassica oleracea
BraA02t07365Z Brassica rapa
BraA03t09832Z Brassica rapa
BraA10t44701Z Brassica rapa
C02p37480 Brassica napus
C04p25150 Brassica napus
C09p65610 Brassica napus
CAN.G340.3 Capsicum annuum
CANSAT56G3409 Cannabis sativa
CANSAT64G2029 Cannabis sativa
CARHR074280 Cardamine hirsuta
CARHR201980 Cardamine hirsuta
Carub.0002s2732 Capsella rubella
Carub.0006s0975 Capsella rubella
Ca_15721_v3 Cicer arietinum L.
CBR_g49784 Chara braunii
Cc08_g00960 Coffea canephora
CDE05G1646 Ceratophyllum demersum
CDE05G2985 Ceratophyllum demersum
Ciclev10009474m.g Citrus clementina
Ciclev10026958m.g Citrus clementina
Ciclev10027078m.g Citrus clementina
Ciclev10027228m.g Citrus clementina
Ciclev10027336m.g Citrus clementina
CiPaw.01G244800 Carya illinoinensis
CiPaw.08G012800 Carya illinoinensis
ClCG08G013220 Citrullus lanatus
ClCG09G002740 Citrullus lanatus
COL.COLO4_00194 Corchorus olitorius
COL.COLO4_12906 Corchorus olitorius
Cpa.g.sc10.225 Carica papaya
Cpa.g.sc533.1 Carica papaya
CsaV3_2G031950 Cucumis sativus L.
CsaV3_7G032600 Cucumis sativus L.
CSS0039322 Camellia sinensis var. sinensis
CSS0042620 Camellia sinensis var. sinensis
DCAR_006232 Daucus carota
DCAR_016254 Daucus carota
Dinv30167 Davidia involucrata
Dinv38100 Davidia involucrata
Duzib168G0888 Durio zibethinus
Duzib235G1292 Durio zibethinus
ECA234G0613 Erigeron canadensis
ECA246G0415 Erigeron canadensis
EL10Ac2g02608 Beta vulgaris
EL10Ac9g21935 Beta vulgaris
Eucgr.C00336 Eucalyptus grandis
Eucgr.C02806 Eucalyptus grandis
Eucgr.F02546 Eucalyptus grandis
Eucgr.I00800 Eucalyptus grandis
Eucgr.J01775 Eucalyptus grandis
FAN20G0011 Fragaria x ananassa
FAN27G1304 Fragaria x ananassa
FvH4_2g29460 Fragaria vesca
FvH4_6g30260 Fragaria vesca
Glyma.04G068100 Glycine max
Glyma.06G069800 Glycine max
Glyma.07G032100 Glycine max
Gohir.A08G236700 Gossypium hirsutum
Gohir.A10G076100 Gossypium hirsutum
Gohir.D08G257300 Gossypium hirsutum
Gohir.D10G075451 Gossypium hirsutum
Gorai.004G274300 Gossypium raimondii
Gorai.011G081400 Gossypium raimondii
GSVIVG01035826001 Vitis vinifera
HanXRQChr08g0234811 Helianthus annuus
HanXRQChr10g0303091 Helianthus annuus
Hma1.2p1_0000F.1_g000400 Hydrangea macrophylla
Hma1.2p1_0515F.1_g170230 Hydrangea macrophylla
HPP92_023167 Vanilla planifolia
Hund20355 Selenicereus undatus
Lalb_Chr01g0012301 Lupinus albus
Lalb_Chr01g0012311 Lupinus albus
Lalb_Chr01g0012491 Lupinus albus
Lalb_Chr08g0243991 Lupinus albus
Lalb_Chr23g0268741 Lupinus albus
Lj1g0001911 Lotus japonicus
Lj3g0010686 Lotus japonicus
Lj4g0012531 Lotus japonicus
Lj8A668G29 Lonicera japonica
Lj8A679G18 Lonicera japonica
Lj9A502G37 Lonicera japonica
Lsat_1_v5_gn_5_132480 Lactuca sativa
Lsat_1_v5_gn_5_30500 Lactuca sativa
Manes.03G016900 Manihot esculenta
Manes.11G053300 Manihot esculenta
Mapoly0024s0030 Marchantia polymorpha
Mapoly0048s0064 Marchantia polymorpha
MD13G1228200 Malus domestica
MD15G1123100 Malus domestica
MD16G1235400 Malus domestica
MD17G1206100 Malus domestica
Medtr3g107550 Medicago truncatula
Medtr4g011110 Medicago truncatula
MELO3C011249.2 Cucumis melo
MELO3C029252.2 Cucumis melo
Migut.E01788 Erythranthe guttata
Migut.I00799 Erythranthe guttata
MSTRG.1714 Avicennia marina
MSTRG.25996 Avicennia marina
Nitab4.5_0000268g0060 Nicotiana tabacum
Nitab4.5_0000447g0060 Nicotiana tabacum
Nitab4.5_0002257g0020 Nicotiana tabacum
Nitab4.5_0006574g0030 Nicotiana tabacum
Nn2g11966 Nelumbo nucifera
Nn8g39390 Nelumbo nucifera
Oeu006259.1 Olea europaea
Oeu024202.1 Olea europaea
Oeu031686.1 Olea europaea
Oeu038358.1 Olea europaea
Os01g0555300 Oryza sativa ssp. japonica
Peaxi162Scf00274g00860 Petunia axillaris
Peaxi162Scf00603g00012 Petunia axillaris
PGR044G1059 Punica granatum
PGR102G3177 Punica granatum
PGSC0003DMG400017130 Solanum tuberosum
PGSC0003DMG401000630 Solanum tuberosum
Phvul.009G094400 Phaseolus vulgaris
Phvul.010G153900 Phaseolus vulgaris
Potri.006G251600 Populus trichocarpa
Prupe.1G478100 Prunus persica
Psat5g028480 Pisum sativum
Psat7g255680 Pisum sativum
PSO210G5012 Papaver somniferum
PSO210G7678 Papaver somniferum
QL05p027917 Quercus lobata
RcHm_v2.0_Chr2g0136501 Rosa chinensis
RcHm_v2.0_Chr6g0298251 Rosa chinensis
Rhsim02G0195600 Rhododendron simsii
Rhsim02G0198400 Rhododendron simsii
Rhsim07G0181000 Rhododendron simsii
Sabra03G0036000 Salix brachista
Sabra06G0196600 Salix brachista
SalBow1G3705 Salvia bowleyana
SalBow2G1656 Salvia bowleyana
Sc09g0008410 Simmondsia chinensis
Sc10g0005730 Simmondsia chinensis
Sed0002484 Sechium edule
Sed0025998 Sechium edule
Sed0026368 Sechium edule
SEGI_05060 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09143 Striga asiatica
SGA_v2.0_scaffold64G21909 Striga asiatica
SHI19285 Sapria himalayana
SMO304G0046 Selaginella moellendorffii
SMO358G0079 Selaginella moellendorffii
Solyc03g116470.2 Solanum lycopersicum
Solyc06g036520.1 Solanum lycopersicum
Solyc06g036540.1 Solanum lycopersicum
Sopen03g035360 Solanum pennellii
Sopen06g012300 Solanum pennellii
Sp6g32280 Schrenkiella parvula
TAR636G1230 Trochodendron aralioides
THA.LOC104799228 Tarenaya hassleriana
Thecc.06G005900 Theobroma cacao
Thecc.06G071200 Theobroma cacao
Thhalv10014677m.g Eutrema salsugineum
Thhalv10019167m.g Eutrema salsugineum
TPR.G31761 Trifolium pratense
TPR.G31765 Trifolium pratense
TPR.G38660 Trifolium pratense
TWI18G1198 Tripterygium wilfordii
TWI34G1555 Tripterygium wilfordii
TWI63G1648 Tripterygium wilfordii
vmacro11152 Vaccinium macrocarpon
VMungo0331G0053 Vigna mungo
VMungo1309G1624 Vigna mungo
Zm00001eb162550 Zea mays
Zm00001eb342310 Zea mays

User provided reference genes

Program Settings